RNA–Protein interactions for RNA: ENST00000357250.10

COL9A1-202, Transcript of collagen type IX alpha 1 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL9A1, Length 4,761 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A1-202ENST00000357250 CCDC197Q8NCU1 140 aa12.75□□□□□ -0.37
COL9A1-202ENST00000357250 PAGE5Q96GU1 130 aa12.75□□□□□ -0.37
COL9A1-202ENST00000357250 NRBP1Q9UHY1 535 aa12.75□□□□□ -0.37
COL9A1-202ENST00000357250 ASPHQ12797 758 aa12.75□□□□□ -0.37
COL9A1-202ENST00000357250 PROM2Q8N271 834 aa12.75□□□□□ -0.37
COL9A1-202ENST00000357250 RASGRP4Q8TDF6 673 aa12.75□□□□□ -0.37
COL9A1-202ENST00000357250 DYNLL2Q96FJ2 89 aa12.75□□□□□ -0.37
COL9A1-202ENST00000357250 TUBB6Q9BUF5 446 aa12.75□□□□□ -0.37
COL9A1-202ENST00000357250 PARVGQ9HBI0 331 aa12.75□□□□□ -0.37
COL9A1-202ENST00000357250 CDHR2Q9BYE9 1310 aa12.75□□□□□ -0.37
COL9A1-202ENST00000357250 ARHGEF37A1IGU5 675 aa12.75□□□□□ -0.37
COL9A1-202ENST00000357250 A6NJR5 290 aa12.75□□□□□ -0.37
COL9A1-202ENST00000357250 TCP10L2B9ZVM9 353 aa12.75□□□□□ -0.37
COL9A1-202ENST00000357250 LUC7L3O95232 432 aaKnown RBP12.75□□□□□ -0.37
COL9A1-202ENST00000357250 USP17L8P0C7I0 530 aa12.75□□□□□ -0.37
COL9A1-202ENST00000357250 MIS18BP1Q6P0N0 1132 aa12.75□□□□□ -0.37
COL9A1-202ENST00000357250 SCYL2Q6P3W7 929 aa12.75□□□□□ -0.37
COL9A1-202ENST00000357250 EMBQ6PCB8 327 aa12.75□□□□□ -0.37
COL9A1-202ENST00000357250 MGARPQ8TDB4 240 aa12.75□□□□□ -0.37
COL9A1-202ENST00000357250 ANKRD36BP1Q96IX9 119 aa12.75□□□□□ -0.37
COL9A1-202ENST00000357250 TLR3O15455 904 aaKnown RBP12.74□□□□□ -0.37
COL9A1-202ENST00000357250 MED7O43513 233 aa12.74□□□□□ -0.37
COL9A1-202ENST00000357250 PTPN21Q16825 1174 aa12.74□□□□□ -0.37
COL9A1-202ENST00000357250 PPP1R18Q6NYC8 613 aa12.74□□□□□ -0.37
COL9A1-202ENST00000357250 ARHGEF18Q6ZSZ5 1173 aa12.74□□□□□ -0.37
COL9A1-202ENST00000357250 ZNF653Q96CK0 615 aa12.74□□□□□ -0.37
COL9A1-202ENST00000357250 NDST4Q9H3R1 872 aa12.74□□□□□ -0.37
COL9A1-202ENST00000357250 DISC1Q9NRI5 854 aa12.74□□□□□ -0.37
COL9A1-202ENST00000357250 FRMPD1Q5SYB0 1578 aa12.74□□□□□ -0.37
COL9A1-202ENST00000357250 ECEL1O95672 775 aa12.74□□□□□ -0.37
COL9A1-202ENST00000357250 MAPK4P31152 587 aa12.74□□□□□ -0.37
COL9A1-202ENST00000357250 NR5A1Q13285 461 aa12.74□□□□□ -0.37
COL9A1-202ENST00000357250 PPP2R5DQ14738 602 aa12.74□□□□□ -0.37
COL9A1-202ENST00000357250 PIGSQ96S52 555 aa12.74□□□□□ -0.37
COL9A1-202ENST00000357250 MMS19Q96T76 1030 aa12.74□□□□□ -0.37
COL9A1-202ENST00000357250 NCAPGQ9BPX3 1015 aa12.74□□□□□ -0.37
COL9A1-202ENST00000357250 PLEKHG2Q9H7P9 1386 aa12.74□□□□□ -0.37
COL9A1-202ENST00000357250 INHBAP08476 426 aa12.74□□□□□ -0.37
COL9A1-202ENST00000357250 PRDX5P30044 214 aa12.74□□□□□ -0.37
COL9A1-202ENST00000357250 CUL1Q13616 776 aa12.74□□□□□ -0.37
COL9A1-202ENST00000357250 KCTD2Q14681 263 aa12.74□□□□□ -0.37
COL9A1-202ENST00000357250 MESDQ14696 234 aa12.74□□□□□ -0.37
COL9A1-202ENST00000357250 SYDE2Q5VT97 1194 aa12.74□□□□□ -0.37
COL9A1-202ENST00000357250 RHOT2Q8IXI1 618 aa12.74□□□□□ -0.37
COL9A1-202ENST00000357250 PROCA1Q8NCQ7 364 aaPredicted RBP12.74□□□□□ -0.37
COL9A1-202ENST00000357250 COA1Q9GZY4 146 aa12.74□□□□□ -0.37
COL9A1-202ENST00000357250 KMT5AQ9NQR1 393 aa12.74□□□□□ -0.37
COL9A1-202ENST00000357250 FRMD4AQ9P2Q2 1039 aaPredicted RBP12.74□□□□□ -0.37
COL9A1-202ENST00000357250 NRXN1Q9ULB1 1477 aa12.74□□□□□ -0.37
COL9A1-202ENST00000357250 COBLO75128 1261 aa12.74□□□□□ -0.37
COL9A1-202ENST00000357250 ATP1A2P50993 1020 aa12.74□□□□□ -0.37
COL9A1-202ENST00000357250 STAT2P52630 851 aa12.74□□□□□ -0.37
COL9A1-202ENST00000357250 GRAPQ13588 217 aa12.74□□□□□ -0.37
COL9A1-202ENST00000357250 PRPSAP1Q14558 356 aa12.74□□□□□ -0.37
COL9A1-202ENST00000357250 TMTC3Q6ZXV5 915 aa12.74□□□□□ -0.37
COL9A1-202ENST00000357250 GRAPLQ8TC17 118 aaPredicted RBP12.74□□□□□ -0.37
COL9A1-202ENST00000357250 MED10Q9BTT4 135 aa12.74□□□□□ -0.37
COL9A1-202ENST00000357250 MROH2AA6NES4 1674 aa12.74□□□□□ -0.37
COL9A1-202ENST00000357250 ANO9A1A5B4 782 aa12.73□□□□□ -0.37
COL9A1-202ENST00000357250 FOXO4P98177 505 aa12.73□□□□□ -0.37
COL9A1-202ENST00000357250 DPY19L2Q6NUT2 758 aa12.73□□□□□ -0.37
COL9A1-202ENST00000357250 ANKRD13CQ8N6S4 541 aa12.73□□□□□ -0.37
COL9A1-202ENST00000357250 KIF2CQ99661 725 aa12.73□□□□□ -0.37
COL9A1-202ENST00000357250 ZNF233A6NK53 670 aa12.73□□□□□ -0.37
COL9A1-202ENST00000357250 PLA2G4BP0C869 781 aa12.73□□□□□ -0.37
COL9A1-202ENST00000357250 SRGAP2BP0DMP2 458 aa12.73□□□□□ -0.37
COL9A1-202ENST00000357250 CUL4BQ13620 913 aa12.73□□□□□ -0.37
COL9A1-202ENST00000357250 SUPT20HL1Q3ZLR7 823 aa12.73□□□□□ -0.37
COL9A1-202ENST00000357250 TCP11X2Q5H9J9 407 aa12.73□□□□□ -0.37
COL9A1-202ENST00000357250 TBC1D9BQ66K14 1250 aa12.73□□□□□ -0.37
COL9A1-202ENST00000357250 KRT27Q7Z3Y8 459 aa12.73□□□□□ -0.37
COL9A1-202ENST00000357250 RABEP2Q9H5N1 569 aa12.73□□□□□ -0.37
COL9A1-202ENST00000357250 NHEJ1Q9H9Q4 299 aaPredicted RBP12.73□□□□□ -0.37
COL9A1-202ENST00000357250 SUGCTQ9HAC7 445 aa12.73□□□□□ -0.37
COL9A1-202ENST00000357250 PCDHB4Q9Y5E5 795 aa12.73□□□□□ -0.37
COL9A1-202ENST00000357250 IQGAP1P46940 1657 aa12.73□□□□□ -0.37
COL9A1-202ENST00000357250 LAMC1P11047 1609 aa12.73□□□□□ -0.37
COL9A1-202ENST00000357250 PVALEFA0A1B0GWK0 134 aa12.73□□□□□ -0.37
COL9A1-202ENST00000357250 MFAP3LO75121 409 aa12.73□□□□□ -0.37
COL9A1-202ENST00000357250 PLCG1P19174 1290 aa12.73□□□□□ -0.37
COL9A1-202ENST00000357250 MXI1P50539 228 aa12.73□□□□□ -0.37
COL9A1-202ENST00000357250 MUM1Q2TAK8 710 aa12.73□□□□□ -0.37
COL9A1-202ENST00000357250 SULF1Q8IWU6 871 aa12.73□□□□□ -0.37
COL9A1-202ENST00000357250 BBS5Q8N3I7 341 aa12.73□□□□□ -0.37
COL9A1-202ENST00000357250 EPB41L5Q9HCM4 733 aa12.73□□□□□ -0.37
COL9A1-202ENST00000357250 H7C0C1 242 aa12.73□□□□□ -0.37
COL9A1-202ENST00000357250 SART1O43290 800 aaKnown RBP12.73□□□□□ -0.37
COL9A1-202ENST00000357250 ATP5OP48047 213 aa12.73□□□□□ -0.37
COL9A1-202ENST00000357250 UNC13DQ70J99 1090 aa12.73□□□□□ -0.37
COL9A1-202ENST00000357250 EFCAB13Q8IY85 973 aa12.73□□□□□ -0.37
COL9A1-202ENST00000357250 PAGR1Q9BTK6 254 aa12.73□□□□□ -0.37
COL9A1-202ENST00000357250 CCDC68Q9H2F9 335 aa12.73□□□□□ -0.37
COL9A1-202ENST00000357250 LPXNO60711 386 aa12.72□□□□□ -0.37
COL9A1-202ENST00000357250 MAP2K2P36507 400 aa12.72□□□□□ -0.37
COL9A1-202ENST00000357250 SGO2Q562F6 1265 aa12.72□□□□□ -0.37
COL9A1-202ENST00000357250 MB21D1Q8N884 522 aa12.72□□□□□ -0.37
COL9A1-202ENST00000357250 DCAF4Q8WV16 495 aa12.72□□□□□ -0.37
COL9A1-202ENST00000357250 PCDHB6Q9Y5E3 794 aa12.72□□□□□ -0.37
COL9A1-202ENST00000357250 ZC3H13Q5T200 1668 aaKnown RBP12.72□□□□□ -0.37
COL9A1-202ENST00000357250 CDC25AP30304 524 aa12.72□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms