RNA–Protein interactions for RNA: ENST00000357235.5

CDC42SE1-201, Transcript of CDC42 small effector 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC42SE1, Length 3,045 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1-201ENST00000357235 EPS15P42566 896 aa9.05□□□□□ -0.96
CDC42SE1-201ENST00000357235 CACNB1Q02641 598 aaPredicted RBP9.05□□□□□ -0.96
CDC42SE1-201ENST00000357235 SF3B2Q13435 895 aaKnown RBP9.05□□□□□ -0.96
CDC42SE1-201ENST00000357235 RAPGEF1Q13905 1077 aa9.05□□□□□ -0.96
CDC42SE1-201ENST00000357235 NONOQ15233 471 aaKnown RBP eCLIP9.05□□□□□ -0.96
CDC42SE1-201ENST00000357235 DIXDC1Q155Q3 683 aa9.05□□□□□ -0.96
CDC42SE1-201ENST00000357235 ODF2Q5BJF6 829 aa9.05□□□□□ -0.96
CDC42SE1-201ENST00000357235 MAB21L3Q8N8X9 362 aa9.05□□□□□ -0.96
CDC42SE1-201ENST00000357235 MAGEC3Q8TD91 643 aa9.05□□□□□ -0.96
CDC42SE1-201ENST00000357235 TBCKQ8TEA7 893 aa9.05□□□□□ -0.96
CDC42SE1-201ENST00000357235 UBA5Q9GZZ9 404 aa9.05□□□□□ -0.96
CDC42SE1-201ENST00000357235 TMX4Q9H1E5 349 aaPredicted RBP9.05□□□□□ -0.96
CDC42SE1-201ENST00000357235 HOMER3Q9NSC5 361 aa9.05□□□□□ -0.96
CDC42SE1-201ENST00000357235 DDX52Q9Y2R4 599 aaKnown RBP eCLIP9.05□□□□□ -0.96
CDC42SE1-201ENST00000357235 MYH10P35580 1976 aa9.05□□□□□ -0.96
CDC42SE1-201ENST00000357235 COL18A1P39060 1754 aa9.05□□□□□ -0.96
CDC42SE1-201ENST00000357235 BACH1O14867 736 aa9.05□□□□□ -0.96
CDC42SE1-201ENST00000357235 COQ9O75208 318 aa9.05□□□□□ -0.96
CDC42SE1-201ENST00000357235 POLR2FP61218 127 aaKnown RBP9.05□□□□□ -0.96
CDC42SE1-201ENST00000357235 ARMC3Q5W041 872 aa9.05□□□□□ -0.96
CDC42SE1-201ENST00000357235 EMBQ6PCB8 327 aa9.05□□□□□ -0.96
CDC42SE1-201ENST00000357235 IFT20Q8IY31 132 aa9.05□□□□□ -0.96
CDC42SE1-201ENST00000357235 TGFBRAP1Q8WUH2 860 aa9.05□□□□□ -0.96
CDC42SE1-201ENST00000357235 RNPC3Q96LT9 517 aaKnown RBP9.05□□□□□ -0.96
CDC42SE1-201ENST00000357235 ERGIC2Q96RQ1 377 aa9.05□□□□□ -0.96
CDC42SE1-201ENST00000357235 TLR10Q9BXR5 811 aa9.05□□□□□ -0.96
CDC42SE1-201ENST00000357235 TMEM260Q9NX78 707 aa9.05□□□□□ -0.96
CDC42SE1-201ENST00000357235 ARPP21Q9UBL0 812 aaPredicted RBP9.05□□□□□ -0.96
CDC42SE1-201ENST00000357235 ADAMTS1Q9UHI8 967 aa9.05□□□□□ -0.96
CDC42SE1-201ENST00000357235 E7EVH7 732 aa9.05□□□□□ -0.96
CDC42SE1-201ENST00000357235 ORC4O43929 436 aa9.05□□□□□ -0.96
CDC42SE1-201ENST00000357235 RAD21O60216 631 aa9.05□□□□□ -0.96
CDC42SE1-201ENST00000357235 NTSR2O95665 410 aa9.05□□□□□ -0.96
CDC42SE1-201ENST00000357235 HIBADHP31937 336 aaKnown RBP9.05□□□□□ -0.96
CDC42SE1-201ENST00000357235 PDE6BP35913 854 aa9.05□□□□□ -0.96
CDC42SE1-201ENST00000357235 SLC5A9Q2M3M2 681 aa9.05□□□□□ -0.96
CDC42SE1-201ENST00000357235 PARP10Q53GL7 1025 aa9.05□□□□□ -0.96
CDC42SE1-201ENST00000357235 CDCA2Q69YH5 1023 aaPredicted RBP9.05□□□□□ -0.96
CDC42SE1-201ENST00000357235 CCDC84Q86UT8 332 aaPredicted RBP9.05□□□□□ -0.96
CDC42SE1-201ENST00000357235 TRIM74Q86UV6 250 aa9.05□□□□□ -0.96
CDC42SE1-201ENST00000357235 TRIM73Q86UV7 250 aa9.05□□□□□ -0.96
CDC42SE1-201ENST00000357235 MAPKAPK5Q8IW41 473 aa9.05□□□□□ -0.96
CDC42SE1-201ENST00000357235 PURBQ96QR8 312 aaKnown RBP9.05□□□□□ -0.96
CDC42SE1-201ENST00000357235 SEC63Q9UGP8 760 aaKnown RBP9.05□□□□□ -0.96
CDC42SE1-201ENST00000357235 MAD2L2Q9UI95 211 aa9.05□□□□□ -0.96
CDC42SE1-201ENST00000357235 CHD4Q14839 1912 aa9.05□□□□□ -0.96
CDC42SE1-201ENST00000357235 MYMKA6NI61 221 aa9.04□□□□□ -0.96
CDC42SE1-201ENST00000357235 GOLGA6L10A6NI86 522 aa9.04□□□□□ -0.96
CDC42SE1-201ENST00000357235 STXBP3O00186 592 aa9.04□□□□□ -0.96
CDC42SE1-201ENST00000357235 ADAMTS2O95450 1211 aa9.04□□□□□ -0.96
CDC42SE1-201ENST00000357235 EIF6P56537 245 aaKnown RBP9.04□□□□□ -0.96
CDC42SE1-201ENST00000357235 UBE4AQ14139 1066 aa9.04□□□□□ -0.96
CDC42SE1-201ENST00000357235 MAN2A1Q16706 1144 aa9.04□□□□□ -0.96
CDC42SE1-201ENST00000357235 KIAA0753Q2KHM9 967 aa9.04□□□□□ -0.96
CDC42SE1-201ENST00000357235 CAPRIN2Q6IMN6 1127 aaKnown RBP9.04□□□□□ -0.96
CDC42SE1-201ENST00000357235 CYB5D1Q6P9G0 228 aa9.04□□□□□ -0.96
CDC42SE1-201ENST00000357235 NEK8Q86SG6 692 aa9.04□□□□□ -0.96
CDC42SE1-201ENST00000357235 DRAXINQ8NBI3 349 aaPredicted RBP9.04□□□□□ -0.96
CDC42SE1-201ENST00000357235 OR2W6PQ8NHA6 318 aa9.04□□□□□ -0.96
CDC42SE1-201ENST00000357235 TBC1D5Q92609 795 aa9.04□□□□□ -0.96
CDC42SE1-201ENST00000357235 ATP8A2Q9NTI2 1148 aa9.04□□□□□ -0.96
CDC42SE1-201ENST00000357235 BARHL2Q9NY43 387 aa9.04□□□□□ -0.96
CDC42SE1-201ENST00000357235 COL1A1P02452 1464 aaPredicted RBP9.04□□□□□ -0.96
CDC42SE1-201ENST00000357235 CAMTA2O94983 1202 aa9.04□□□□□ -0.96
CDC42SE1-201ENST00000357235 MYL1P05976 194 aa9.04□□□□□ -0.96
CDC42SE1-201ENST00000357235 PCP11498 1178 aaKnown RBP9.04□□□□□ -0.96
CDC42SE1-201ENST00000357235 NR1D1P20393 614 aa9.04□□□□□ -0.96
CDC42SE1-201ENST00000357235 IFT88Q13099 833 aa9.04□□□□□ -0.96
CDC42SE1-201ENST00000357235 SLC35G1Q2M3R5 365 aa9.04□□□□□ -0.96
CDC42SE1-201ENST00000357235 TBC1D25Q3MII6 688 aa9.04□□□□□ -0.96
CDC42SE1-201ENST00000357235 SLC9C1Q4G0N8 1177 aa9.04□□□□□ -0.96
CDC42SE1-201ENST00000357235 KLHDC7AQ5VTJ3 777 aa9.04□□□□□ -0.96
CDC42SE1-201ENST00000357235 INTS5Q6P9B9 1019 aaKnown RBP9.04□□□□□ -0.96
CDC42SE1-201ENST00000357235 TXNRD3Q86VQ6 643 aa9.04□□□□□ -0.96
CDC42SE1-201ENST00000357235 C3orf20Q8ND61 904 aa9.04□□□□□ -0.96
CDC42SE1-201ENST00000357235 SNX29Q8TEQ0 813 aa9.04□□□□□ -0.96
CDC42SE1-201ENST00000357235 SH3GL2Q99962 352 aa9.04□□□□□ -0.96
CDC42SE1-201ENST00000357235 TMEM47Q9BQJ4 181 aa9.04□□□□□ -0.96
CDC42SE1-201ENST00000357235 WDR3Q9UNX4 943 aaKnown RBP eCLIP9.04□□□□□ -0.96
CDC42SE1-201ENST00000357235 BCL9LQ86UU0 1499 aa9.04□□□□□ -0.96
CDC42SE1-201ENST00000357235 GOLGB1Q14789 3259 aaKnown RBP9.03□□□□□ -0.96
CDC42SE1-201ENST00000357235 ZNF233A6NK53 670 aa9.03□□□□□ -0.96
CDC42SE1-201ENST00000357235 KCNK3O14649 394 aa9.03□□□□□ -0.96
CDC42SE1-201ENST00000357235 KLRC1P26715 233 aa9.03□□□□□ -0.96
CDC42SE1-201ENST00000357235 LSP1P33241 339 aa9.03□□□□□ -0.96
CDC42SE1-201ENST00000357235 GNAQP50148 359 aa9.03□□□□□ -0.96
CDC42SE1-201ENST00000357235 RAB27AP51159 221 aa9.03□□□□□ -0.96
CDC42SE1-201ENST00000357235 PAK2Q13177 524 aa9.03□□□□□ -0.96
CDC42SE1-201ENST00000357235 CALCRLQ16602 461 aa9.03□□□□□ -0.96
CDC42SE1-201ENST00000357235 ALS2CLQ60I27 953 aa9.03□□□□□ -0.96
CDC42SE1-201ENST00000357235 FAM133AQ8N9E0 248 aa9.03□□□□□ -0.96
CDC42SE1-201ENST00000357235 TCP11Q8WWU5 503 aa9.03□□□□□ -0.96
CDC42SE1-201ENST00000357235 LARP4BQ92615 738 aaKnown RBP9.03□□□□□ -0.96
CDC42SE1-201ENST00000357235 HOOK2Q96ED9 719 aa9.03□□□□□ -0.96
CDC42SE1-201ENST00000357235 TSG101Q99816 390 aa9.03□□□□□ -0.96
CDC42SE1-201ENST00000357235 LSM14BQ9BX40 385 aaKnown RBP9.03□□□□□ -0.96
CDC42SE1-201ENST00000357235 PACSIN1Q9BY11 444 aa9.03□□□□□ -0.96
CDC42SE1-201ENST00000357235 C6orf50Q9HD87 102 aa9.03□□□□□ -0.96
CDC42SE1-201ENST00000357235 SIK3Q9Y2K2 1263 aa9.03□□□□□ -0.96
CDC42SE1-201ENST00000357235 ZNF804BA4D1E1 1349 aa9.03□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms