RNA–Protein interactions for RNA: ENST00000355451.7

NUDCD3-202, Transcript of NudC domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NUDCD3, Length 8,256 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD3-202ENST00000355451 TSSK1BQ9BXA7 367 aa12.4□□□□□ -0.42
NUDCD3-202ENST00000355451 PARVGQ9HBI0 331 aa12.4□□□□□ -0.42
NUDCD3-202ENST00000355451 ARHGEF3Q9NR81 526 aa12.4□□□□□ -0.42
NUDCD3-202ENST00000355451 FAM207AQ9NSI2 230 aaPredicted RBP12.4□□□□□ -0.42
NUDCD3-202ENST00000355451 CCND2P30279 289 aa12.4□□□□□ -0.42
NUDCD3-202ENST00000355451 AOC3Q16853 763 aa12.4□□□□□ -0.42
NUDCD3-202ENST00000355451 OOSP2Q86WS3 158 aa12.4□□□□□ -0.42
NUDCD3-202ENST00000355451 SERPINI1Q99574 410 aa12.4□□□□□ -0.42
NUDCD3-202ENST00000355451 STN1Q9H668 368 aaKnown RBP12.4□□□□□ -0.42
NUDCD3-202ENST00000355451 RPF1Q9H9Y2 349 aaKnown RBP12.4□□□□□ -0.42
NUDCD3-202ENST00000355451 PCDHA12Q9UN75 941 aa12.4□□□□□ -0.42
NUDCD3-202ENST00000355451 KIAA0825Q8IV33 1275 aa12.4□□□□□ -0.42
NUDCD3-202ENST00000355451 C1orf131Q8NDD1 294 aaKnown RBP12.4□□□□□ -0.42
NUDCD3-202ENST00000355451 CUEDC2Q9H467 287 aa12.4□□□□□ -0.42
NUDCD3-202ENST00000355451 FBXO2Q9UK22 296 aaPredicted RBP12.4□□□□□ -0.42
NUDCD3-202ENST00000355451 PCDHGA4Q9Y5G9 962 aa12.4□□□□□ -0.42
NUDCD3-202ENST00000355451 ZSCAN23Q3MJ62 389 aa12.4□□□□□ -0.42
NUDCD3-202ENST00000355451 TBC1D9Q6ZT07 1266 aa12.4□□□□□ -0.42
NUDCD3-202ENST00000355451 NELFBQ8WX92 580 aa12.4□□□□□ -0.42
NUDCD3-202ENST00000355451 CENPTQ96BT3 561 aa12.4□□□□□ -0.42
NUDCD3-202ENST00000355451 PACSIN2Q9UNF0 486 aaPredicted RBP12.4□□□□□ -0.42
NUDCD3-202ENST00000355451 MYL5Q02045 173 aa12.4□□□□□ -0.43
NUDCD3-202ENST00000355451 KRT78Q8N1N4 520 aa12.4□□□□□ -0.43
NUDCD3-202ENST00000355451 CCDC90BQ9GZT6 254 aa12.4□□□□□ -0.43
NUDCD3-202ENST00000355451 NXF1Q9UBU9 619 aaKnown RBP12.4□□□□□ -0.43
NUDCD3-202ENST00000355451 FAM135AQ9P2D6 1515 aa12.4□□□□□ -0.43
NUDCD3-202ENST00000355451 PCDH11XQ9BZA7 1347 aa12.39□□□□□ -0.43
NUDCD3-202ENST00000355451 PCDH11YQ9BZA8 1340 aa12.39□□□□□ -0.43
NUDCD3-202ENST00000355451 CCDC78A2IDD5 438 aa12.39□□□□□ -0.43
NUDCD3-202ENST00000355451 HES6Q96HZ4 224 aa12.39□□□□□ -0.43
NUDCD3-202ENST00000355451 RPAP3Q9H6T3 665 aaPredicted RBP12.39□□□□□ -0.43
NUDCD3-202ENST00000355451 RUBCNLQ9H714 662 aa12.39□□□□□ -0.43
NUDCD3-202ENST00000355451 CAPN10Q9HC96 672 aa12.39□□□□□ -0.43
NUDCD3-202ENST00000355451 PALMDQ9NP74 551 aa12.39□□□□□ -0.43
NUDCD3-202ENST00000355451 ITGA6P23229 1130 aa12.39□□□□□ -0.43
NUDCD3-202ENST00000355451 C10orf53Q8N6V4 93 aa12.39□□□□□ -0.43
NUDCD3-202ENST00000355451 ACTR5Q9H9F9 607 aaPredicted RBP12.39□□□□□ -0.43
NUDCD3-202ENST00000355451 PANK4Q9NVE7 773 aa12.39□□□□□ -0.43
NUDCD3-202ENST00000355451 ARHGAP26Q9UNA1 814 aa12.39□□□□□ -0.43
NUDCD3-202ENST00000355451 TFCP2Q12800 502 aa12.39□□□□□ -0.43
NUDCD3-202ENST00000355451 NANOGNBQ7Z5D8 188 aa12.39□□□□□ -0.43
NUDCD3-202ENST00000355451 CCDC84Q86UT8 332 aaPredicted RBP12.39□□□□□ -0.43
NUDCD3-202ENST00000355451 TRIM69Q86WT6 500 aa12.39□□□□□ -0.43
NUDCD3-202ENST00000355451 NLRP4Q96MN2 994 aa12.39□□□□□ -0.43
NUDCD3-202ENST00000355451 RASSF4Q9H2L5 321 aa12.39□□□□□ -0.43
NUDCD3-202ENST00000355451 UTP6Q9NYH9 597 aaKnown RBP12.39□□□□□ -0.43
NUDCD3-202ENST00000355451 PCDHB8Q9UN66 801 aa12.39□□□□□ -0.43
NUDCD3-202ENST00000355451 PRPSAP2O60256 369 aa12.39□□□□□ -0.43
NUDCD3-202ENST00000355451 DMC1Q14565 340 aa12.39□□□□□ -0.43
NUDCD3-202ENST00000355451 PARP10Q53GL7 1025 aa12.39□□□□□ -0.43
NUDCD3-202ENST00000355451 HEXIM2Q96MH2 286 aaKnown RBP12.39□□□□□ -0.43
NUDCD3-202ENST00000355451 WARS2Q9UGM6 360 aaKnown RBP12.39□□□□□ -0.43
NUDCD3-202ENST00000355451 GAPVD1Q14C86 1478 aa12.39□□□□□ -0.43
NUDCD3-202ENST00000355451 GOLGA8SH3BPF8 625 aa12.39□□□□□ -0.43
NUDCD3-202ENST00000355451 SCNN1DP51172 638 aa12.39□□□□□ -0.43
NUDCD3-202ENST00000355451 DOK7Q18PE1 504 aa12.39□□□□□ -0.43
NUDCD3-202ENST00000355451 NBPF15Q8N660 670 aa12.39□□□□□ -0.43
NUDCD3-202ENST00000355451 TADA1Q96BN2 335 aa12.39□□□□□ -0.43
NUDCD3-202ENST00000355451 KIAA1468Q9P260 1216 aa12.39□□□□□ -0.43
NUDCD3-202ENST00000355451 RASSF10A6NK89 507 aa12.39□□□□□ -0.43
NUDCD3-202ENST00000355451 ARHGAP30Q7Z6I6 1101 aaPredicted RBP12.39□□□□□ -0.43
NUDCD3-202ENST00000355451 PPP1R13BQ96KQ4 1090 aa12.39□□□□□ -0.43
NUDCD3-202ENST00000355451 GCKP35557 465 aa12.38□□□□□ -0.43
NUDCD3-202ENST00000355451 TBC1D10BQ4KMP7 808 aaPredicted RBP12.38□□□□□ -0.43
NUDCD3-202ENST00000355451 FBXO11Q86XK2 927 aa12.38□□□□□ -0.43
NUDCD3-202ENST00000355451 TEX2Q8IWB9 1127 aa12.38□□□□□ -0.43
NUDCD3-202ENST00000355451 FAM49AQ9H0Q0 323 aaPredicted RBP12.38□□□□□ -0.43
NUDCD3-202ENST00000355451 POLE3Q9NRF9 147 aa12.38□□□□□ -0.43
NUDCD3-202ENST00000355451 RIPOR2Q9Y4F9 1068 aa12.38□□□□□ -0.43
NUDCD3-202ENST00000355451 C5orf58C9J3I9 102 aa12.38□□□□□ -0.43
NUDCD3-202ENST00000355451 IDI1Q13907 227 aa12.38□□□□□ -0.43
NUDCD3-202ENST00000355451 SYTL3Q4VX76 610 aa12.38□□□□□ -0.43
NUDCD3-202ENST00000355451 C16orf87Q6PH81 154 aa12.38□□□□□ -0.43
NUDCD3-202ENST00000355451 TSC1Q92574 1164 aa12.38□□□□□ -0.43
NUDCD3-202ENST00000355451 DEPDC7Q96QD5 511 aa12.38□□□□□ -0.43
NUDCD3-202ENST00000355451 H2AFY2Q9P0M6 372 aaPredicted RBP12.38□□□□□ -0.43
NUDCD3-202ENST00000355451 STRIP2Q9ULQ0 834 aa12.38□□□□□ -0.43
NUDCD3-202ENST00000355451 SYNCRIPO60506 623 aaKnown RBP12.38□□□□□ -0.43
NUDCD3-202ENST00000355451 CYBBP04839 570 aa12.38□□□□□ -0.43
NUDCD3-202ENST00000355451 ATP1A1P05023 1023 aaKnown RBP12.38□□□□□ -0.43
NUDCD3-202ENST00000355451 TRIM71Q2Q1W2 868 aaKnown RBP12.38□□□□□ -0.43
NUDCD3-202ENST00000355451 CAB39Q9Y376 341 aaPredicted RBP12.38□□□□□ -0.43
NUDCD3-202ENST00000355451 AATKQ6ZMQ8 1374 aa12.38□□□□□ -0.43
NUDCD3-202ENST00000355451 WASLO00401 505 aaPredicted RBP12.38□□□□□ -0.43
NUDCD3-202ENST00000355451 MSH2P43246 934 aa12.38□□□□□ -0.43
NUDCD3-202ENST00000355451 NEK2P51955 445 aa12.38□□□□□ -0.43
NUDCD3-202ENST00000355451 HDDC2Q7Z4H3 204 aa12.38□□□□□ -0.43
NUDCD3-202ENST00000355451 EMILIN1Q9Y6C2 1016 aa12.38□□□□□ -0.43
NUDCD3-202ENST00000355451 OCA2Q04671 838 aa12.38□□□□□ -0.43
NUDCD3-202ENST00000355451 TAF1BQ53T94 588 aaPredicted RBP12.38□□□□□ -0.43
NUDCD3-202ENST00000355451 TWF2Q6IBS0 349 aaKnown RBP12.38□□□□□ -0.43
NUDCD3-202ENST00000355451 RNASE11Q8TAA1 199 aaKnown RBP12.38□□□□□ -0.43
NUDCD3-202ENST00000355451 SNTNA6NMZ2 147 aa12.38□□□□□ -0.43
NUDCD3-202ENST00000355451 BASP1P80723 227 aaKnown RBP12.38□□□□□ -0.43
NUDCD3-202ENST00000355451 HPCAP84074 193 aa12.38□□□□□ -0.43
NUDCD3-202ENST00000355451 SPATA5Q8NB90 893 aa12.38□□□□□ -0.43
NUDCD3-202ENST00000355451 IQCDQ96DY2 449 aa12.38□□□□□ -0.43
NUDCD3-202ENST00000355451 USP26Q9BXU7 913 aa12.38□□□□□ -0.43
NUDCD3-202ENST00000355451 PPP3CCP48454 512 aa12.38□□□□□ -0.43
NUDCD3-202ENST00000355451 BCAMP50895 628 aa12.38□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms