RNA–Protein interactions for RNA: ENST00000348749.9

CHRNA1-202, Transcript of cholinergic receptor nicotinic alpha 1 subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHRNA1, Length 1,984 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA1-202ENST00000348749 IRF6O14896 467 aa11.34□□□□□ -0.59
CHRNA1-202ENST00000348749 PECAM1P16284 738 aaPredicted RBP11.34□□□□□ -0.59
CHRNA1-202ENST00000348749 TMOD1P28289 359 aa11.34□□□□□ -0.59
CHRNA1-202ENST00000348749 ECHS1P30084 290 aa11.34□□□□□ -0.59
CHRNA1-202ENST00000348749 EIF4A3P38919 411 aaKnown RBP11.34□□□□□ -0.59
CHRNA1-202ENST00000348749 MAGEA1P43355 309 aa11.34□□□□□ -0.59
CHRNA1-202ENST00000348749 BCAMP50895 628 aa11.34□□□□□ -0.59
CHRNA1-202ENST00000348749 TNNC1P63316 161 aa11.34□□□□□ -0.59
CHRNA1-202ENST00000348749 CCDC178Q5BJE1 867 aa11.34□□□□□ -0.59
CHRNA1-202ENST00000348749 TYW1BQ6NUM6 668 aa11.34□□□□□ -0.59
CHRNA1-202ENST00000348749 ARHGAP27Q6ZUM4 889 aa11.34□□□□□ -0.59
CHRNA1-202ENST00000348749 DAGLBQ8NCG7 672 aa11.34□□□□□ -0.59
CHRNA1-202ENST00000348749 CNKSR1Q969H4 720 aa11.34□□□□□ -0.59
CHRNA1-202ENST00000348749 CHMP6Q96FZ7 201 aa11.34□□□□□ -0.59
CHRNA1-202ENST00000348749 AK8Q96MA6 479 aa11.34□□□□□ -0.59
CHRNA1-202ENST00000348749 INPP4AQ96PE3 977 aaPredicted RBP11.34□□□□□ -0.59
CHRNA1-202ENST00000348749 KRT12Q99456 494 aa11.34□□□□□ -0.59
CHRNA1-202ENST00000348749 MOV10L1Q9BXT6 1211 aaKnown RBP11.34□□□□□ -0.59
CHRNA1-202ENST00000348749 KCNMB3Q9NPA1 279 aa11.34□□□□□ -0.59
CHRNA1-202ENST00000348749 ABCB11O95342 1321 aa11.33□□□□□ -0.6
CHRNA1-202ENST00000348749 CES2O00748 559 aa11.33□□□□□ -0.6
CHRNA1-202ENST00000348749 ASAP2O43150 1006 aa11.33□□□□□ -0.6
CHRNA1-202ENST00000348749 RAD51CO43502 376 aa11.33□□□□□ -0.6
CHRNA1-202ENST00000348749 KLRC4O43908 158 aa11.33□□□□□ -0.6
CHRNA1-202ENST00000348749 PRDM1O75626 825 aa11.33□□□□□ -0.6
CHRNA1-202ENST00000348749 SSR1P43307 286 aaKnown RBP11.33□□□□□ -0.6
CHRNA1-202ENST00000348749 GNAQP50148 359 aa11.33□□□□□ -0.6
CHRNA1-202ENST00000348749 TRAF1Q13077 416 aa11.33□□□□□ -0.6
CHRNA1-202ENST00000348749 UBE4AQ14139 1066 aa11.33□□□□□ -0.6
CHRNA1-202ENST00000348749 ERMARDQ5T6L9 678 aa11.33□□□□□ -0.6
CHRNA1-202ENST00000348749 PIK3AP1Q6ZUJ8 805 aa11.33□□□□□ -0.6
CHRNA1-202ENST00000348749 CSGALNACT2Q8N6G5 542 aa11.33□□□□□ -0.6
CHRNA1-202ENST00000348749 ANKS4BQ8N8V4 417 aa11.33□□□□□ -0.6
CHRNA1-202ENST00000348749 MIGA1Q8NAN2 632 aa11.33□□□□□ -0.6
CHRNA1-202ENST00000348749 MTMR8Q96EF0 704 aa11.33□□□□□ -0.6
CHRNA1-202ENST00000348749 CNOT6LQ96LI5 555 aaKnown RBP11.33□□□□□ -0.6
CHRNA1-202ENST00000348749 PCMTD1Q96MG8 357 aaPredicted RBP11.33□□□□□ -0.6
CHRNA1-202ENST00000348749 ZNF570Q96NI8 536 aa11.33□□□□□ -0.6
CHRNA1-202ENST00000348749 KBTBD4Q9NVX7 518 aa11.33□□□□□ -0.6
CHRNA1-202ENST00000348749 TMEM59LQ9UK28 342 aa11.33□□□□□ -0.6
CHRNA1-202ENST00000348749 ZBTB1Q9Y2K1 713 aa11.33□□□□□ -0.6
CHRNA1-202ENST00000348749 SLIT2O94813 1529 aa11.32□□□□□ -0.6
CHRNA1-202ENST00000348749 SSU72P8A0A1W2PR75 194 aa11.32□□□□□ -0.6
CHRNA1-202ENST00000348749 RBAK-RBAKDNI3L0D1 243 aa11.32□□□□□ -0.6
CHRNA1-202ENST00000348749 AKR1B10O60218 316 aa11.32□□□□□ -0.6
CHRNA1-202ENST00000348749 ATP2C2O75185 946 aa11.32□□□□□ -0.6
CHRNA1-202ENST00000348749 CTNNA1P35221 906 aaKnown RBP11.32□□□□□ -0.6
CHRNA1-202ENST00000348749 EVA1CP58658 441 aa11.32□□□□□ -0.6
CHRNA1-202ENST00000348749 BLMHQ13867 455 aa11.32□□□□□ -0.6
CHRNA1-202ENST00000348749 IL17AQ16552 155 aa11.32□□□□□ -0.6
CHRNA1-202ENST00000348749 ASTE1Q2TB18 679 aaPredicted RBP11.32□□□□□ -0.6
CHRNA1-202ENST00000348749 SBK1Q52WX2 424 aa11.32□□□□□ -0.6
CHRNA1-202ENST00000348749 DTHD1Q6ZMT9 781 aa11.32□□□□□ -0.6
CHRNA1-202ENST00000348749 BRINP3Q76B58 766 aa11.32□□□□□ -0.6
CHRNA1-202ENST00000348749 C2CD5Q86YS7 1000 aa11.32□□□□□ -0.6
CHRNA1-202ENST00000348749 BLIDQ8IZY5 108 aa11.32□□□□□ -0.6
CHRNA1-202ENST00000348749 SRBD1Q8N5C6 995 aaKnown RBP11.32□□□□□ -0.6
CHRNA1-202ENST00000348749 XPO6Q96QU8 1125 aaKnown RBP11.32□□□□□ -0.6
CHRNA1-202ENST00000348749 NOC4LQ9BVI4 516 aaKnown RBP11.32□□□□□ -0.6
CHRNA1-202ENST00000348749 FAM129AQ9BZQ8 928 aa11.32□□□□□ -0.6
CHRNA1-202ENST00000348749 SLC5A4Q9NY91 659 aa11.32□□□□□ -0.6
CHRNA1-202ENST00000348749 PCDHA4Q9UN74 947 aa11.32□□□□□ -0.6
CHRNA1-202ENST00000348749 BAZ2AQ9UIF9 1905 aaKnown RBP11.32□□□□□ -0.6
CHRNA1-202ENST00000348749 SCN7AQ01118 1682 aa11.32□□□□□ -0.6
CHRNA1-202ENST00000348749 MAST2Q6P0Q8 1798 aa11.32□□□□□ -0.6
CHRNA1-202ENST00000348749 MYH1P12882 1939 aa11.32□□□□□ -0.6
CHRNA1-202ENST00000348749 A0A0G2JS52 829 aa11.32□□□□□ -0.6
CHRNA1-202ENST00000348749 A6NHS1 94 aa11.32□□□□□ -0.6
CHRNA1-202ENST00000348749 PHF20L1A8MW92 1017 aa11.32□□□□□ -0.6
CHRNA1-202ENST00000348749 AHCYL1O43865 530 aa11.32□□□□□ -0.6
CHRNA1-202ENST00000348749 LUC7L3O95232 432 aaKnown RBP11.32□□□□□ -0.6
CHRNA1-202ENST00000348749 FESP07332 822 aa11.32□□□□□ -0.6
CHRNA1-202ENST00000348749 CCNE1P24864 410 aa11.32□□□□□ -0.6
CHRNA1-202ENST00000348749 MCM7P33993 719 aa11.32□□□□□ -0.6
CHRNA1-202ENST00000348749 ORC2Q13416 577 aaPredicted RBP11.32□□□□□ -0.6
CHRNA1-202ENST00000348749 ODF2Q5BJF6 829 aa11.32□□□□□ -0.6
CHRNA1-202ENST00000348749 CACNA2D4Q7Z3S7 1137 aa11.32□□□□□ -0.6
CHRNA1-202ENST00000348749 USP38Q8NB14 1042 aa11.32□□□□□ -0.6
CHRNA1-202ENST00000348749 PARD3BQ8TEW8 1205 aa11.32□□□□□ -0.6
CHRNA1-202ENST00000348749 AGAP11Q8TF27 550 aa11.32□□□□□ -0.6
CHRNA1-202ENST00000348749 SDR42E1Q8WUS8 393 aa11.32□□□□□ -0.6
CHRNA1-202ENST00000348749 ANKS1AQ92625 1134 aa11.32□□□□□ -0.6
CHRNA1-202ENST00000348749 P2RX5Q93086 422 aa11.32□□□□□ -0.6
CHRNA1-202ENST00000348749 TLCD1Q96CP7 247 aa11.32□□□□□ -0.6
CHRNA1-202ENST00000348749 ANKRD27Q96NW4 1050 aa11.32□□□□□ -0.6
CHRNA1-202ENST00000348749 ZNF317Q96PQ6 595 aaPredicted RBP11.32□□□□□ -0.6
CHRNA1-202ENST00000348749 ATP8A2Q9NTI2 1148 aa11.32□□□□□ -0.6
CHRNA1-202ENST00000348749 CPSF2Q9P2I0 782 aaKnown RBP11.32□□□□□ -0.6
CHRNA1-202ENST00000348749 NOVA2Q9UNW9 492 aaKnown RBP11.32□□□□□ -0.6
CHRNA1-202ENST00000348749 SIK3Q9Y2K2 1263 aa11.32□□□□□ -0.6
CHRNA1-202ENST00000348749 KIAA1551Q9HCM1 1747 aa11.31□□□□□ -0.6
CHRNA1-202ENST00000348749 XIRP1Q702N8 1843 aaKnown RBP11.31□□□□□ -0.6
CHRNA1-202ENST00000348749 CCND1P24385 295 aa11.31□□□□□ -0.6
CHRNA1-202ENST00000348749 PEX19P40855 299 aa11.31□□□□□ -0.6
CHRNA1-202ENST00000348749 MTIF2P46199 727 aaKnown RBP11.31□□□□□ -0.6
CHRNA1-202ENST00000348749 CCNG1P51959 295 aa11.31□□□□□ -0.6
CHRNA1-202ENST00000348749 ERVK-9P63128 1117 aa11.31□□□□□ -0.6
CHRNA1-202ENST00000348749 CHRNDQ07001 517 aa11.31□□□□□ -0.6
CHRNA1-202ENST00000348749 HLTFQ14527 1009 aaKnown RBP eCLIP11.31□□□□□ -0.6
CHRNA1-202ENST00000348749 TRADDQ15628 312 aa11.31□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms