RNA–Protein interactions for RNA: ENST00000344722.5

SMC4-201, Transcript of structural maintenance of chromosomes 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMC4, Length 5,356 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-201ENST00000344722 ESYT3A0FGR9 886 aa19.55■□□□□ 0.72
SMC4-201ENST00000344722 K7ENM7 598 aa19.55■□□□□ 0.72
SMC4-201ENST00000344722 SGK1O00141 431 aa19.55■□□□□ 0.72
SMC4-201ENST00000344722 ACSL3O95573 720 aa19.55■□□□□ 0.72
SMC4-201ENST00000344722 RHOT2Q8IXI1 618 aa19.55■□□□□ 0.72
SMC4-201ENST00000344722 FAM186BQ8IYM0 893 aa19.55■□□□□ 0.72
SMC4-201ENST00000344722 PPIL4Q8WUA2 492 aaKnown RBP eCLIP19.55■□□□□ 0.726e-8■■■■□ 23.9
SMC4-201ENST00000344722 TRIM55Q9BYV6 548 aa19.55■□□□□ 0.72
SMC4-201ENST00000344722 ETNK1Q9HBU6 452 aa19.55■□□□□ 0.72
SMC4-201ENST00000344722 GCNT4Q9P109 453 aa19.55■□□□□ 0.72
SMC4-201ENST00000344722 IGSF1Q8N6C5 1336 aa19.55■□□□□ 0.72
SMC4-201ENST00000344722 A0A1B0GTH6 734 aa19.54■□□□□ 0.72
SMC4-201ENST00000344722 DDX39AO00148 427 aaKnown RBP19.54■□□□□ 0.72
SMC4-201ENST00000344722 GAP43P17677 238 aa19.54■□□□□ 0.72
SMC4-201ENST00000344722 RWDD2BP57060 319 aa19.54■□□□□ 0.72
SMC4-201ENST00000344722 MKRN3Q13064 507 aaKnown RBP19.54■□□□□ 0.72
SMC4-201ENST00000344722 PROSER3Q2NL68 480 aa19.54■□□□□ 0.72
SMC4-201ENST00000344722 SLC30A9Q6PML9 568 aa19.54■□□□□ 0.72
SMC4-201ENST00000344722 GRAMD1AQ96CP6 724 aa19.54■□□□□ 0.72
SMC4-201ENST00000344722 CALR3Q96L12 384 aaKnown RBP19.54■□□□□ 0.72
SMC4-201ENST00000344722 LRRC37BQ96QE4 947 aa19.54■□□□□ 0.72
SMC4-201ENST00000344722 CARD10Q9BWT7 1032 aa19.54■□□□□ 0.72
SMC4-201ENST00000344722 TTC36A6NLP5 189 aa19.54■□□□□ 0.72
SMC4-201ENST00000344722 MGEA5O60502 916 aa19.54■□□□□ 0.72
SMC4-201ENST00000344722 KRT81Q14533 505 aa19.54■□□□□ 0.72
SMC4-201ENST00000344722 PPP2R5DQ14738 602 aa19.54■□□□□ 0.72
SMC4-201ENST00000344722 PPP4R3CPQ6ZMV5 832 aa19.54■□□□□ 0.72
SMC4-201ENST00000344722 CDAN1Q8IWY9 1227 aa19.54■□□□□ 0.72
SMC4-201ENST00000344722 EFHD1Q9BUP0 239 aa19.54■□□□□ 0.72
SMC4-201ENST00000344722 ZSWIM5Q9P217 1185 aa19.54■□□□□ 0.72
SMC4-201ENST00000344722 SNX24Q9Y343 169 aa19.54■□□□□ 0.72
SMC4-201ENST00000344722 SYNGAP1Q96PV0 1343 aa19.54■□□□□ 0.72
SMC4-201ENST00000344722 LRRC53A6NM62 1247 aa19.54■□□□□ 0.72
SMC4-201ENST00000344722 SP4Q02446 784 aa19.54■□□□□ 0.72
SMC4-201ENST00000344722 RPS6KA2Q15349 733 aa19.54■□□□□ 0.72
SMC4-201ENST00000344722 MMEL1Q495T6 779 aa19.54■□□□□ 0.72
SMC4-201ENST00000344722 SLITRK6Q9H5Y7 841 aa19.54■□□□□ 0.72
SMC4-201ENST00000344722 ARHGEF10LQ9HCE6 1279 aa19.54■□□□□ 0.72
SMC4-201ENST00000344722 TTC4O95801 387 aa19.53■□□□□ 0.72
SMC4-201ENST00000344722 MX2P20592 715 aa19.53■□□□□ 0.72
SMC4-201ENST00000344722 PTPN12Q05209 780 aaKnown RBP19.53■□□□□ 0.72
SMC4-201ENST00000344722 LRRC1Q9BTT6 524 aa19.53■□□□□ 0.72
SMC4-201ENST00000344722 IRX2Q9BZI1 471 aaPredicted RBP19.53■□□□□ 0.72
SMC4-201ENST00000344722 XAB2Q9HCS7 855 aaKnown RBP19.53■□□□□ 0.72
SMC4-201ENST00000344722 ZNF219Q9P2Y4 722 aaPredicted RBP19.53■□□□□ 0.72
SMC4-201ENST00000344722 SNX12Q9UMY4 172 aa19.53■□□□□ 0.72
SMC4-201ENST00000344722 TBX22Q9Y458 520 aa19.53■□□□□ 0.72
SMC4-201ENST00000344722 ZMAT2Q96NC0 199 aaKnown RBP19.53■□□□□ 0.72
SMC4-201ENST00000344722 SERPINI1Q99574 410 aa19.53■□□□□ 0.72
SMC4-201ENST00000344722 ITIH6Q6UXX5 1313 aa19.53■□□□□ 0.72
SMC4-201ENST00000344722 MIF4GDA9UHW6 222 aaKnown RBP19.53■□□□□ 0.72
SMC4-201ENST00000344722 CDC25AP30304 524 aa19.53■□□□□ 0.72
SMC4-201ENST00000344722 ATG16L1Q676U5 607 aa19.53■□□□□ 0.72
SMC4-201ENST00000344722 KRT80Q6KB66 452 aa19.53■□□□□ 0.72
SMC4-201ENST00000344722 SHC4Q6S5L8 630 aa19.53■□□□□ 0.72
SMC4-201ENST00000344722 PIP4K2CQ8TBX8 421 aa19.53■□□□□ 0.72
SMC4-201ENST00000344722 DYDC2Q96IM9 177 aa19.53■□□□□ 0.72
SMC4-201ENST00000344722 CAPN11Q9UMQ6 739 aa19.53■□□□□ 0.72
SMC4-201ENST00000344722 LAMC1P11047 1609 aa19.53■□□□□ 0.72
SMC4-201ENST00000344722 PTK2Q05397 1052 aa19.53■□□□□ 0.72
SMC4-201ENST00000344722 USH1GQ495M9 461 aa19.53■□□□□ 0.72
SMC4-201ENST00000344722 TMCO4Q5TGY1 634 aa19.53■□□□□ 0.72
SMC4-201ENST00000344722 RASGRP4Q8TDF6 673 aa19.53■□□□□ 0.72
SMC4-201ENST00000344722 BUD13Q9BRD0 619 aaKnown RBP eCLIP19.53■□□□□ 0.722e-9■■■■■ 75.2
SMC4-201ENST00000344722 FUT8Q9BYC5 575 aa19.53■□□□□ 0.72
SMC4-201ENST00000344722 PLS3P13797 630 aa19.52■□□□□ 0.72
SMC4-201ENST00000344722 SEMA3FQ13275 785 aa19.52■□□□□ 0.72
SMC4-201ENST00000344722 PDZD8Q8NEN9 1154 aa19.52■□□□□ 0.72
SMC4-201ENST00000344722 CXorf38Q8TB03 319 aa19.52■□□□□ 0.72
SMC4-201ENST00000344722 TEKT1Q969V4 418 aa19.52■□□□□ 0.72
SMC4-201ENST00000344722 PUS3Q9BZE2 481 aaKnown RBP19.52■□□□□ 0.72
SMC4-201ENST00000344722 IPO5O00410 1097 aaKnown RBP19.52■□□□□ 0.72
SMC4-201ENST00000344722 NCK2O43639 380 aa19.52■□□□□ 0.72
SMC4-201ENST00000344722 GJB4Q9NTQ9 266 aa19.52■□□□□ 0.72
SMC4-201ENST00000344722 IRAK4Q9NWZ3 460 aa19.52■□□□□ 0.72
SMC4-201ENST00000344722 PDE8BO95263 885 aa19.52■□□□□ 0.72
SMC4-201ENST00000344722 LRRC31Q6UY01 552 aa19.52■□□□□ 0.72
SMC4-201ENST00000344722 TRIML2Q8N7C3 387 aa19.52■□□□□ 0.72
SMC4-201ENST00000344722 CEP70Q8NHQ1 597 aa19.52■□□□□ 0.72
SMC4-201ENST00000344722 IL17RAQ96F46 866 aa19.52■□□□□ 0.72
SMC4-201ENST00000344722 GPHNQ9NQX3 736 aaPredicted RBP19.52■□□□□ 0.72
SMC4-201ENST00000344722 PRCPP42785 496 aa19.52■□□□□ 0.71
SMC4-201ENST00000344722 GFPT1Q06210 699 aaPredicted RBP19.52■□□□□ 0.71
SMC4-201ENST00000344722 PPP1R2P3Q6NXS1 205 aa19.52■□□□□ 0.71
SMC4-201ENST00000344722 MORC4Q8TE76 937 aa19.52■□□□□ 0.71
SMC4-201ENST00000344722 SDCCAG3Q96C92 435 aa19.52■□□□□ 0.71
SMC4-201ENST00000344722 NUDCD1Q96RS6 583 aa19.52■□□□□ 0.71
SMC4-201ENST00000344722 HAUS8Q9BT25 410 aa19.52■□□□□ 0.71
SMC4-201ENST00000344722 EMILIN3Q9NT22 766 aa19.52■□□□□ 0.71
SMC4-201ENST00000344722 TRIM49BA6NDI0 452 aa19.52■□□□□ 0.71
SMC4-201ENST00000344722 GOLGA8HP0CJ92 632 aa19.52■□□□□ 0.71
SMC4-201ENST00000344722 KRT3P12035 628 aa19.52■□□□□ 0.71
SMC4-201ENST00000344722 PHKA1P46020 1223 aa19.52■□□□□ 0.71
SMC4-201ENST00000344722 CAV1Q03135 178 aa19.52■□□□□ 0.71
SMC4-201ENST00000344722 GRAMD1BQ3KR37 738 aa19.52■□□□□ 0.71
SMC4-201ENST00000344722 BSPRYQ5W0U4 402 aa19.52■□□□□ 0.71
SMC4-201ENST00000344722 CYTH2Q99418 400 aa19.52■□□□□ 0.71
SMC4-201ENST00000344722 LSP1P33241 339 aa19.51■□□□□ 0.71
SMC4-201ENST00000344722 EPM2AIP1Q7L775 607 aaPredicted RBP19.51■□□□□ 0.71
SMC4-201ENST00000344722 NT5C1BQ96P26 610 aa19.51■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms