RNA–Protein interactions for RNA: ENST00000346141.10

TUBD1-203, Transcript of tubulin delta 1, humanhuman

TSL 2 BASIC

Gene TUBD1, Length 1,490 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBD1-203ENST00000346141 NEDD9Q14511 834 aa13.69□□□□□ -0.22
TUBD1-203ENST00000346141 KIAA0753Q2KHM9 967 aa13.69□□□□□ -0.22
TUBD1-203ENST00000346141 PCNX4Q63HM2 1172 aa13.69□□□□□ -0.22
TUBD1-203ENST00000346141 APOA5Q6Q788 366 aa13.69□□□□□ -0.22
TUBD1-203ENST00000346141 DHX32Q7L7V1 743 aaKnown RBP13.69□□□□□ -0.22
TUBD1-203ENST00000346141 DEFB128Q7Z7B8 93 aa13.69□□□□□ -0.22
TUBD1-203ENST00000346141 CMTR1Q8N1G2 835 aaKnown RBP13.69□□□□□ -0.22
TUBD1-203ENST00000346141 MAFAQ8NHW3 353 aaPredicted RBP13.69□□□□□ -0.22
TUBD1-203ENST00000346141 AFAP1L1Q8TED9 768 aa13.69□□□□□ -0.22
TUBD1-203ENST00000346141 CTAGE1Q96RT6 745 aa13.69□□□□□ -0.22
TUBD1-203ENST00000346141 ALG1Q9BT22 464 aa13.69□□□□□ -0.22
TUBD1-203ENST00000346141 PSTPIP2Q9H939 334 aa13.69□□□□□ -0.22
TUBD1-203ENST00000346141 RBM28Q9NW13 759 aaKnown RBP13.69□□□□□ -0.22
TUBD1-203ENST00000346141 HDAC6Q9UBN7 1215 aa13.69□□□□□ -0.22
TUBD1-203ENST00000346141 UNC80Q8N2C7 3258 aa13.69□□□□□ -0.22
TUBD1-203ENST00000346141 SPATA31C2B4DYI2 1134 aa13.68□□□□□ -0.22
TUBD1-203ENST00000346141 PARNO95453 639 aaKnown RBP13.68□□□□□ -0.22
TUBD1-203ENST00000346141 HMGB1P09429 215 aaKnown RBP13.68□□□□□ -0.22
TUBD1-203ENST00000346141 EXOSC10Q01780 885 aaKnown RBP13.68□□□□□ -0.22
TUBD1-203ENST00000346141 GRIN2CQ14957 1233 aa13.68□□□□□ -0.22
TUBD1-203ENST00000346141 METTL7BQ6UX53 244 aa13.68□□□□□ -0.22
TUBD1-203ENST00000346141 RAB11FIP4Q86YS3 637 aa13.68□□□□□ -0.22
TUBD1-203ENST00000346141 TEX2Q8IWB9 1127 aa13.68□□□□□ -0.22
TUBD1-203ENST00000346141 GPKOWQ92917 476 aaPredicted RBP eCLIP13.68□□□□□ -0.22
TUBD1-203ENST00000346141 NOP56O00567 594 aaKnown RBP13.67□□□□□ -0.22
TUBD1-203ENST00000346141 SORBS3O60504 671 aa13.67□□□□□ -0.22
TUBD1-203ENST00000346141 SELPP16109 830 aa13.67□□□□□ -0.22
TUBD1-203ENST00000346141 ATP2A2P16615 1042 aaKnown RBP13.67□□□□□ -0.22
TUBD1-203ENST00000346141 PTK7Q13308 1070 aa13.67□□□□□ -0.22
TUBD1-203ENST00000346141 NLRX1Q86UT6 975 aa13.67□□□□□ -0.22
TUBD1-203ENST00000346141 CCDC82Q8N4S0 544 aa13.67□□□□□ -0.22
TUBD1-203ENST00000346141 SENP7Q9BQF6 1050 aa13.67□□□□□ -0.22
TUBD1-203ENST00000346141 C16orf70Q9BSU1 422 aa13.67□□□□□ -0.22
TUBD1-203ENST00000346141 FTOQ9C0B1 505 aaKnown RBP eCLIP13.67□□□□□ -0.22
TUBD1-203ENST00000346141 RTEL1Q9NZ71 1219 aa13.67□□□□□ -0.22
TUBD1-203ENST00000346141 TANC1Q9C0D5 1861 aa13.67□□□□□ -0.22
TUBD1-203ENST00000346141 ZBTB43O43298 467 aa13.67□□□□□ -0.22
TUBD1-203ENST00000346141 BAIAP3O94812 1187 aa13.67□□□□□ -0.22
TUBD1-203ENST00000346141 RCAN1P53805 252 aa13.67□□□□□ -0.22
TUBD1-203ENST00000346141 SEMA3FQ13275 785 aa13.67□□□□□ -0.22
TUBD1-203ENST00000346141 ADCK5Q3MIX3 580 aa13.67□□□□□ -0.22
TUBD1-203ENST00000346141 LRRC8DQ7L1W4 858 aa13.67□□□□□ -0.22
TUBD1-203ENST00000346141 HEATR3Q7Z4Q2 680 aa13.67□□□□□ -0.22
TUBD1-203ENST00000346141 PHF6Q8IWS0 365 aaKnown RBP eCLIP13.67□□□□□ -0.22
TUBD1-203ENST00000346141 GIMAP8Q8ND71 665 aaPredicted RBP13.67□□□□□ -0.22
TUBD1-203ENST00000346141 DHX38Q92620 1227 aaKnown RBP13.67□□□□□ -0.22
TUBD1-203ENST00000346141 CDHR1Q96JP9 859 aa13.67□□□□□ -0.22
TUBD1-203ENST00000346141 USP26Q9BXU7 913 aa13.67□□□□□ -0.22
TUBD1-203ENST00000346141 SLC28A3Q9HAS3 691 aa13.67□□□□□ -0.22
TUBD1-203ENST00000346141 PCDHA11Q9Y5I1 949 aa13.67□□□□□ -0.22
TUBD1-203ENST00000346141 MYH7BA7E2Y1 1941 aa13.66□□□□□ -0.22
TUBD1-203ENST00000346141 EYSQ5T1H1 3165 aa13.66□□□□□ -0.22
TUBD1-203ENST00000346141 CNTNAP5Q8WYK1 1306 aa13.66□□□□□ -0.22
TUBD1-203ENST00000346141 hCG_1642624A0A1W2PR95 340 aa13.66□□□□□ -0.22
TUBD1-203ENST00000346141 SPDYE3A6NKU9 549 aa13.66□□□□□ -0.22
TUBD1-203ENST00000346141 H3BRB1 525 aa13.66□□□□□ -0.22
TUBD1-203ENST00000346141 hCG_1984214I3L0E3 225 aa13.66□□□□□ -0.22
TUBD1-203ENST00000346141 LGALS2P05162 132 aa13.66□□□□□ -0.22
TUBD1-203ENST00000346141 RTN1Q16799 776 aa13.66□□□□□ -0.22
TUBD1-203ENST00000346141 PPP1R18Q6NYC8 613 aa13.66□□□□□ -0.22
TUBD1-203ENST00000346141 CYFIP1Q7L576 1253 aa13.66□□□□□ -0.22
TUBD1-203ENST00000346141 EFCAB3Q8N7B9 438 aa13.66□□□□□ -0.22
TUBD1-203ENST00000346141 ZNF713Q8N859 430 aaPredicted RBP13.66□□□□□ -0.22
TUBD1-203ENST00000346141 PHOSPHO2Q8TCD6 241 aa13.66□□□□□ -0.22
TUBD1-203ENST00000346141 GPRASP2Q96D09 838 aa13.66□□□□□ -0.22
TUBD1-203ENST00000346141 TCEANC2Q96MN5 208 aa13.66□□□□□ -0.22
TUBD1-203ENST00000346141 SLC9A7Q96T83 725 aa13.66□□□□□ -0.22
TUBD1-203ENST00000346141 GAS2L1Q99501 681 aaPredicted RBP13.66□□□□□ -0.22
TUBD1-203ENST00000346141 NKX2-4Q9H2Z4 354 aa13.66□□□□□ -0.22
TUBD1-203ENST00000346141 TUT1Q9H6E5 874 aaKnown RBP13.66□□□□□ -0.22
TUBD1-203ENST00000346141 BRPF3Q9ULD4 1205 aa13.66□□□□□ -0.22
TUBD1-203ENST00000346141 MYO9BQ13459 2157 aa13.65□□□□□ -0.22
TUBD1-203ENST00000346141 SCN5AQ14524 2016 aa13.65□□□□□ -0.22
TUBD1-203ENST00000346141 CKBP12277 381 aa13.65□□□□□ -0.22
TUBD1-203ENST00000346141 FGD1P98174 961 aa13.65□□□□□ -0.22
TUBD1-203ENST00000346141 KCNB2Q92953 911 aa13.65□□□□□ -0.22
TUBD1-203ENST00000346141 GPR20Q99678 358 aa13.65□□□□□ -0.22
TUBD1-203ENST00000346141 OCEL1Q9H607 264 aa13.65□□□□□ -0.22
TUBD1-203ENST00000346141 EHMT1Q9H9B1 1298 aa13.65□□□□□ -0.22
TUBD1-203ENST00000346141 ZNF215Q9UL58 517 aaPredicted RBP13.65□□□□□ -0.22
TUBD1-203ENST00000346141 YBX2Q9Y2T7 364 aaKnown RBP13.65□□□□□ -0.22
TUBD1-203ENST00000346141 STK24Q9Y6E0 443 aa13.65□□□□□ -0.22
TUBD1-203ENST00000346141 PRUNE2Q8WUY3 3088 aa13.65□□□□□ -0.22
TUBD1-203ENST00000346141 CHD7Q9P2D1 2997 aa13.65□□□□□ -0.22
TUBD1-203ENST00000346141 KLF18A0A0U1RQI7 1052 aa13.64□□□□□ -0.23
TUBD1-203ENST00000346141 C17orf102A2RUQ5 167 aa13.64□□□□□ -0.23
TUBD1-203ENST00000346141 GOLGA8AA7E2F4 631 aa13.64□□□□□ -0.23
TUBD1-203ENST00000346141 GOLGA8BA8MQT2 603 aa13.64□□□□□ -0.23
TUBD1-203ENST00000346141 STK25O00506 426 aa13.64□□□□□ -0.23
TUBD1-203ENST00000346141 DLL1O00548 723 aa13.64□□□□□ -0.23
TUBD1-203ENST00000346141 REC8O95072 547 aa13.64□□□□□ -0.23
TUBD1-203ENST00000346141 CXCL10P02778 98 aa13.64□□□□□ -0.23
TUBD1-203ENST00000346141 HOXC8P31273 242 aa13.64□□□□□ -0.23
TUBD1-203ENST00000346141 HSPA4P34932 840 aa13.64□□□□□ -0.23
TUBD1-203ENST00000346141 RABGGTBP53611 331 aa13.64□□□□□ -0.23
TUBD1-203ENST00000346141 NAPAP54920 295 aa13.64□□□□□ -0.23
TUBD1-203ENST00000346141 FUT2Q10981 343 aa13.64□□□□□ -0.23
TUBD1-203ENST00000346141 UBE2SQ16763 222 aa13.64□□□□□ -0.23
TUBD1-203ENST00000346141 TRIM71Q2Q1W2 868 aaKnown RBP13.64□□□□□ -0.23
TUBD1-203ENST00000346141 PPP2R2DQ66LE6 453 aa13.64□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms