RNA–Protein interactions for RNA: ENST00000358170.6

CD46-205, Transcript of CD46 molecule, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CD46, Length 3,371 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-205ENST00000358170 TUBB2AQ13885 445 aa9.13□□□□□ -0.95
CD46-205ENST00000358170 CDC37Q16543 378 aaPredicted RBP9.13□□□□□ -0.95
CD46-205ENST00000358170 FAM83BQ5T0W9 1011 aa9.13□□□□□ -0.95
CD46-205ENST00000358170 SFMBT2Q5VUG0 894 aa9.13□□□□□ -0.95
CD46-205ENST00000358170 KCTD16Q68DU8 428 aa9.13□□□□□ -0.95
CD46-205ENST00000358170 CCDC65Q8IXS2 484 aa9.13□□□□□ -0.95
CD46-205ENST00000358170 GUF1Q8N442 669 aaKnown RBP9.13□□□□□ -0.95
CD46-205ENST00000358170 RETREG2Q8NC44 543 aa9.13□□□□□ -0.95
CD46-205ENST00000358170 GJD4Q96KN9 370 aaPredicted RBP9.13□□□□□ -0.95
CD46-205ENST00000358170 ERGIC2Q96RQ1 377 aa9.13□□□□□ -0.95
CD46-205ENST00000358170 TUBB2BQ9BVA1 445 aa9.13□□□□□ -0.95
CD46-205ENST00000358170 SELENOOQ9BVL4 669 aa9.13□□□□□ -0.95
CD46-205ENST00000358170 RGL1Q9NZL6 768 aa9.13□□□□□ -0.95
CD46-205ENST00000358170 STK17AQ9UEE5 414 aa9.13□□□□□ -0.95
CD46-205ENST00000358170 COL16A1Q07092 1604 aaPredicted RBP9.13□□□□□ -0.95
CD46-205ENST00000358170 NHSL1Q5SYE7 1610 aa9.12□□□□□ -0.95
CD46-205ENST00000358170 RSPH10B2B2RC85 870 aa9.12□□□□□ -0.95
CD46-205ENST00000358170 TRIM66O15016 1216 aa9.12□□□□□ -0.95
CD46-205ENST00000358170 MED24O75448 989 aa9.12□□□□□ -0.95
CD46-205ENST00000358170 CFBP00751 764 aa9.12□□□□□ -0.95
CD46-205ENST00000358170 RSPH10BP0C881 870 aa9.12□□□□□ -0.95
CD46-205ENST00000358170 FECHP22830 423 aa9.12□□□□□ -0.95
CD46-205ENST00000358170 CASP5P51878 434 aa9.12□□□□□ -0.95
CD46-205ENST00000358170 MEA1Q16626 185 aa9.12□□□□□ -0.95
CD46-205ENST00000358170 TRIM58Q8NG06 486 aa9.12□□□□□ -0.95
CD46-205ENST00000358170 ANO3Q9BYT9 981 aa9.12□□□□□ -0.95
CD46-205ENST00000358170 TDRD3Q9H7E2 651 aaKnown RBP9.12□□□□□ -0.95
CD46-205ENST00000358170 SIK3Q9Y2K2 1263 aa9.12□□□□□ -0.95
CD46-205ENST00000358170 SPDYE3A6NKU9 549 aa9.12□□□□□ -0.95
CD46-205ENST00000358170 DDX39AO00148 427 aaKnown RBP9.12□□□□□ -0.95
CD46-205ENST00000358170 ZBTB39O15060 712 aa9.12□□□□□ -0.95
CD46-205ENST00000358170 SLC9A1P19634 815 aa9.12□□□□□ -0.95
CD46-205ENST00000358170 KCNMA1Q12791 1236 aa9.12□□□□□ -0.95
CD46-205ENST00000358170 MAP9Q49MG5 647 aa9.12□□□□□ -0.95
CD46-205ENST00000358170 SLC9C1Q4G0N8 1177 aa9.12□□□□□ -0.95
CD46-205ENST00000358170 CCDC174Q6PII3 467 aa9.12□□□□□ -0.95
CD46-205ENST00000358170 OSBPL9Q96SU4 736 aa9.12□□□□□ -0.95
CD46-205ENST00000358170 SH2D3AQ9BRG2 576 aa9.12□□□□□ -0.95
CD46-205ENST00000358170 BHMT2Q9H2M3 363 aa9.12□□□□□ -0.95
CD46-205ENST00000358170 MAGEF1Q9HAY2 307 aa9.12□□□□□ -0.95
CD46-205ENST00000358170 RIC8AQ9NPQ8 531 aa9.12□□□□□ -0.95
CD46-205ENST00000358170 FRMD4AQ9P2Q2 1039 aaPredicted RBP9.12□□□□□ -0.95
CD46-205ENST00000358170 LCMT1Q9UIC8 334 aa9.12□□□□□ -0.95
CD46-205ENST00000358170 PLCH1Q4KWH8 1693 aa9.12□□□□□ -0.95
CD46-205ENST00000358170 PVALEFA0A1B0GWK0 134 aa9.12□□□□□ -0.95
CD46-205ENST00000358170 PALMO75781 387 aa9.12□□□□□ -0.95
CD46-205ENST00000358170 CRKP46108 304 aa9.12□□□□□ -0.95
CD46-205ENST00000358170 ICA1Q05084 483 aa9.12□□□□□ -0.95
CD46-205ENST00000358170 KCNA1Q09470 495 aa9.12□□□□□ -0.95
CD46-205ENST00000358170 CTTNQ14247 550 aaKnown RBP9.12□□□□□ -0.95
CD46-205ENST00000358170 TAF3Q5VWG9 929 aa9.12□□□□□ -0.95
CD46-205ENST00000358170 PAPD7Q5XG87 772 aaKnown RBP9.12□□□□□ -0.95
CD46-205ENST00000358170 GJB7Q6PEY0 223 aa9.12□□□□□ -0.95
CD46-205ENST00000358170 LRRC55Q6ZSA7 311 aa9.12□□□□□ -0.95
CD46-205ENST00000358170 TPH2Q8IWU9 490 aa9.12□□□□□ -0.95
CD46-205ENST00000358170 SPATA4Q8NEY3 305 aa9.12□□□□□ -0.95
CD46-205ENST00000358170 NOX5Q96PH1 765 aa9.12□□□□□ -0.95
CD46-205ENST00000358170 RUFY1Q96T51 708 aa9.12□□□□□ -0.95
CD46-205ENST00000358170 SH2D4AQ9H788 454 aa9.12□□□□□ -0.95
CD46-205ENST00000358170 SNX12Q9UMY4 172 aa9.12□□□□□ -0.95
CD46-205ENST00000358170 JRKLQ9Y4A0 524 aa9.12□□□□□ -0.95
CD46-205ENST00000358170 HYOU1Q9Y4L1 999 aa9.12□□□□□ -0.95
CD46-205ENST00000358170 A0A1B0GUL6 1792 aa9.11□□□□□ -0.95
CD46-205ENST00000358170 CLRN2A0PK11 232 aa9.11□□□□□ -0.95
CD46-205ENST00000358170 GOLGA6BA6NDN3 693 aa9.11□□□□□ -0.95
CD46-205ENST00000358170 GCNT3O95395 438 aa9.11□□□□□ -0.95
CD46-205ENST00000358170 FXR2P51116 673 aaKnown RBP eCLIP9.11□□□□□ -0.95
CD46-205ENST00000358170 HLTFQ14527 1009 aaKnown RBP eCLIP9.11□□□□□ -0.952e-6■■□□□ 13.6
CD46-205ENST00000358170 ADAT2Q7Z6V5 191 aaKnown RBP9.11□□□□□ -0.95
CD46-205ENST00000358170 SFR1Q86XK3 245 aa9.11□□□□□ -0.95
CD46-205ENST00000358170 HNRNPLLQ8WVV9 542 aaKnown RBP9.11□□□□□ -0.95
CD46-205ENST00000358170 EHD4Q9H223 541 aa9.11□□□□□ -0.95
CD46-205ENST00000358170 RBM12Q9NTZ6 932 aaKnown RBP9.11□□□□□ -0.95
CD46-205ENST00000358170 PHLPP1O60346 1717 aa9.11□□□□□ -0.95
CD46-205ENST00000358170 ARAP2Q8WZ64 1704 aa9.11□□□□□ -0.95
CD46-205ENST00000358170 A0A087X0T9 212 aa9.11□□□□□ -0.95
CD46-205ENST00000358170 F5H6K3 240 aa9.11□□□□□ -0.95
CD46-205ENST00000358170 CETN3O15182 167 aa9.11□□□□□ -0.95
CD46-205ENST00000358170 GH2P01242 217 aa9.11□□□□□ -0.95
CD46-205ENST00000358170 FAM228BP0C875 321 aa9.11□□□□□ -0.95
CD46-205ENST00000358170 KLRC1P26715 233 aa9.11□□□□□ -0.95
CD46-205ENST00000358170 KLRC3Q07444 240 aa9.11□□□□□ -0.95
CD46-205ENST00000358170 KCNH2Q12809 1159 aa9.11□□□□□ -0.95
CD46-205ENST00000358170 C8orf74Q6P047 294 aa9.11□□□□□ -0.95
CD46-205ENST00000358170 CREG2Q8IUH2 290 aa9.11□□□□□ -0.95
CD46-205ENST00000358170 DNAJC19Q96DA6 116 aa9.11□□□□□ -0.95
CD46-205ENST00000358170 ZBTB21Q9ULJ3 1066 aa9.11□□□□□ -0.95
CD46-205ENST00000358170 VGLL3A8MV65 326 aa9.1□□□□□ -0.95
CD46-205ENST00000358170 TCP10L2B9ZVM9 353 aa9.1□□□□□ -0.95
CD46-205ENST00000358170 MMP10P09238 476 aa9.1□□□□□ -0.95
CD46-205ENST00000358170 MYBP10242 640 aa9.1□□□□□ -0.95
CD46-205ENST00000358170 ATP1A2P50993 1020 aa9.1□□□□□ -0.95
CD46-205ENST00000358170 ARHGAP4P98171 946 aa9.1□□□□□ -0.95
CD46-205ENST00000358170 GUCY2DQ02846 1103 aa9.1□□□□□ -0.95
CD46-205ENST00000358170 LRRC63Q05C16 580 aa9.1□□□□□ -0.95
CD46-205ENST00000358170 TRADDQ15628 312 aa9.1□□□□□ -0.95
CD46-205ENST00000358170 APOBEC3HQ6NTF7 200 aaKnown RBP9.1□□□□□ -0.95
CD46-205ENST00000358170 PDXDC1Q6P996 788 aa9.1□□□□□ -0.95
CD46-205ENST00000358170 CCNI2Q6ZMN8 369 aaPredicted RBP9.1□□□□□ -0.95
CD46-205ENST00000358170 CATSPER3Q86XQ3 398 aa9.1□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms