RNA–Protein interactions for RNA: ENST00000359128.9

NLRC3-202, Transcript of NLR family CARD domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NLRC3, Length 6,401 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NLRC3-202ENST00000359128 TTC30BQ8N4P2 665 aa14.08□□□□□ -0.16
NLRC3-202ENST00000359128 DPH5Q9H2P9 285 aa14.08□□□□□ -0.16
NLRC3-202ENST00000359128 PTPN22Q9Y2R2 807 aa14.08□□□□□ -0.16
NLRC3-202ENST00000359128 USP6P35125 1406 aa14.08□□□□□ -0.16
NLRC3-202ENST00000359128 PRKAB2O43741 272 aa14.08□□□□□ -0.16
NLRC3-202ENST00000359128 BUB1BO60566 1050 aaPredicted RBP14.08□□□□□ -0.16
NLRC3-202ENST00000359128 GH2P01242 217 aa14.08□□□□□ -0.16
NLRC3-202ENST00000359128 TNFAIP2Q03169 654 aa14.08□□□□□ -0.16
NLRC3-202ENST00000359128 OR6B3Q8NGW1 331 aa14.08□□□□□ -0.16
NLRC3-202ENST00000359128 CARMIL3Q8ND23 1372 aa14.08□□□□□ -0.16
NLRC3-202ENST00000359128 SASH1O94885 1247 aa14.07□□□□□ -0.16
NLRC3-202ENST00000359128 CPP00450 1065 aa14.07□□□□□ -0.16
NLRC3-202ENST00000359128 DDIT3P35638 169 aa14.07□□□□□ -0.16
NLRC3-202ENST00000359128 FAM83BQ5T0W9 1011 aa14.07□□□□□ -0.16
NLRC3-202ENST00000359128 PPARGP37231 505 aaPredicted RBP14.07□□□□□ -0.16
NLRC3-202ENST00000359128 MAP3K21Q5TCX8 1036 aa14.07□□□□□ -0.16
NLRC3-202ENST00000359128 FAM167AQ96KS9 214 aa14.07□□□□□ -0.16
NLRC3-202ENST00000359128 PARVGQ9HBI0 331 aa14.07□□□□□ -0.16
NLRC3-202ENST00000359128 RAVER2Q9HCJ3 691 aaKnown RBP14.07□□□□□ -0.16
NLRC3-202ENST00000359128 SHROOM2Q13796 1616 aa14.07□□□□□ -0.16
NLRC3-202ENST00000359128 PRPSAP2O60256 369 aa14.07□□□□□ -0.16
NLRC3-202ENST00000359128 RECQLP46063 649 aaPredicted RBP14.07□□□□□ -0.16
NLRC3-202ENST00000359128 PDE1BQ01064 536 aa14.07□□□□□ -0.16
NLRC3-202ENST00000359128 TSPY1Q01534 308 aa14.07□□□□□ -0.16
NLRC3-202ENST00000359128 SLFN12LQ6IEE8 588 aa14.07□□□□□ -0.16
NLRC3-202ENST00000359128 LMNTD2Q8IXW0 634 aa14.07□□□□□ -0.16
NLRC3-202ENST00000359128 DDX55Q8NHQ9 600 aaKnown RBP eCLIP14.07□□□□□ -0.16
NLRC3-202ENST00000359128 TLR7Q9NYK1 1049 aaKnown RBP14.07□□□□□ -0.16
NLRC3-202ENST00000359128 ARHGAP42A6NI28 874 aa14.07□□□□□ -0.16
NLRC3-202ENST00000359128 INHBAP08476 426 aa14.07□□□□□ -0.16
NLRC3-202ENST00000359128 EN1Q05925 392 aaPredicted RBP14.07□□□□□ -0.16
NLRC3-202ENST00000359128 ARHGEF5Q12774 1597 aa14.07□□□□□ -0.16
NLRC3-202ENST00000359128 CLEC4GQ6UXB4 293 aa14.07□□□□□ -0.16
NLRC3-202ENST00000359128 AATKQ6ZMQ8 1374 aa14.07□□□□□ -0.16
NLRC3-202ENST00000359128 N4BP2L2Q92802 583 aaPredicted RBP14.07□□□□□ -0.16
NLRC3-202ENST00000359128 USP28Q96RU2 1077 aa14.07□□□□□ -0.16
NLRC3-202ENST00000359128 HECW2Q9P2P5 1572 aa14.07□□□□□ -0.16
NLRC3-202ENST00000359128 PRAMEF22A3QJZ6 481 aa14.07□□□□□ -0.16
NLRC3-202ENST00000359128 SPATA1Q5VX52 437 aa14.07□□□□□ -0.16
NLRC3-202ENST00000359128 DARS2Q6PI48 645 aaKnown RBP14.07□□□□□ -0.16
NLRC3-202ENST00000359128 SH3RF3Q8TEJ3 882 aaPredicted RBP14.07□□□□□ -0.16
NLRC3-202ENST00000359128 NVLO15381 856 aaKnown RBP14.06□□□□□ -0.16
NLRC3-202ENST00000359128 ALCAMQ13740 583 aa14.06□□□□□ -0.16
NLRC3-202ENST00000359128 RWDD4Q6NW29 188 aaKnown RBP14.06□□□□□ -0.16
NLRC3-202ENST00000359128 YAF2Q8IY57 180 aa14.06□□□□□ -0.16
NLRC3-202ENST00000359128 RPGRIP1Q96KN7 1286 aa14.06□□□□□ -0.16
NLRC3-202ENST00000359128 UBE2TQ9NPD8 197 aaPredicted RBP14.06□□□□□ -0.16
NLRC3-202ENST00000359128 HMGB1P1B2RPK0 211 aaPredicted RBP14.06□□□□□ -0.16
NLRC3-202ENST00000359128 CDR2Q01850 454 aa14.06□□□□□ -0.16
NLRC3-202ENST00000359128 SF3A3Q12874 501 aaKnown RBP eCLIP14.06□□□□□ -0.16
NLRC3-202ENST00000359128 SDCCAG3Q96C92 435 aa14.06□□□□□ -0.16
NLRC3-202ENST00000359128 DBNLQ9UJU6 430 aaKnown RBP14.06□□□□□ -0.16
NLRC3-202ENST00000359128 TTLL4Q14679 1199 aa14.06□□□□□ -0.16
NLRC3-202ENST00000359128 TWF2Q6IBS0 349 aaKnown RBP14.06□□□□□ -0.16
NLRC3-202ENST00000359128 GOLGA8QA0A0J9YX86 632 aa14.06□□□□□ -0.16
NLRC3-202ENST00000359128 GOLGA8OA6NCC3 632 aa14.06□□□□□ -0.16
NLRC3-202ENST00000359128 GOLGA8NF8WBI6 632 aa14.06□□□□□ -0.16
NLRC3-202ENST00000359128 RASSF2P50749 326 aa14.06□□□□□ -0.16
NLRC3-202ENST00000359128 CTTNQ14247 550 aaKnown RBP14.06□□□□□ -0.16
NLRC3-202ENST00000359128 LRRC41Q15345 812 aa14.06□□□□□ -0.16
NLRC3-202ENST00000359128 SNRNP48Q6IEG0 339 aaKnown RBP14.06□□□□□ -0.16
NLRC3-202ENST00000359128 BRINP3Q76B58 766 aa14.06□□□□□ -0.16
NLRC3-202ENST00000359128 OTUD5Q96G74 571 aa14.06□□□□□ -0.16
NLRC3-202ENST00000359128 MRPL47Q9HD33 250 aaKnown RBP14.06□□□□□ -0.16
NLRC3-202ENST00000359128 PHLPP2Q6ZVD8 1323 aa14.06□□□□□ -0.16
NLRC3-202ENST00000359128 K7ERI5 159 aa14.06□□□□□ -0.16
NLRC3-202ENST00000359128 SLC12A1Q13621 1099 aa14.06□□□□□ -0.16
NLRC3-202ENST00000359128 ZNF827Q17R98 1081 aa14.06□□□□□ -0.16
NLRC3-202ENST00000359128 PHKA2P46019 1235 aa14.05□□□□□ -0.16
NLRC3-202ENST00000359128 GTF2A1P52655 376 aaPredicted RBP14.05□□□□□ -0.16
NLRC3-202ENST00000359128 MTMR1Q13613 665 aa14.05□□□□□ -0.16
NLRC3-202ENST00000359128 ALKBH8Q96BT7 664 aaKnown RBP14.05□□□□□ -0.16
NLRC3-202ENST00000359128 LRGUKQ96M69 825 aa14.05□□□□□ -0.16
NLRC3-202ENST00000359128 LBHD1Q9BQE6 289 aaPredicted RBP14.05□□□□□ -0.16
NLRC3-202ENST00000359128 ATP6V0A4Q9HBG4 840 aa14.05□□□□□ -0.16
NLRC3-202ENST00000359128 MAP3K7O43318 606 aa14.05□□□□□ -0.16
NLRC3-202ENST00000359128 DYNLT1P63172 113 aa14.05□□□□□ -0.16
NLRC3-202ENST00000359128 WHAMMP3Q1A5X7 153 aa14.05□□□□□ -0.16
NLRC3-202ENST00000359128 SPON1Q9HCB6 807 aa14.05□□□□□ -0.16
NLRC3-202ENST00000359128 CLASP1Q7Z460 1538 aa14.05□□□□□ -0.16
NLRC3-202ENST00000359128 IGSF1Q8N6C5 1336 aa14.05□□□□□ -0.16
NLRC3-202ENST00000359128 OVOS2A0A0G2JMS6 1433 aa14.05□□□□□ -0.16
NLRC3-202ENST00000359128 OVOS2A0A0J9YW53 1432 aa14.05□□□□□ -0.16
NLRC3-202ENST00000359128 OVOS2Q6IE36 1432 aa14.05□□□□□ -0.16
NLRC3-202ENST00000359128 COPB1P53618 953 aaKnown RBP14.05□□□□□ -0.16
NLRC3-202ENST00000359128 TSNAXIP1Q2TAA8 658 aa14.05□□□□□ -0.16
NLRC3-202ENST00000359128 TDRD3Q9H7E2 651 aaKnown RBP14.05□□□□□ -0.16
NLRC3-202ENST00000359128 COL15A1P39059 1388 aa14.05□□□□□ -0.16
NLRC3-202ENST00000359128 ERBB3P21860 1342 aa14.05□□□□□ -0.16
NLRC3-202ENST00000359128 LRRN2O75325 713 aa14.05□□□□□ -0.16
NLRC3-202ENST00000359128 LDHAP00338 332 aaKnown RBP14.05□□□□□ -0.16
NLRC3-202ENST00000359128 CACNB3P54284 484 aa14.05□□□□□ -0.16
NLRC3-202ENST00000359128 FAM71BQ8TC56 605 aa14.05□□□□□ -0.16
NLRC3-202ENST00000359128 DHTKD1Q96HY7 919 aaPredicted RBP14.05□□□□□ -0.16
NLRC3-202ENST00000359128 TTC25Q96NG3 672 aa14.05□□□□□ -0.16
NLRC3-202ENST00000359128 PPP6R2O75170 966 aa14.05□□□□□ -0.16
NLRC3-202ENST00000359128 NDUFA8P51970 172 aa14.05□□□□□ -0.16
NLRC3-202ENST00000359128 ASPHQ12797 758 aa14.05□□□□□ -0.16
NLRC3-202ENST00000359128 COBLO75128 1261 aa14.04□□□□□ -0.16
NLRC3-202ENST00000359128 PLA2G4BP0C869 781 aa14.04□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms