RNA–Protein interactions for RNA: ENST00000351948.8

SMC6-201, Transcript of structural maintenance of chromosomes 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMC6, Length 5,173 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC6-201ENST00000351948 GAP43P17677 238 aa15.01□□□□□ -0.01
SMC6-201ENST00000351948 PSMC2P35998 433 aaKnown RBP15.01□□□□□ -0.01
SMC6-201ENST00000351948 CASP7P55210 303 aa15.01□□□□□ -0.01
SMC6-201ENST00000351948 PPP2R5DQ14738 602 aa15.01□□□□□ -0.01
SMC6-201ENST00000351948 RPS6KA1Q15418 735 aa15.01□□□□□ -0.01
SMC6-201ENST00000351948 SWSAP1Q6NVH7 229 aa15.01□□□□□ -0.01
SMC6-201ENST00000351948 BBXQ8WY36 941 aaPredicted RBP15.01□□□□□ -0.01
SMC6-201ENST00000351948 FAM193BQ96PV7 902 aaPredicted RBP15.01□□□□□ -0.01
SMC6-201ENST00000351948 RPS6KC1Q96S38 1066 aa15.01□□□□□ -0.01
SMC6-201ENST00000351948 IPO5O00410 1097 aaKnown RBP15.01□□□□□ -0.01
SMC6-201ENST00000351948 MYL3P08590 195 aa15.01□□□□□ -0.01
SMC6-201ENST00000351948 LACTBP83111 547 aaPredicted RBP15.01□□□□□ -0.01
SMC6-201ENST00000351948 PHLDB2Q86SQ0 1253 aa15.01□□□□□ -0.01
SMC6-201ENST00000351948 THNSL1Q8IYQ7 743 aa15.01□□□□□ -0.01
SMC6-201ENST00000351948 TUBB4AP04350 444 aa15.01□□□□□ -0.01
SMC6-201ENST00000351948 LRRC8AQ8IWT6 810 aa15.01□□□□□ -0.01
SMC6-201ENST00000351948 MTFR1LQ9H019 292 aa15.01□□□□□ -0.01
SMC6-201ENST00000351948 FBXO28Q9NVF7 368 aa15.01□□□□□ -0.01
SMC6-201ENST00000351948 RBL2Q08999 1139 aa15□□□□□ -0.01
SMC6-201ENST00000351948 NBPF9Q3BBW0 867 aa15□□□□□ -0.01
SMC6-201ENST00000351948 RNF187Q5TA31 235 aaPredicted RBP15□□□□□ -0.01
SMC6-201ENST00000351948 UBLCP1Q8WVY7 318 aaPredicted RBP15□□□□□ -0.01
SMC6-201ENST00000351948 TSC1Q92574 1164 aa15□□□□□ -0.01
SMC6-201ENST00000351948 MRFAP1L1Q96HT8 127 aa15□□□□□ -0.01
SMC6-201ENST00000351948 K7ERI5 159 aa15□□□□□ -0.01
SMC6-201ENST00000351948 ENTPD3O75355 529 aa15□□□□□ -0.01
SMC6-201ENST00000351948 PDHBP11177 359 aa15□□□□□ -0.01
SMC6-201ENST00000351948 UAP1Q16222 522 aaPredicted RBP15□□□□□ -0.01
SMC6-201ENST00000351948 SFR1Q86XK3 245 aa15□□□□□ -0.01
SMC6-201ENST00000351948 ACAD9Q9H845 621 aa15□□□□□ -0.01
SMC6-201ENST00000351948 SERPINA10Q9UK55 444 aa15□□□□□ -0.01
SMC6-201ENST00000351948 ATP2C2O75185 946 aa15□□□□□ -0.01
SMC6-201ENST00000351948 IQCGQ9H095 443 aaKnown RBP15□□□□□ -0.01
SMC6-201ENST00000351948 GABBR1Q9UBS5 961 aa15□□□□□ -0.01
SMC6-201ENST00000351948 FBXO40Q9UH90 709 aa15□□□□□ -0.01
SMC6-201ENST00000351948 ZNF215Q9UL58 517 aaPredicted RBP15□□□□□ -0.01
SMC6-201ENST00000351948 FGFR2P21802 821 aa15□□□□□ -0.01
SMC6-201ENST00000351948 PDE6CP51160 858 aa15□□□□□ -0.01
SMC6-201ENST00000351948 ZNF365Q70YC5 407 aa15□□□□□ -0.01
SMC6-201ENST00000351948 RGL1Q9NZL6 768 aa15□□□□□ -0.01
SMC6-201ENST00000351948 PYCARDQ9ULZ3 195 aa15□□□□□ -0.01
SMC6-201ENST00000351948 CD58P19256 250 aa14.99□□□□□ -0.01
SMC6-201ENST00000351948 U2AF2P26368 475 aaKnown RBP eCLIP14.99□□□□□ -0.011e-8■■■■□ 20
SMC6-201ENST00000351948 PPP1R21Q6ZMI0 780 aa14.99□□□□□ -0.01
SMC6-201ENST00000351948 TAB3Q8N5C8 712 aaPredicted RBP14.99□□□□□ -0.01
SMC6-201ENST00000351948 ZNF280CQ8ND82 737 aa14.99□□□□□ -0.01
SMC6-201ENST00000351948 MTA3Q9BTC8 594 aa14.99□□□□□ -0.01
SMC6-201ENST00000351948 PRR12Q9ULL5 1215 aa14.99□□□□□ -0.01
SMC6-201ENST00000351948 PPP2R2CQ9Y2T4 447 aa14.99□□□□□ -0.01
SMC6-201ENST00000351948 CCNE1P24864 410 aa14.99□□□□□ -0.01
SMC6-201ENST00000351948 PRELPP51888 382 aa14.99□□□□□ -0.01
SMC6-201ENST00000351948 BAATQ14032 418 aaPredicted RBP14.99□□□□□ -0.01
SMC6-201ENST00000351948 IPO4Q8TEX9 1081 aaKnown RBP14.99□□□□□ -0.01
SMC6-201ENST00000351948 NUCKS1Q9H1E3 243 aaKnown RBP14.99□□□□□ -0.01
SMC6-201ENST00000351948 ASIC3Q9UHC3 531 aa14.99□□□□□ -0.01
SMC6-201ENST00000351948 E7EVH7 732 aa14.99□□□□□ -0.01
SMC6-201ENST00000351948 PADI6Q6TGC4 694 aa14.99□□□□□ -0.01
SMC6-201ENST00000351948 SCARA5Q6ZMJ2 495 aa14.99□□□□□ -0.01
SMC6-201ENST00000351948 ACER1Q8TDN7 264 aa14.99□□□□□ -0.01
SMC6-201ENST00000351948 MMP19Q99542 508 aa14.99□□□□□ -0.01
SMC6-201ENST00000351948 SELENOSQ9BQE4 189 aa14.99□□□□□ -0.01
SMC6-201ENST00000351948 PCDHB4Q9Y5E5 795 aa14.99□□□□□ -0.01
SMC6-201ENST00000351948 AFPP02771 609 aaKnown RBP14.99□□□□□ -0.01
SMC6-201ENST00000351948 ECE1P42892 770 aa14.99□□□□□ -0.01
SMC6-201ENST00000351948 CXCL9Q07325 125 aa14.99□□□□□ -0.01
SMC6-201ENST00000351948 ELF2Q15723 593 aa14.99□□□□□ -0.01
SMC6-201ENST00000351948 NT5C1BQ96P26 610 aa14.99□□□□□ -0.01
SMC6-201ENST00000351948 NEURL4Q96JN8 1562 aa14.99□□□□□ -0.01
SMC6-201ENST00000351948 WDR64B1ANS9 1081 aa14.98□□□□□ -0.01
SMC6-201ENST00000351948 COG2Q14746 738 aa14.98□□□□□ -0.01
SMC6-201ENST00000351948 C9orf131Q5VYM1 1079 aa14.98□□□□□ -0.01
SMC6-201ENST00000351948 SHC4Q6S5L8 630 aa14.98□□□□□ -0.01
SMC6-201ENST00000351948 ABI1Q8IZP0 508 aa14.98□□□□□ -0.01
SMC6-201ENST00000351948 CCDC63Q8NA47 563 aa14.98□□□□□ -0.01
SMC6-201ENST00000351948 SLC16A4O15374 487 aa14.98□□□□□ -0.01
SMC6-201ENST00000351948 VPS41P49754 854 aa14.98□□□□□ -0.01
SMC6-201ENST00000351948 CCDC77Q9BR77 488 aa14.98□□□□□ -0.01
SMC6-201ENST00000351948 GCNT4Q9P109 453 aa14.98□□□□□ -0.01
SMC6-201ENST00000351948 KCNK3O14649 394 aa14.98□□□□□ -0.01
SMC6-201ENST00000351948 FCER1AP12319 257 aa14.98□□□□□ -0.01
SMC6-201ENST00000351948 RCAN1P53805 252 aa14.98□□□□□ -0.01
SMC6-201ENST00000351948 CCDC117Q8IWD4 279 aaPredicted RBP14.98□□□□□ -0.01
SMC6-201ENST00000351948 C7orf31Q8N865 590 aa14.98□□□□□ -0.01
SMC6-201ENST00000351948 FAM133AQ8N9E0 248 aa14.98□□□□□ -0.01
SMC6-201ENST00000351948 CCDC26Q8TAB7 109 aa14.98□□□□□ -0.01
SMC6-201ENST00000351948 TSNARE1Q96NA8 513 aa14.98□□□□□ -0.01
SMC6-201ENST00000351948 JPH2Q9BR39 696 aaPredicted RBP14.98□□□□□ -0.01
SMC6-201ENST00000351948 MTRF1LQ9UGC7 380 aaKnown RBP14.98□□□□□ -0.01
SMC6-201ENST00000351948 EPN1Q9Y6I3 576 aaPredicted RBP14.98□□□□□ -0.01
SMC6-201ENST00000351948 GOLGA6L7A0A1B0GV03 622 aa14.98□□□□□ -0.01
SMC6-201ENST00000351948 N4BP1O75113 896 aaKnown RBP14.98□□□□□ -0.01
SMC6-201ENST00000351948 IFNB1P01574 187 aa14.98□□□□□ -0.01
SMC6-201ENST00000351948 NT5C2P49902 561 aa14.98□□□□□ -0.01
SMC6-201ENST00000351948 CYFIP1Q7L576 1253 aa14.98□□□□□ -0.01
SMC6-201ENST00000351948 HPS3Q969F9 1004 aa14.98□□□□□ -0.01
SMC6-201ENST00000351948 RIC8AQ9NPQ8 531 aa14.98□□□□□ -0.01
SMC6-201ENST00000351948 CAMTA1Q9Y6Y1 1673 aa14.98□□□□□ -0.01
SMC6-201ENST00000351948 MAN2A1Q16706 1144 aa14.97□□□□□ -0.01
SMC6-201ENST00000351948 NAA35Q5VZE5 725 aa14.97□□□□□ -0.01
SMC6-201ENST00000351948 RSPH3Q86UC2 560 aa14.97□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 116.1 ms