RNA–Protein interactions for RNA: ENST00000345734.7

ATG4A-202, Transcript of autophagy related 4A cysteine peptidase, humanhuman

TSL 1 (best) BASIC

Gene ATG4A, Length 2,129 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4A-202ENST00000345734 CLDN10P78369 228 aa10.39□□□□□ -0.75
ATG4A-202ENST00000345734 MAP3K10Q02779 954 aa10.39□□□□□ -0.75
ATG4A-202ENST00000345734 PTK7Q13308 1070 aa10.39□□□□□ -0.75
ATG4A-202ENST00000345734 CALCRLQ16602 461 aa10.39□□□□□ -0.75
ATG4A-202ENST00000345734 OXLD1Q5BKU9 147 aa10.39□□□□□ -0.75
ATG4A-202ENST00000345734 TJAP1Q5JTD0 557 aa10.39□□□□□ -0.75
ATG4A-202ENST00000345734 RRAGBQ5VZM2 374 aa10.39□□□□□ -0.75
ATG4A-202ENST00000345734 TRMT44Q8IYL2 757 aaKnown RBP10.39□□□□□ -0.75
ATG4A-202ENST00000345734 SMYD4Q8IYR2 804 aaPredicted RBP10.39□□□□□ -0.75
ATG4A-202ENST00000345734 TRIML1Q8N9V2 468 aa10.39□□□□□ -0.75
ATG4A-202ENST00000345734 MLKLQ8NB16 471 aa10.39□□□□□ -0.75
ATG4A-202ENST00000345734 RASSF8Q8NHQ8 419 aa10.39□□□□□ -0.75
ATG4A-202ENST00000345734 MED15Q96RN5 788 aa10.39□□□□□ -0.75
ATG4A-202ENST00000345734 P2RX7Q99572 595 aaKnown RBP10.39□□□□□ -0.75
ATG4A-202ENST00000345734 PYM1Q9BRP8 204 aaKnown RBP10.39□□□□□ -0.75
ATG4A-202ENST00000345734 AMNQ9BXJ7 453 aa10.39□□□□□ -0.75
ATG4A-202ENST00000345734 CCSER1Q9C0I3 900 aa10.39□□□□□ -0.75
ATG4A-202ENST00000345734 SYNPO2Q9UMS6 1093 aa10.39□□□□□ -0.75
ATG4A-202ENST00000345734 PHF20L1A8MW92 1017 aa10.39□□□□□ -0.75
ATG4A-202ENST00000345734 MEIS2O14770 477 aa10.39□□□□□ -0.75
ATG4A-202ENST00000345734 TPM4P67936 248 aa10.39□□□□□ -0.75
ATG4A-202ENST00000345734 ORC2Q13416 577 aaPredicted RBP10.39□□□□□ -0.75
ATG4A-202ENST00000345734 C4orf48Q5BLP8 95 aa10.39□□□□□ -0.75
ATG4A-202ENST00000345734 CABP7Q86V35 215 aa10.39□□□□□ -0.75
ATG4A-202ENST00000345734 FBXO11Q86XK2 927 aa10.39□□□□□ -0.75
ATG4A-202ENST00000345734 GJA10Q969M2 543 aa10.39□□□□□ -0.75
ATG4A-202ENST00000345734 XPO4Q9C0E2 1151 aaKnown RBP10.39□□□□□ -0.75
ATG4A-202ENST00000345734 FANCLQ9NW38 375 aa10.39□□□□□ -0.75
ATG4A-202ENST00000345734 IFNKQ9P0W0 207 aa10.39□□□□□ -0.75
ATG4A-202ENST00000345734 ZNF500O60304 480 aaPredicted RBP10.38□□□□□ -0.75
ATG4A-202ENST00000345734 PLCG1P19174 1290 aa10.38□□□□□ -0.75
ATG4A-202ENST00000345734 STAT2P52630 851 aa10.38□□□□□ -0.75
ATG4A-202ENST00000345734 FANCCQ00597 558 aa10.38□□□□□ -0.75
ATG4A-202ENST00000345734 HSP90AA4PQ58FG1 418 aa10.38□□□□□ -0.75
ATG4A-202ENST00000345734 PHLDB3Q6NSJ2 640 aa10.38□□□□□ -0.75
ATG4A-202ENST00000345734 C17orf53Q8N3J3 647 aaPredicted RBP10.38□□□□□ -0.75
ATG4A-202ENST00000345734 DPF2Q92785 391 aa10.38□□□□□ -0.75
ATG4A-202ENST00000345734 AK8Q96MA6 479 aa10.38□□□□□ -0.75
ATG4A-202ENST00000345734 GSDMAQ96QA5 445 aa10.38□□□□□ -0.75
ATG4A-202ENST00000345734 UIMC1Q96RL1 719 aa10.38□□□□□ -0.75
ATG4A-202ENST00000345734 MMTAG2Q9BU76 263 aaKnown RBP10.38□□□□□ -0.75
ATG4A-202ENST00000345734 VCPKMTQ9H867 229 aa10.38□□□□□ -0.75
ATG4A-202ENST00000345734 HACL1Q9UJ83 578 aa10.38□□□□□ -0.75
ATG4A-202ENST00000345734 POLR2AP24928 1970 aaKnown RBP10.38□□□□□ -0.75
ATG4A-202ENST00000345734 OPLAHO14841 1288 aa10.37□□□□□ -0.75
ATG4A-202ENST00000345734 KIF20AO95235 890 aa10.37□□□□□ -0.75
ATG4A-202ENST00000345734 RAB15P59190 212 aa10.37□□□□□ -0.75
ATG4A-202ENST00000345734 LRMPQ12912 555 aa10.37□□□□□ -0.75
ATG4A-202ENST00000345734 KIF4BQ2VIQ3 1234 aa10.37□□□□□ -0.75
ATG4A-202ENST00000345734 PPP4R3AQ6IN85 833 aa10.37□□□□□ -0.75
ATG4A-202ENST00000345734 KLHL10Q6JEL2 608 aa10.37□□□□□ -0.75
ATG4A-202ENST00000345734 IGSF22Q8N9C0 903 aa10.37□□□□□ -0.75
ATG4A-202ENST00000345734 ANO3Q9BYT9 981 aa10.37□□□□□ -0.75
ATG4A-202ENST00000345734 DDX25Q9UHL0 483 aaKnown RBP10.37□□□□□ -0.75
ATG4A-202ENST00000345734 PYCARDQ9ULZ3 195 aa10.37□□□□□ -0.75
ATG4A-202ENST00000345734 KIAA1024Q9UPX6 916 aa10.37□□□□□ -0.75
ATG4A-202ENST00000345734 DICER1Q9UPY3 1922 aaKnown RBP10.37□□□□□ -0.75
ATG4A-202ENST00000345734 ASNSP08243 561 aa10.37□□□□□ -0.75
ATG4A-202ENST00000345734 MMP14P50281 582 aa10.37□□□□□ -0.75
ATG4A-202ENST00000345734 DMTNQ08495 405 aa10.37□□□□□ -0.75
ATG4A-202ENST00000345734 TNFAIP1Q13829 316 aa10.37□□□□□ -0.75
ATG4A-202ENST00000345734 ARID5BQ14865 1188 aa10.37□□□□□ -0.75
ATG4A-202ENST00000345734 CCDC174Q6PII3 467 aa10.37□□□□□ -0.75
ATG4A-202ENST00000345734 HAS1Q92839 578 aa10.37□□□□□ -0.75
ATG4A-202ENST00000345734 KIFC2Q96AC6 838 aa10.37□□□□□ -0.75
ATG4A-202ENST00000345734 ZNF341Q9BYN7 854 aa10.37□□□□□ -0.75
ATG4A-202ENST00000345734 GLT8D2Q9H1C3 349 aa10.37□□□□□ -0.75
ATG4A-202ENST00000345734 DEFB129Q9H1M3 183 aa10.37□□□□□ -0.75
ATG4A-202ENST00000345734 FBXO28Q9NVF7 368 aa10.37□□□□□ -0.75
ATG4A-202ENST00000345734 DACH1Q9UI36 760 aa10.37□□□□□ -0.75
ATG4A-202ENST00000345734 NFE2L3Q9Y4A8 694 aa10.37□□□□□ -0.75
ATG4A-202ENST00000345734 SBF1O95248 1867 aa10.37□□□□□ -0.75
ATG4A-202ENST00000345734 COBLO75128 1261 aa10.36□□□□□ -0.75
ATG4A-202ENST00000345734 RPN1P04843 607 aaKnown RBP10.36□□□□□ -0.75
ATG4A-202ENST00000345734 TPM3P06753 285 aa10.36□□□□□ -0.75
ATG4A-202ENST00000345734 HOXA13P31271 388 aaPredicted RBP10.36□□□□□ -0.75
ATG4A-202ENST00000345734 STX17P56962 302 aa10.36□□□□□ -0.75
ATG4A-202ENST00000345734 DGKZQ13574 1117 aa10.36□□□□□ -0.75
ATG4A-202ENST00000345734 NBPF12Q5TAG4 269 aaPredicted RBP10.36□□□□□ -0.75
ATG4A-202ENST00000345734 PRAMEF18Q5VWM3 479 aa10.36□□□□□ -0.75
ATG4A-202ENST00000345734 TRAF7Q6Q0C0 670 aa10.36□□□□□ -0.75
ATG4A-202ENST00000345734 FILIP1Q7Z7B0 1213 aa10.36□□□□□ -0.75
ATG4A-202ENST00000345734 ENOX1Q8TC92 643 aaKnown RBP10.36□□□□□ -0.75
ATG4A-202ENST00000345734 KBTBD4Q9NVX7 518 aa10.36□□□□□ -0.75
ATG4A-202ENST00000345734 LRWD1Q9UFC0 647 aa10.36□□□□□ -0.75
ATG4A-202ENST00000345734 ELOAQ14241 798 aaKnown RBP10.36□□□□□ -0.75
ATG4A-202ENST00000345734 PTPN21Q16825 1174 aa10.36□□□□□ -0.75
ATG4A-202ENST00000345734 EML3Q32P44 896 aa10.36□□□□□ -0.75
ATG4A-202ENST00000345734 ARHGAP27Q6ZUM4 889 aa10.36□□□□□ -0.75
ATG4A-202ENST00000345734 TRPM4Q8TD43 1214 aa10.36□□□□□ -0.75
ATG4A-202ENST00000345734 CACTINQ8WUQ7 758 aaKnown RBP10.36□□□□□ -0.75
ATG4A-202ENST00000345734 SAMSN1Q9NSI8 373 aaKnown RBP10.36□□□□□ -0.75
ATG4A-202ENST00000345734 DOLKQ9UPQ8 538 aa10.36□□□□□ -0.75
ATG4A-202ENST00000345734 KLRC4O43908 158 aa10.35□□□□□ -0.75
ATG4A-202ENST00000345734 SERPINC1P01008 464 aa10.35□□□□□ -0.75
ATG4A-202ENST00000345734 ZNF18P17022 549 aa10.35□□□□□ -0.75
ATG4A-202ENST00000345734 ERCC5P28715 1186 aaPredicted RBP10.35□□□□□ -0.75
ATG4A-202ENST00000345734 UBASH3AP57075 661 aa10.35□□□□□ -0.75
ATG4A-202ENST00000345734 GRB10Q13322 594 aa10.35□□□□□ -0.75
ATG4A-202ENST00000345734 AP3B2Q13367 1082 aa10.35□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms