RNA–Protein interactions for RNA: ENST00000349379.5

SNX3-202, Transcript of sorting nexin 3, humanhuman

TSL 2 BASIC

Gene SNX3, Length 890 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX3-202ENST00000349379 PRDM5Q9NQX1 630 aaPredicted RBP25.22■■□□□ 1.63
SNX3-202ENST00000349379 ORC3Q9UBD5 711 aaPredicted RBP25.22■■□□□ 1.63
SNX3-202ENST00000349379 PRKAG2Q9UGJ0 569 aa25.22■■□□□ 1.63
SNX3-202ENST00000349379 KAT6AQ92794 2004 aa25.21■■□□□ 1.63
SNX3-202ENST00000349379 HAS3O00219 553 aa25.21■■□□□ 1.63
SNX3-202ENST00000349379 MEIS1O00470 390 aa25.21■■□□□ 1.63
SNX3-202ENST00000349379 SORBS3O60504 671 aa25.21■■□□□ 1.63
SNX3-202ENST00000349379 DTNBO60941 627 aa25.21■■□□□ 1.63
SNX3-202ENST00000349379 NBPF20Q3BBV1 942 aa25.21■■□□□ 1.63
SNX3-202ENST00000349379 NFRKBQ6P4R8 1299 aa25.21■■□□□ 1.63
SNX3-202ENST00000349379 BACH2Q9BYV9 841 aa25.21■■□□□ 1.63
SNX3-202ENST00000349379 KCNH7Q9NS40 1196 aa25.21■■□□□ 1.63
SNX3-202ENST00000349379 TLR3O15455 904 aaKnown RBP25.2■■□□□ 1.62
SNX3-202ENST00000349379 EDIL3O43854 480 aa25.2■■□□□ 1.62
SNX3-202ENST00000349379 ITGB8P26012 769 aa25.2■■□□□ 1.62
SNX3-202ENST00000349379 PTPN11Q06124 597 aaPredicted RBP25.2■■□□□ 1.62
SNX3-202ENST00000349379 SESTD1Q86VW0 696 aa25.2■■□□□ 1.62
SNX3-202ENST00000349379 BLIDQ8IZY5 108 aa25.2■■□□□ 1.62
SNX3-202ENST00000349379 GPR20Q99678 358 aa25.2■■□□□ 1.62
SNX3-202ENST00000349379 C16orf70Q9BSU1 422 aa25.2■■□□□ 1.62
SNX3-202ENST00000349379 PHF20Q9BVI0 1012 aa25.2■■□□□ 1.62
SNX3-202ENST00000349379 TMEM39AQ9NV64 488 aa25.2■■□□□ 1.62
SNX3-202ENST00000349379 TRIOBPQ9H2D6 2365 aa25.19■■□□□ 1.62
SNX3-202ENST00000349379 IGLV3-22A0A075B6J6 115 aa25.19■■□□□ 1.62
SNX3-202ENST00000349379 FAM86B1E9PN63 330 aa25.19■■□□□ 1.62
SNX3-202ENST00000349379 B4GALT4O60513 344 aa25.19■■□□□ 1.62
SNX3-202ENST00000349379 FAM86B2P0C5J1 330 aa25.19■■□□□ 1.62
SNX3-202ENST00000349379 ARP10275 920 aa25.19■■□□□ 1.62
SNX3-202ENST00000349379 CIITAP33076 1130 aa25.19■■□□□ 1.62
SNX3-202ENST00000349379 WASF1Q92558 559 aa25.19■■□□□ 1.62
SNX3-202ENST00000349379 ZSCAN31Q96LW9 406 aaPredicted RBP25.19■■□□□ 1.62
SNX3-202ENST00000349379 TELO2Q9Y4R8 837 aa25.19■■□□□ 1.62
SNX3-202ENST00000349379 TANC1Q9C0D5 1861 aa25.19■■□□□ 1.62
SNX3-202ENST00000349379 NFASCO94856 1347 aa25.18■■□□□ 1.62
SNX3-202ENST00000349379 JAK2O60674 1132 aa25.18■■□□□ 1.62
SNX3-202ENST00000349379 ZNF286BP0CG31 522 aa25.18■■□□□ 1.62
SNX3-202ENST00000349379 MDM2Q00987 491 aaPredicted RBP25.18■■□□□ 1.62
SNX3-202ENST00000349379 ALG1Q9BT22 464 aa25.18■■□□□ 1.62
SNX3-202ENST00000349379 KATNAL1Q9BW62 490 aa25.18■■□□□ 1.62
SNX3-202ENST00000349379 SH2B1Q9NRF2 756 aaPredicted RBP25.18■■□□□ 1.62
SNX3-202ENST00000349379 GJB4Q9NTQ9 266 aa25.18■■□□□ 1.62
SNX3-202ENST00000349379 KCNJ14Q9UNX9 436 aa25.18■■□□□ 1.62
SNX3-202ENST00000349379 NOP56O00567 594 aaKnown RBP25.17■■□□□ 1.62
SNX3-202ENST00000349379 LGALS2P05162 132 aa25.17■■□□□ 1.62
SNX3-202ENST00000349379 XBP1P17861 261 aa25.17■■□□□ 1.62
SNX3-202ENST00000349379 PSEN2P49810 448 aa25.17■■□□□ 1.62
SNX3-202ENST00000349379 LBHD1Q9BQE6 289 aaPredicted RBP25.17■■□□□ 1.62
SNX3-202ENST00000349379 TRPV6Q9H1D0 765 aa25.17■■□□□ 1.62
SNX3-202ENST00000349379 AGO4Q9HCK5 861 aaKnown RBP25.17■■□□□ 1.62
SNX3-202ENST00000349379 A0A1W2PPC1 479 aa25.16■■□□□ 1.62
SNX3-202ENST00000349379 ZNF76P36508 570 aa25.16■■□□□ 1.62
SNX3-202ENST00000349379 RANBP2P49792 3224 aaKnown RBP25.16■■□□□ 1.62
SNX3-202ENST00000349379 MFSD10Q14728 455 aa25.16■■□□□ 1.62
SNX3-202ENST00000349379 CCDC83Q8IWF9 413 aa25.16■■□□□ 1.62
SNX3-202ENST00000349379 PPP1R13LQ8WUF5 828 aa25.16■■□□□ 1.62
SNX3-202ENST00000349379 BADQ92934 168 aa25.16■■□□□ 1.62
SNX3-202ENST00000349379 LLPHQ9BRT6 129 aaKnown RBP25.16■■□□□ 1.62
SNX3-202ENST00000349379 TRMT13Q9NUP7 481 aaKnown RBP25.16■■□□□ 1.62
SNX3-202ENST00000349379 MYH9P35579 1960 aaKnown RBP25.16■■□□□ 1.62
SNX3-202ENST00000349379 TIMP1P01033 207 aa25.15■■□□□ 1.62
SNX3-202ENST00000349379 RAG1P15918 1043 aa25.15■■□□□ 1.62
SNX3-202ENST00000349379 USP11P51784 963 aa25.15■■□□□ 1.62
SNX3-202ENST00000349379 ITGB3BPQ13352 177 aaPredicted RBP25.15■■□□□ 1.62
SNX3-202ENST00000349379 PLA2G4DQ86XP0 818 aa25.15■■□□□ 1.62
SNX3-202ENST00000349379 LENG9Q96B70 501 aa25.15■■□□□ 1.62
SNX3-202ENST00000349379 PKD2L1Q9P0L9 805 aa25.15■■□□□ 1.62
SNX3-202ENST00000349379 GSTTP1A0A1W2PQM5 241 aa25.14■■□□□ 1.62
SNX3-202ENST00000349379 ST18O60284 1047 aa25.14■■□□□ 1.62
SNX3-202ENST00000349379 SETQ01105 290 aaPredicted RBP25.14■■□□□ 1.62
SNX3-202ENST00000349379 KIAA0753Q2KHM9 967 aa25.14■■□□□ 1.62
SNX3-202ENST00000349379 FAM47CQ5HY64 1035 aa25.14■■□□□ 1.62
SNX3-202ENST00000349379 HABP4Q5JVS0 413 aaKnown RBP25.14■■□□□ 1.62
SNX3-202ENST00000349379 TBCKQ8TEA7 893 aa25.14■■□□□ 1.62
SNX3-202ENST00000349379 CTAGE1Q96RT6 745 aa25.14■■□□□ 1.62
SNX3-202ENST00000349379 JPH1Q9HDC5 661 aaPredicted RBP25.14■■□□□ 1.62
SNX3-202ENST00000349379 GTF2IRD1Q9UHL9 959 aa25.14■■□□□ 1.62
SNX3-202ENST00000349379 SCN5AQ14524 2016 aa25.13■■□□□ 1.61
SNX3-202ENST00000349379 H3BRB1 525 aa25.13■■□□□ 1.61
SNX3-202ENST00000349379 SUPT20HL2P0C7V6 817 aa25.13■■□□□ 1.61
SNX3-202ENST00000349379 SEPT1Q8WYJ6 367 aa25.13■■□□□ 1.61
SNX3-202ENST00000349379 NOC4LQ9BVI4 516 aaKnown RBP25.13■■□□□ 1.61
SNX3-202ENST00000349379 TUT1Q9H6E5 874 aaKnown RBP25.13■■□□□ 1.61
SNX3-202ENST00000349379 HDAC6Q9UBN7 1215 aa25.13■■□□□ 1.61
SNX3-202ENST00000349379 SLC9A2Q9UBY0 812 aa25.13■■□□□ 1.61
SNX3-202ENST00000349379 DHX15O43143 795 aaKnown RBP25.12■■□□□ 1.61
SNX3-202ENST00000349379 CD2BP2O95400 341 aaKnown RBP25.12■■□□□ 1.61
SNX3-202ENST00000349379 TCF7P36402 384 aaPredicted RBP25.12■■□□□ 1.61
SNX3-202ENST00000349379 SP4Q02446 784 aa25.12■■□□□ 1.61
SNX3-202ENST00000349379 GDF6Q6KF10 455 aaPredicted RBP25.12■■□□□ 1.61
SNX3-202ENST00000349379 MFSD5Q6N075 450 aa25.12■■□□□ 1.61
SNX3-202ENST00000349379 KRT25Q7Z3Z0 450 aa25.12■■□□□ 1.61
SNX3-202ENST00000349379 SDF4Q9BRK5 362 aa25.12■■□□□ 1.61
SNX3-202ENST00000349379 UBE2OQ9C0C9 1292 aaKnown RBP25.12■■□□□ 1.61
SNX3-202ENST00000349379 CYP3A7-CYP3A51PA0A087WV96 503 aa25.11■■□□□ 1.61
SNX3-202ENST00000349379 CYP3A7P24462 503 aa25.11■■□□□ 1.61
SNX3-202ENST00000349379 HOXC8P31273 242 aa25.11■■□□□ 1.61
SNX3-202ENST00000349379 MOXD1Q6UVY6 613 aa25.11■■□□□ 1.61
SNX3-202ENST00000349379 TRIM50Q86XT4 487 aa25.11■■□□□ 1.61
SNX3-202ENST00000349379 OXER1Q8TDS5 423 aa25.11■■□□□ 1.61
SNX3-202ENST00000349379 MBOAT7Q96N66 472 aa25.11■■□□□ 1.61
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms