RNA–Protein interactions for RNA: ENST00000358511.10

COL6A6-201, Transcript of collagen type VI alpha 6 chain, humanhuman

APPRIS P1 TSL 5 BASIC

Gene COL6A6, Length 9,581 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A6-201ENST00000358511 PDE1BQ01064 536 aa9.46□□□□□ -0.9
COL6A6-201ENST00000358511 MYL7Q01449 175 aa9.46□□□□□ -0.9
COL6A6-201ENST00000358511 SLC20A2Q08357 652 aa9.46□□□□□ -0.9
COL6A6-201ENST00000358511 IL17RAQ96F46 866 aa9.46□□□□□ -0.9
COL6A6-201ENST00000358511 TBC1D23Q9NUY8 699 aa9.46□□□□□ -0.9
COL6A6-201ENST00000358511 ZBBXA8MT70 800 aa9.46□□□□□ -0.9
COL6A6-201ENST00000358511 STX1BP61266 288 aa9.46□□□□□ -0.9
COL6A6-201ENST00000358511 CYP27A1Q02318 531 aa9.46□□□□□ -0.9
COL6A6-201ENST00000358511 PPP1R2P3Q6NXS1 205 aa9.46□□□□□ -0.9
COL6A6-201ENST00000358511 HPCAL4Q9UM19 191 aa9.46□□□□□ -0.9
COL6A6-201ENST00000358511 TRAF3IP3Q9Y228 551 aa9.46□□□□□ -0.9
COL6A6-201ENST00000358511 SMCO2A6NFE2 343 aa9.46□□□□□ -0.9
COL6A6-201ENST00000358511 MCF2LO15068 1137 aa9.46□□□□□ -0.9
COL6A6-201ENST00000358511 RNMTO43148 476 aaKnown RBP9.46□□□□□ -0.9
COL6A6-201ENST00000358511 MMP1P03956 469 aa9.46□□□□□ -0.9
COL6A6-201ENST00000358511 KCNA3P22001 575 aa9.46□□□□□ -0.9
COL6A6-201ENST00000358511 TTBK2Q6IQ55 1244 aa9.46□□□□□ -0.9
COL6A6-201ENST00000358511 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP9.46□□□□□ -0.9
COL6A6-201ENST00000358511 NLRP3Q96P20 1036 aa9.46□□□□□ -0.9
COL6A6-201ENST00000358511 DDX25Q9UHL0 483 aaKnown RBP9.46□□□□□ -0.9
COL6A6-201ENST00000358511 TSC22D4Q9Y3Q8 395 aa9.46□□□□□ -0.9
COL6A6-201ENST00000358511 CPP00450 1065 aa9.45□□□□□ -0.9
COL6A6-201ENST00000358511 FGAP02671 866 aa9.45□□□□□ -0.9
COL6A6-201ENST00000358511 LAMB3Q13751 1172 aa9.45□□□□□ -0.9
COL6A6-201ENST00000358511 ARMCX5Q6P1M9 558 aa9.45□□□□□ -0.9
COL6A6-201ENST00000358511 DCAF5Q96JK2 942 aa9.45□□□□□ -0.9
COL6A6-201ENST00000358511 MRPL40Q9NQ50 206 aaKnown RBP9.45□□□□□ -0.9
COL6A6-201ENST00000358511 DIAPH2O60879 1101 aa9.45□□□□□ -0.9
COL6A6-201ENST00000358511 PALMO75781 387 aa9.45□□□□□ -0.9
COL6A6-201ENST00000358511 KIF23Q02241 960 aaPredicted RBP9.45□□□□□ -0.9
COL6A6-201ENST00000358511 FAM26FQ5R3K3 315 aa9.45□□□□□ -0.9
COL6A6-201ENST00000358511 CENPUQ71F23 418 aa9.45□□□□□ -0.9
COL6A6-201ENST00000358511 FAM178BQ8IXR5 827 aa9.45□□□□□ -0.9
COL6A6-201ENST00000358511 PCDHA12Q9UN75 941 aa9.45□□□□□ -0.9
COL6A6-201ENST00000358511 AFPP02771 609 aaKnown RBP9.45□□□□□ -0.9
COL6A6-201ENST00000358511 MDH1P40925 334 aaKnown RBP9.45□□□□□ -0.9
COL6A6-201ENST00000358511 TMED10P49755 219 aaKnown RBP9.45□□□□□ -0.9
COL6A6-201ENST00000358511 STAT2P52630 851 aa9.45□□□□□ -0.9
COL6A6-201ENST00000358511 CEP19Q96LK0 163 aa9.45□□□□□ -0.9
COL6A6-201ENST00000358511 TRIM33Q9UPN9 1127 aa9.45□□□□□ -0.9
COL6A6-201ENST00000358511 TRPC6Q9Y210 931 aa9.45□□□□□ -0.9
COL6A6-201ENST00000358511 BICRAQ9NZM4 1560 aa9.45□□□□□ -0.9
COL6A6-201ENST00000358511 PRDM1O75626 825 aa9.45□□□□□ -0.9
COL6A6-201ENST00000358511 BPIFB4P59827 614 aa9.45□□□□□ -0.9
COL6A6-201ENST00000358511 NOP14P78316 857 aaKnown RBP9.45□□□□□ -0.9
COL6A6-201ENST00000358511 TRIM50Q86XT4 487 aa9.45□□□□□ -0.9
COL6A6-201ENST00000358511 SETDB2Q96T68 719 aa9.45□□□□□ -0.9
COL6A6-201ENST00000358511 ARPP21Q9UBL0 812 aaPredicted RBP9.45□□□□□ -0.9
COL6A6-201ENST00000358511 STK17AQ9UEE5 414 aa9.45□□□□□ -0.9
COL6A6-201ENST00000358511 SRPRBQ9Y5M8 271 aaKnown RBP9.45□□□□□ -0.9
COL6A6-201ENST00000358511 TOM1L1O75674 476 aa9.45□□□□□ -0.9
COL6A6-201ENST00000358511 NCF2P19878 526 aaPredicted RBP9.45□□□□□ -0.9
COL6A6-201ENST00000358511 ENAHQ8N8S7 591 aaPredicted RBP9.45□□□□□ -0.9
COL6A6-201ENST00000358511 HOOK2Q96ED9 719 aa9.45□□□□□ -0.9
COL6A6-201ENST00000358511 TTLL3Q9Y4R7 772 aa9.45□□□□□ -0.9
COL6A6-201ENST00000358511 SLC4A7Q9Y6M7 1214 aa9.45□□□□□ -0.9
COL6A6-201ENST00000358511 GNGT2O14610 69 aa9.45□□□□□ -0.9
COL6A6-201ENST00000358511 HDAC4P56524 1084 aa9.45□□□□□ -0.9
COL6A6-201ENST00000358511 GRAMD1CQ8IYS0 662 aa9.45□□□□□ -0.9
COL6A6-201ENST00000358511 EYA1Q99502 592 aa9.45□□□□□ -0.9
COL6A6-201ENST00000358511 POLR3CQ9BUI4 534 aaPredicted RBP9.45□□□□□ -0.9
COL6A6-201ENST00000358511 CARD10Q9BWT7 1032 aa9.45□□□□□ -0.9
COL6A6-201ENST00000358511 SMYD3Q9H7B4 428 aa9.45□□□□□ -0.9
COL6A6-201ENST00000358511 LRRIQ1Q96JM4 1722 aa9.45□□□□□ -0.9
COL6A6-201ENST00000358511 HNRNPH1P31943 449 aaKnown RBP9.45□□□□□ -0.9
COL6A6-201ENST00000358511 VSNL1P62760 191 aa9.45□□□□□ -0.9
COL6A6-201ENST00000358511 PPM1KQ8N3J5 372 aa9.45□□□□□ -0.9
COL6A6-201ENST00000358511 ZNF473Q8WTR7 871 aaKnown RBP9.45□□□□□ -0.9
COL6A6-201ENST00000358511 LPIN2Q92539 896 aa9.45□□□□□ -0.9
COL6A6-201ENST00000358511 FAM96AQ9H5X1 160 aa9.45□□□□□ -0.9
COL6A6-201ENST00000358511 DENND4BO75064 1496 aaPredicted RBP9.45□□□□□ -0.9
COL6A6-201ENST00000358511 LGALS16A8MUM7 142 aa9.44□□□□□ -0.9
COL6A6-201ENST00000358511 NVLO15381 856 aaKnown RBP9.44□□□□□ -0.9
COL6A6-201ENST00000358511 GPC4O75487 556 aa9.44□□□□□ -0.9
COL6A6-201ENST00000358511 MAPK4P31152 587 aa9.44□□□□□ -0.9
COL6A6-201ENST00000358511 ZNF790Q6PG37 636 aa9.44□□□□□ -0.9
COL6A6-201ENST00000358511 NOP9Q86U38 636 aaKnown RBP9.44□□□□□ -0.9
COL6A6-201ENST00000358511 GNL3Q9BVP2 549 aaKnown RBP eCLIP9.44□□□□□ -0.9
COL6A6-201ENST00000358511 ING2Q9H160 280 aa9.44□□□□□ -0.9
COL6A6-201ENST00000358511 COBLO75128 1261 aa9.44□□□□□ -0.9
COL6A6-201ENST00000358511 CYLC2Q14093 348 aaPredicted RBP9.44□□□□□ -0.9
COL6A6-201ENST00000358511 AATFQ9NY61 560 aaKnown RBP eCLIP9.44□□□□□ -0.9
COL6A6-201ENST00000358511 PPARGC1AQ9UBK2 798 aaKnown RBP9.44□□□□□ -0.9
COL6A6-201ENST00000358511 CD19P15391 556 aa9.44□□□□□ -0.9
COL6A6-201ENST00000358511 GABPAQ06546 454 aa9.44□□□□□ -0.9
COL6A6-201ENST00000358511 FSCBQ5H9T9 825 aa9.44□□□□□ -0.9
COL6A6-201ENST00000358511 TRMT10CQ7L0Y3 403 aaKnown RBP9.44□□□□□ -0.9
COL6A6-201ENST00000358511 UNC5CLQ8IV45 518 aa9.44□□□□□ -0.9
COL6A6-201ENST00000358511 KIAA2013Q8IYS2 634 aa9.44□□□□□ -0.9
COL6A6-201ENST00000358511 PSPC1Q8WXF1 523 aaKnown RBP9.44□□□□□ -0.9
COL6A6-201ENST00000358511 RNF34Q969K3 372 aa9.44□□□□□ -0.9
COL6A6-201ENST00000358511 SH2D4AQ9H788 454 aa9.44□□□□□ -0.9
COL6A6-201ENST00000358511 NEURL1BA8MQ27 555 aa9.44□□□□□ -0.9
COL6A6-201ENST00000358511 SLC17A8Q8NDX2 589 aa9.44□□□□□ -0.9
COL6A6-201ENST00000358511 NIP7Q9Y221 180 aaKnown RBP eCLIP9.44□□□□□ -0.9
COL6A6-201ENST00000358511 POLR2BP30876 1174 aaKnown RBP9.44□□□□□ -0.9
COL6A6-201ENST00000358511 DMP1Q13316 513 aaPredicted RBP9.44□□□□□ -0.9
COL6A6-201ENST00000358511 APOA5Q6Q788 366 aa9.44□□□□□ -0.9
COL6A6-201ENST00000358511 RGS9BPQ6ZS82 235 aa9.44□□□□□ -0.9
COL6A6-201ENST00000358511 FAM47EQ6ZV65 393 aa9.44□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms