RNA–Protein interactions for RNA: ENST00000347691.9

TRAPPC6B-202, Transcript of trafficking protein particle complex 6B, humanhuman

TSL 1 (best) BASIC

Gene TRAPPC6B, Length 3,229 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC6B-202ENST00000347691 SALL4Q9UJQ4 1053 aa11.13□□□□□ -0.63
TRAPPC6B-202ENST00000347691 TRAF5O00463 557 aa11.12□□□□□ -0.63
TRAPPC6B-202ENST00000347691 LDHBP07195 334 aaKnown RBP11.12□□□□□ -0.63
TRAPPC6B-202ENST00000347691 PPP4CP60510 307 aa11.12□□□□□ -0.63
TRAPPC6B-202ENST00000347691 TMEM119Q4V9L6 283 aa11.12□□□□□ -0.63
TRAPPC6B-202ENST00000347691 KCTD16Q68DU8 428 aa11.12□□□□□ -0.63
TRAPPC6B-202ENST00000347691 PPP1R3FQ6ZSY5 799 aaPredicted RBP11.12□□□□□ -0.63
TRAPPC6B-202ENST00000347691 ANKRD13CQ8N6S4 541 aa11.12□□□□□ -0.63
TRAPPC6B-202ENST00000347691 SNX29Q8TEQ0 813 aa11.12□□□□□ -0.63
TRAPPC6B-202ENST00000347691 LMBR1Q8WVP7 490 aa11.12□□□□□ -0.63
TRAPPC6B-202ENST00000347691 CASKIN2Q8WXE0 1202 aa11.12□□□□□ -0.63
TRAPPC6B-202ENST00000347691 P3H4Q92791 437 aa11.12□□□□□ -0.63
TRAPPC6B-202ENST00000347691 LSM14BQ9BX40 385 aaKnown RBP11.12□□□□□ -0.63
TRAPPC6B-202ENST00000347691 NT5C3AQ9H0P0 336 aa11.12□□□□□ -0.63
TRAPPC6B-202ENST00000347691 TMBIM4Q9HC24 238 aa11.12□□□□□ -0.63
TRAPPC6B-202ENST00000347691 EHD2Q9NZN4 543 aa11.12□□□□□ -0.63
TRAPPC6B-202ENST00000347691 AIPL1Q9NZN9 384 aa11.12□□□□□ -0.63
TRAPPC6B-202ENST00000347691 USP17L3A6NCW0 530 aa11.12□□□□□ -0.63
TRAPPC6B-202ENST00000347691 USP17L4A6NCW7 530 aa11.12□□□□□ -0.63
TRAPPC6B-202ENST00000347691 CCDC188H7C350 402 aa11.12□□□□□ -0.63
TRAPPC6B-202ENST00000347691 MYBP10242 640 aa11.12□□□□□ -0.63
TRAPPC6B-202ENST00000347691 KLHL30Q0D2K2 578 aa11.12□□□□□ -0.63
TRAPPC6B-202ENST00000347691 TTC19Q6DKK2 380 aaPredicted RBP11.12□□□□□ -0.63
TRAPPC6B-202ENST00000347691 DYMQ7RTS9 669 aa11.12□□□□□ -0.63
TRAPPC6B-202ENST00000347691 USP17L1Q7RTZ2 530 aa11.12□□□□□ -0.63
TRAPPC6B-202ENST00000347691 TAX1BP1Q86VP1 789 aa11.12□□□□□ -0.63
TRAPPC6B-202ENST00000347691 CCDC50Q8IVM0 306 aa11.12□□□□□ -0.63
TRAPPC6B-202ENST00000347691 SH2D3CQ8N5H7 860 aa11.12□□□□□ -0.63
TRAPPC6B-202ENST00000347691 DDX12PQ92771 950 aa11.12□□□□□ -0.63
TRAPPC6B-202ENST00000347691 MS4A14Q96JA4 679 aa11.12□□□□□ -0.63
TRAPPC6B-202ENST00000347691 PNMA5Q96PV4 448 aa11.12□□□□□ -0.63
TRAPPC6B-202ENST00000347691 CCT8L2Q96SF2 557 aa11.12□□□□□ -0.63
TRAPPC6B-202ENST00000347691 HINFPQ9BQA5 517 aa11.12□□□□□ -0.63
TRAPPC6B-202ENST00000347691 SMARCAL1Q9NZC9 954 aa11.12□□□□□ -0.63
TRAPPC6B-202ENST00000347691 PLAAQ9Y263 795 aa11.12□□□□□ -0.63
TRAPPC6B-202ENST00000347691 UTP18Q9Y5J1 556 aaKnown RBP eCLIP11.12□□□□□ -0.63
TRAPPC6B-202ENST00000347691 RDXP35241 583 aaKnown RBP11.11□□□□□ -0.63
TRAPPC6B-202ENST00000347691 FNTAP49354 379 aa11.11□□□□□ -0.63
TRAPPC6B-202ENST00000347691 EVX2Q03828 476 aa11.11□□□□□ -0.63
TRAPPC6B-202ENST00000347691 KCNMA1Q12791 1236 aa11.11□□□□□ -0.63
TRAPPC6B-202ENST00000347691 ITGB3BPQ13352 177 aaPredicted RBP11.11□□□□□ -0.63
TRAPPC6B-202ENST00000347691 KIAA0753Q2KHM9 967 aa11.11□□□□□ -0.63
TRAPPC6B-202ENST00000347691 SLC35G1Q2M3R5 365 aa11.11□□□□□ -0.63
TRAPPC6B-202ENST00000347691 FAM26FQ5R3K3 315 aa11.11□□□□□ -0.63
TRAPPC6B-202ENST00000347691 CEP85LQ5SZL2 805 aa11.11□□□□□ -0.63
TRAPPC6B-202ENST00000347691 AGBL2Q5U5Z8 902 aa11.11□□□□□ -0.63
TRAPPC6B-202ENST00000347691 PPP1R18Q6NYC8 613 aa11.11□□□□□ -0.63
TRAPPC6B-202ENST00000347691 CCDC65Q8IXS2 484 aa11.11□□□□□ -0.63
TRAPPC6B-202ENST00000347691 MYCBPAPQ8TBZ2 947 aa11.11□□□□□ -0.63
TRAPPC6B-202ENST00000347691 NLRC4Q9NPP4 1024 aa11.11□□□□□ -0.63
TRAPPC6B-202ENST00000347691 TMEM59LQ9UK28 342 aa11.11□□□□□ -0.63
TRAPPC6B-202ENST00000347691 ADCY7P51828 1080 aa11.11□□□□□ -0.63
TRAPPC6B-202ENST00000347691 GUCY2FP51841 1108 aa11.11□□□□□ -0.63
TRAPPC6B-202ENST00000347691 POLR2FP61218 127 aaKnown RBP11.11□□□□□ -0.63
TRAPPC6B-202ENST00000347691 HLTFQ14527 1009 aaKnown RBP eCLIP11.11□□□□□ -0.63
TRAPPC6B-202ENST00000347691 ZCWPW2Q504Y3 356 aa11.11□□□□□ -0.63
TRAPPC6B-202ENST00000347691 FBXW10Q5XX13 1052 aa11.11□□□□□ -0.63
TRAPPC6B-202ENST00000347691 CCDC121Q6ZUS5 278 aa11.11□□□□□ -0.63
TRAPPC6B-202ENST00000347691 DHX30Q7L2E3 1194 aaKnown RBP eCLIP11.11□□□□□ -0.63
TRAPPC6B-202ENST00000347691 ACTRT1Q8TDG2 376 aa11.11□□□□□ -0.63
TRAPPC6B-202ENST00000347691 PIK3R5Q8WYR1 880 aa11.11□□□□□ -0.63
TRAPPC6B-202ENST00000347691 TBC1D5Q92609 795 aa11.11□□□□□ -0.63
TRAPPC6B-202ENST00000347691 HPS3Q969F9 1004 aa11.11□□□□□ -0.63
TRAPPC6B-202ENST00000347691 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP11.11□□□□□ -0.63
TRAPPC6B-202ENST00000347691 VCPKMTQ9H867 229 aa11.11□□□□□ -0.63
TRAPPC6B-202ENST00000347691 ROBO1Q9Y6N7 1651 aa11.11□□□□□ -0.63
TRAPPC6B-202ENST00000347691 KIF13BQ9NQT8 1826 aa11.11□□□□□ -0.63
TRAPPC6B-202ENST00000347691 FAM153BP0C7A2 387 aa11.11□□□□□ -0.63
TRAPPC6B-202ENST00000347691 RASA1P20936 1047 aa11.11□□□□□ -0.63
TRAPPC6B-202ENST00000347691 SMTNP53814 917 aa11.11□□□□□ -0.63
TRAPPC6B-202ENST00000347691 RAPGEF1Q13905 1077 aa11.11□□□□□ -0.63
TRAPPC6B-202ENST00000347691 FAM153CQ494X1 144 aa11.11□□□□□ -0.63
TRAPPC6B-202ENST00000347691 VPS36Q86VN1 386 aa11.11□□□□□ -0.63
TRAPPC6B-202ENST00000347691 NEDD1Q8NHV4 660 aa11.11□□□□□ -0.63
TRAPPC6B-202ENST00000347691 DYNLL2Q96FJ2 89 aa11.11□□□□□ -0.63
TRAPPC6B-202ENST00000347691 FAM153AQ9UHL3 310 aa11.11□□□□□ -0.63
TRAPPC6B-202ENST00000347691 COL4A1P02462 1669 aa11.1□□□□□ -0.63
TRAPPC6B-202ENST00000347691 CHUKO15111 745 aa11.1□□□□□ -0.63
TRAPPC6B-202ENST00000347691 FTCDO95954 541 aa11.1□□□□□ -0.63
TRAPPC6B-202ENST00000347691 KLRC1P26715 233 aa11.1□□□□□ -0.63
TRAPPC6B-202ENST00000347691 USP11P51784 963 aa11.1□□□□□ -0.63
TRAPPC6B-202ENST00000347691 GSCP56915 257 aaPredicted RBP11.1□□□□□ -0.63
TRAPPC6B-202ENST00000347691 GUCY1A3Q02108 690 aa11.1□□□□□ -0.63
TRAPPC6B-202ENST00000347691 ACTN3Q08043 901 aaPredicted RBP11.1□□□□□ -0.63
TRAPPC6B-202ENST00000347691 COASYQ13057 564 aa11.1□□□□□ -0.63
TRAPPC6B-202ENST00000347691 RNF187Q5TA31 235 aaPredicted RBP11.1□□□□□ -0.63
TRAPPC6B-202ENST00000347691 TRIM59Q8IWR1 403 aa11.1□□□□□ -0.63
TRAPPC6B-202ENST00000347691 CELF1Q92879 486 aaKnown RBP11.1□□□□□ -0.63
TRAPPC6B-202ENST00000347691 NLRP3Q96P20 1036 aa11.1□□□□□ -0.63
TRAPPC6B-202ENST00000347691 RABEP2Q9H5N1 569 aa11.1□□□□□ -0.63
TRAPPC6B-202ENST00000347691 E7EVH7 732 aa11.1□□□□□ -0.63
TRAPPC6B-202ENST00000347691 PGRMC1O00264 195 aaKnown RBP11.1□□□□□ -0.63
TRAPPC6B-202ENST00000347691 RAD51CO43502 376 aa11.1□□□□□ -0.63
TRAPPC6B-202ENST00000347691 GCFC2P16383 781 aaKnown RBP11.1□□□□□ -0.63
TRAPPC6B-202ENST00000347691 PLCG2P16885 1265 aa11.1□□□□□ -0.63
TRAPPC6B-202ENST00000347691 MAP2K2P36507 400 aa11.1□□□□□ -0.63
TRAPPC6B-202ENST00000347691 MRPS25P82663 173 aaKnown RBP11.1□□□□□ -0.63
TRAPPC6B-202ENST00000347691 SPDYCQ5MJ68 293 aa11.1□□□□□ -0.63
TRAPPC6B-202ENST00000347691 SYCE1Q8N0S2 351 aa11.1□□□□□ -0.63
TRAPPC6B-202ENST00000347691 CCDC26Q8TAB7 109 aa11.1□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms