RNA–Protein interactions for RNA: ENST00000355396.7

SUSD1-201, Transcript of sushi domain containing 1, humanhuman

APPRIS ALT2 TSL 2

Gene SUSD1, Length 2,861 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUSD1-201ENST00000355396 ARL6IP4Q66PJ3 421 aaKnown RBP13.1□□□□□ -0.31
SUSD1-201ENST00000355396 LHX8Q68G74 356 aa13.1□□□□□ -0.31
SUSD1-201ENST00000355396 POTEDQ86YR6 584 aa13.1□□□□□ -0.31
SUSD1-201ENST00000355396 ZNF396Q96N95 335 aaPredicted RBP13.1□□□□□ -0.31
SUSD1-201ENST00000355396 DDX20Q9UHI6 824 aaKnown RBP13.1□□□□□ -0.31
SUSD1-201ENST00000355396 IPO5O00410 1097 aaKnown RBP13.09□□□□□ -0.31
SUSD1-201ENST00000355396 ARHGAP1Q07960 439 aa13.09□□□□□ -0.31
SUSD1-201ENST00000355396 ZNF174Q15697 407 aa13.09□□□□□ -0.31
SUSD1-201ENST00000355396 ANO1Q5XXA6 986 aa13.09□□□□□ -0.31
SUSD1-201ENST00000355396 FAM173BQ6P4H8 233 aa13.09□□□□□ -0.31
SUSD1-201ENST00000355396 XRN2Q9H0D6 950 aaKnown RBP eCLIP13.09□□□□□ -0.313e-9■■■■□ 20.4
SUSD1-201ENST00000355396 TMEM60Q9H2L4 133 aa13.09□□□□□ -0.31
SUSD1-201ENST00000355396 FARP2O94887 1054 aaPredicted RBP13.09□□□□□ -0.31
SUSD1-201ENST00000355396 GH1P01241 217 aa13.09□□□□□ -0.31
SUSD1-201ENST00000355396 MCM7P33993 719 aa13.09□□□□□ -0.31
SUSD1-201ENST00000355396 GJA9P57773 515 aa13.09□□□□□ -0.31
SUSD1-201ENST00000355396 LY6KQ17RY6 165 aa13.09□□□□□ -0.31
SUSD1-201ENST00000355396 SKOR2Q2VWA4 1001 aaPredicted RBP13.09□□□□□ -0.31
SUSD1-201ENST00000355396 METTL7BQ6UX53 244 aa13.09□□□□□ -0.31
SUSD1-201ENST00000355396 USP28Q96RU2 1077 aa13.09□□□□□ -0.31
SUSD1-201ENST00000355396 ZNF577Q9BSK1 485 aa13.09□□□□□ -0.31
SUSD1-201ENST00000355396 CEP131Q9UPN4 1083 aa13.09□□□□□ -0.31
SUSD1-201ENST00000355396 CTAGE5O15320 804 aa13.08□□□□□ -0.32
SUSD1-201ENST00000355396 ATG7O95352 703 aa13.08□□□□□ -0.32
SUSD1-201ENST00000355396 YEATS4O95619 227 aa13.08□□□□□ -0.32
SUSD1-201ENST00000355396 CST5P28325 142 aaPredicted RBP13.08□□□□□ -0.32
SUSD1-201ENST00000355396 SPIRE1Q08AE8 756 aa13.08□□□□□ -0.32
SUSD1-201ENST00000355396 PPP2R5CQ13362 524 aa13.08□□□□□ -0.32
SUSD1-201ENST00000355396 LAMC2Q13753 1193 aa13.08□□□□□ -0.32
SUSD1-201ENST00000355396 CALCRLQ16602 461 aa13.08□□□□□ -0.32
SUSD1-201ENST00000355396 KLHL40Q2TBA0 621 aa13.08□□□□□ -0.32
SUSD1-201ENST00000355396 TMEM63BQ5T3F8 832 aa13.08□□□□□ -0.32
SUSD1-201ENST00000355396 GZF1Q9H116 711 aaPredicted RBP13.08□□□□□ -0.32
SUSD1-201ENST00000355396 VAV3Q9UKW4 847 aa13.08□□□□□ -0.32
SUSD1-201ENST00000355396 CLIC4Q9Y696 253 aa13.08□□□□□ -0.32
SUSD1-201ENST00000355396 PRPF40AO75400 957 aaKnown RBP13.08□□□□□ -0.32
SUSD1-201ENST00000355396 OR52Z1P0C646 297 aa13.08□□□□□ -0.32
SUSD1-201ENST00000355396 PTGDRQ13258 359 aa13.08□□□□□ -0.32
SUSD1-201ENST00000355396 SLC39A14Q15043 492 aa13.08□□□□□ -0.32
SUSD1-201ENST00000355396 SF3A1Q15459 793 aaKnown RBP13.08□□□□□ -0.32
SUSD1-201ENST00000355396 GPT2Q8TD30 523 aa13.08□□□□□ -0.32
SUSD1-201ENST00000355396 UNC93B1Q9H1C4 597 aa13.08□□□□□ -0.32
SUSD1-201ENST00000355396 DOCK5Q9H7D0 1870 aa13.08□□□□□ -0.32
SUSD1-201ENST00000355396 A6NJR5 290 aa13.07□□□□□ -0.32
SUSD1-201ENST00000355396 ADAMTS4O75173 837 aa13.07□□□□□ -0.32
SUSD1-201ENST00000355396 CCL5P13501 91 aa13.07□□□□□ -0.32
SUSD1-201ENST00000355396 FXR2P51116 673 aaKnown RBP eCLIP13.07□□□□□ -0.32
SUSD1-201ENST00000355396 ZNF746Q6NUN9 644 aaPredicted RBP13.07□□□□□ -0.32
SUSD1-201ENST00000355396 LINC00301Q8NCQ3 95 aa13.07□□□□□ -0.32
SUSD1-201ENST00000355396 RDM1Q8NG50 284 aa13.07□□□□□ -0.32
SUSD1-201ENST00000355396 CRISPLD2Q9H0B8 497 aa13.07□□□□□ -0.32
SUSD1-201ENST00000355396 RCOR1Q9UKL0 485 aa13.07□□□□□ -0.32
SUSD1-201ENST00000355396 CFAP45Q9UL16 551 aa13.07□□□□□ -0.32
SUSD1-201ENST00000355396 HTTP42858 3142 aa13.07□□□□□ -0.32
SUSD1-201ENST00000355396 MTFR1Q15390 333 aa13.07□□□□□ -0.32
SUSD1-201ENST00000355396 KLHDC9Q8NEP7 349 aa13.07□□□□□ -0.32
SUSD1-201ENST00000355396 PPTC7Q8NI37 304 aa13.07□□□□□ -0.32
SUSD1-201ENST00000355396 SDF4Q9BRK5 362 aa13.07□□□□□ -0.32
SUSD1-201ENST00000355396 PPP6R2O75170 966 aa13.06□□□□□ -0.32
SUSD1-201ENST00000355396 GGPS1O95749 300 aa13.06□□□□□ -0.32
SUSD1-201ENST00000355396 ATP2B1P20020 1258 aa13.06□□□□□ -0.32
SUSD1-201ENST00000355396 KRT76Q01546 638 aa13.06□□□□□ -0.32
SUSD1-201ENST00000355396 PDIA5Q14554 519 aa13.06□□□□□ -0.32
SUSD1-201ENST00000355396 FOXD4L6Q3SYB3 417 aaPredicted RBP13.06□□□□□ -0.32
SUSD1-201ENST00000355396 CCSAPQ6IQ19 270 aaPredicted RBP13.06□□□□□ -0.32
SUSD1-201ENST00000355396 FOXD4L3Q6VB84 417 aaPredicted RBP13.06□□□□□ -0.32
SUSD1-201ENST00000355396 TEKT3Q9BXF9 490 aa13.06□□□□□ -0.32
SUSD1-201ENST00000355396 BCAS3Q9H6U6 928 aa13.06□□□□□ -0.32
SUSD1-201ENST00000355396 SLC9A2Q9UBY0 812 aa13.06□□□□□ -0.32
SUSD1-201ENST00000355396 IGKV6D-21A0A0A0MT36 114 aa13.06□□□□□ -0.32
SUSD1-201ENST00000355396 RARBP10826 455 aa13.06□□□□□ -0.32
SUSD1-201ENST00000355396 DNM1Q05193 864 aaKnown RBP13.06□□□□□ -0.32
SUSD1-201ENST00000355396 LRCH2Q5VUJ6 765 aa13.06□□□□□ -0.32
SUSD1-201ENST00000355396 TLK2Q86UE8 772 aa13.06□□□□□ -0.32
SUSD1-201ENST00000355396 DHX37Q8IY37 1157 aaKnown RBP13.06□□□□□ -0.32
SUSD1-201ENST00000355396 IGSF22Q8N9C0 903 aa13.06□□□□□ -0.32
SUSD1-201ENST00000355396 COPS5Q92905 334 aa13.06□□□□□ -0.32
SUSD1-201ENST00000355396 FTOQ9C0B1 505 aaKnown RBP eCLIP13.06□□□□□ -0.32
SUSD1-201ENST00000355396 JPH1Q9HDC5 661 aaPredicted RBP13.06□□□□□ -0.32
SUSD1-201ENST00000355396 OGDHLQ9ULD0 1010 aa13.06□□□□□ -0.32
SUSD1-201ENST00000355396 SYNRGQ9UMZ2 1314 aa13.06□□□□□ -0.32
SUSD1-201ENST00000355396 CCNE2O96020 404 aa13.06□□□□□ -0.32
SUSD1-201ENST00000355396 GJB1P08034 283 aa13.06□□□□□ -0.32
SUSD1-201ENST00000355396 IL17AQ16552 155 aa13.06□□□□□ -0.32
SUSD1-201ENST00000355396 SMAP1Q8IYB5 467 aaPredicted RBP13.06□□□□□ -0.32
SUSD1-201ENST00000355396 TMEM87AQ8NBN3 555 aa13.06□□□□□ -0.32
SUSD1-201ENST00000355396 GPR20Q99678 358 aa13.06□□□□□ -0.32
SUSD1-201ENST00000355396 GAS7O60861 476 aa13.05□□□□□ -0.32
SUSD1-201ENST00000355396 SFNP31947 248 aa13.05□□□□□ -0.32
SUSD1-201ENST00000355396 CYFIP1Q7L576 1253 aa13.05□□□□□ -0.32
SUSD1-201ENST00000355396 FERMT2Q96AC1 680 aa13.05□□□□□ -0.32
SUSD1-201ENST00000355396 GDPD2Q9HCC8 539 aa13.05□□□□□ -0.32
SUSD1-201ENST00000355396 PCDHA12Q9UN75 941 aa13.05□□□□□ -0.32
SUSD1-201ENST00000355396 SRPRBQ9Y5M8 271 aaKnown RBP13.05□□□□□ -0.32
SUSD1-201ENST00000355396 ELP1O95163 1332 aa13.05□□□□□ -0.32
SUSD1-201ENST00000355396 GSTTP1A0A1W2PQM5 241 aa13.05□□□□□ -0.32
SUSD1-201ENST00000355396 LGR5O75473 907 aa13.05□□□□□ -0.32
SUSD1-201ENST00000355396 CNGA1P29973 690 aa13.05□□□□□ -0.32
SUSD1-201ENST00000355396 KRT85P78386 507 aa13.05□□□□□ -0.32
SUSD1-201ENST00000355396 GJC2Q5T442 439 aaPredicted RBP13.05□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms