RNA–Protein interactions for RNA: ENST00000344626.8

SMARCA4-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 1 (best) BASIC

Gene SMARCA4, Length 5,392 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-201ENST00000344626 RIC8AQ9NPQ8 531 aa17.97■□□□□ 0.47
SMARCA4-201ENST00000344626 NDUFA8P51970 172 aa17.97■□□□□ 0.47
SMARCA4-201ENST00000344626 MTRF1LQ9UGC7 380 aaKnown RBP17.97■□□□□ 0.47
SMARCA4-201ENST00000344626 HOXA10P31260 410 aaPredicted RBP17.97■□□□□ 0.47
SMARCA4-201ENST00000344626 CALCOCO2Q13137 446 aa17.97■□□□□ 0.47
SMARCA4-201ENST00000344626 FAM204AQ9H8W3 233 aa17.97■□□□□ 0.47
SMARCA4-201ENST00000344626 TXNDC16Q9P2K2 825 aa17.97■□□□□ 0.47
SMARCA4-201ENST00000344626 SURF1Q15526 300 aa17.97■□□□□ 0.47
SMARCA4-201ENST00000344626 KCNV1Q6PIU1 500 aa17.97■□□□□ 0.47
SMARCA4-201ENST00000344626 CEP128Q6ZU80 1094 aa17.97■□□□□ 0.47
SMARCA4-201ENST00000344626 MB21D1Q8N884 522 aa17.97■□□□□ 0.47
SMARCA4-201ENST00000344626 PPP1R14CQ8TAE6 165 aa17.97■□□□□ 0.47
SMARCA4-201ENST00000344626 CCDC51Q96ER9 411 aa17.97■□□□□ 0.47
SMARCA4-201ENST00000344626 FAM81BQ96LP2 452 aa17.97■□□□□ 0.47
SMARCA4-201ENST00000344626 LY9Q9HBG7 655 aa17.97■□□□□ 0.47
SMARCA4-201ENST00000344626 PIK3CAP42336 1068 aa17.96■□□□□ 0.47
SMARCA4-201ENST00000344626 MAGEA1P43355 309 aa17.96■□□□□ 0.47
SMARCA4-201ENST00000344626 HS1BP3Q53T59 392 aa17.96■□□□□ 0.47
SMARCA4-201ENST00000344626 FAM117BQ6P1L5 589 aa17.96■□□□□ 0.47
SMARCA4-201ENST00000344626 PRIMPOLQ96LW4 560 aa17.96■□□□□ 0.47
SMARCA4-201ENST00000344626 GLT1D1Q96MS3 346 aa17.96■□□□□ 0.47
SMARCA4-201ENST00000344626 PPP1R9BQ96SB3 815 aa17.96■□□□□ 0.47
SMARCA4-201ENST00000344626 FAM207AQ9NSI2 230 aaPredicted RBP17.96■□□□□ 0.47
SMARCA4-201ENST00000344626 WDR64B1ANS9 1081 aa17.96■□□□□ 0.47
SMARCA4-201ENST00000344626 DHTKD1Q96HY7 919 aaPredicted RBP17.96■□□□□ 0.47
SMARCA4-201ENST00000344626 FAM20AQ96MK3 541 aa17.96■□□□□ 0.47
SMARCA4-201ENST00000344626 SLITRK6Q9H5Y7 841 aa17.96■□□□□ 0.47
SMARCA4-201ENST00000344626 PARVGQ9HBI0 331 aa17.96■□□□□ 0.47
SMARCA4-201ENST00000344626 NYAP2Q9P242 653 aa17.96■□□□□ 0.47
SMARCA4-201ENST00000344626 FAM170AA1A519 330 aa17.96■□□□□ 0.47
SMARCA4-201ENST00000344626 MANSC4A6NHS7 340 aaPredicted RBP17.96■□□□□ 0.47
SMARCA4-201ENST00000344626 SLC25A27O95847 323 aa17.96■□□□□ 0.47
SMARCA4-201ENST00000344626 CAP2P40123 477 aa17.96■□□□□ 0.47
SMARCA4-201ENST00000344626 PSMD2Q13200 908 aa17.96■□□□□ 0.47
SMARCA4-201ENST00000344626 RRAGAQ7L523 313 aa17.96■□□□□ 0.47
SMARCA4-201ENST00000344626 CCDC26Q8TAB7 109 aa17.96■□□□□ 0.47
SMARCA4-201ENST00000344626 STMN4Q9H169 189 aaPredicted RBP17.96■□□□□ 0.47
SMARCA4-201ENST00000344626 GPRC5DQ9NZD1 345 aa17.96■□□□□ 0.47
SMARCA4-201ENST00000344626 SRPRBQ9Y5M8 271 aaKnown RBP17.96■□□□□ 0.47
SMARCA4-201ENST00000344626 FAM169AQ9Y6X4 670 aa17.96■□□□□ 0.47
SMARCA4-201ENST00000344626 MROH1Q8NDA8 1641 aa17.96■□□□□ 0.47
SMARCA4-201ENST00000344626 SFNP31947 248 aa17.96■□□□□ 0.47
SMARCA4-201ENST00000344626 PSMC2P35998 433 aaKnown RBP17.96■□□□□ 0.47
SMARCA4-201ENST00000344626 KCNJ6P48051 423 aa17.96■□□□□ 0.47
SMARCA4-201ENST00000344626 NEK9Q8TD19 979 aa17.96■□□□□ 0.47
SMARCA4-201ENST00000344626 CDCA5Q96FF9 252 aa17.96■□□□□ 0.47
SMARCA4-201ENST00000344626 BPIFB4P59827 614 aa17.95■□□□□ 0.46
SMARCA4-201ENST00000344626 ZNF75DP51815 510 aa17.95■□□□□ 0.46
SMARCA4-201ENST00000344626 SPATA1Q5VX52 437 aa17.95■□□□□ 0.46
SMARCA4-201ENST00000344626 GABPB2Q8TAK5 448 aaPredicted RBP17.95■□□□□ 0.46
SMARCA4-201ENST00000344626 K7ERI5 159 aa17.95■□□□□ 0.46
SMARCA4-201ENST00000344626 ERCC5P28715 1186 aaPredicted RBP17.95■□□□□ 0.46
SMARCA4-201ENST00000344626 ARHGAP4P98171 946 aa17.95■□□□□ 0.46
SMARCA4-201ENST00000344626 SND1Q7KZF4 910 aaKnown RBP eCLIP17.95■□□□□ 0.46
SMARCA4-201ENST00000344626 FBXO28Q9NVF7 368 aa17.95■□□□□ 0.46
SMARCA4-201ENST00000344626 ARHGEF28Q8N1W1 1705 aaKnown RBP17.95■□□□□ 0.46
SMARCA4-201ENST00000344626 E7EVH7 732 aa17.95■□□□□ 0.46
SMARCA4-201ENST00000344626 CHGBP05060 677 aa17.95■□□□□ 0.46
SMARCA4-201ENST00000344626 ZNF445P59923 1031 aa17.95■□□□□ 0.46
SMARCA4-201ENST00000344626 ELMSAN1Q6PJG2 1045 aa17.95■□□□□ 0.46
SMARCA4-201ENST00000344626 A0A1W2PRG0 241 aa17.94■□□□□ 0.46
SMARCA4-201ENST00000344626 SHTN1A0MZ66 631 aa17.94■□□□□ 0.46
SMARCA4-201ENST00000344626 PLA2G4BP0C869 781 aa17.94■□□□□ 0.46
SMARCA4-201ENST00000344626 PDE6CP51160 858 aa17.94■□□□□ 0.46
SMARCA4-201ENST00000344626 TFAMQ00059 246 aaKnown RBP17.94■□□□□ 0.46
SMARCA4-201ENST00000344626 SWSAP1Q6NVH7 229 aa17.94■□□□□ 0.46
SMARCA4-201ENST00000344626 STAMBPO95630 424 aa17.94■□□□□ 0.46
SMARCA4-201ENST00000344626 SLFN14P0C7P3 912 aa17.94■□□□□ 0.46
SMARCA4-201ENST00000344626 POLR2BP30876 1174 aaKnown RBP17.94■□□□□ 0.46
SMARCA4-201ENST00000344626 PRELPP51888 382 aa17.94■□□□□ 0.46
SMARCA4-201ENST00000344626 LACTBP83111 547 aaPredicted RBP17.94■□□□□ 0.46
SMARCA4-201ENST00000344626 SPECC1LQ69YQ0 1117 aa17.94■□□□□ 0.46
SMARCA4-201ENST00000344626 EEF2KMTQ96G04 330 aa17.94■□□□□ 0.46
SMARCA4-201ENST00000344626 CCDC66A2RUB6 948 aa17.94■□□□□ 0.46
SMARCA4-201ENST00000344626 CAPN9O14815 690 aa17.94■□□□□ 0.46
SMARCA4-201ENST00000344626 TM4SF1P30408 202 aa17.94■□□□□ 0.46
SMARCA4-201ENST00000344626 BIRC2Q13490 618 aa17.94■□□□□ 0.46
SMARCA4-201ENST00000344626 LINC00301Q8NCQ3 95 aa17.94■□□□□ 0.46
SMARCA4-201ENST00000344626 ACER1Q8TDN7 264 aa17.94■□□□□ 0.46
SMARCA4-201ENST00000344626 VPS33BQ9H267 617 aa17.94■□□□□ 0.46
SMARCA4-201ENST00000344626 FZD1Q9UP38 647 aa17.94■□□□□ 0.46
SMARCA4-201ENST00000344626 CTSHP09668 335 aa17.94■□□□□ 0.46
SMARCA4-201ENST00000344626 XRCC6P12956 609 aaKnown RBP eCLIP17.94■□□□□ 0.46
SMARCA4-201ENST00000344626 FERP16591 822 aa17.94■□□□□ 0.46
SMARCA4-201ENST00000344626 RFX5P48382 616 aaPredicted RBP17.94■□□□□ 0.46
SMARCA4-201ENST00000344626 SECISBP2LQ93073 1101 aaKnown RBP17.94■□□□□ 0.46
SMARCA4-201ENST00000344626 CAPZA3Q96KX2 299 aa17.94■□□□□ 0.46
SMARCA4-201ENST00000344626 NLRC4Q9NPP4 1024 aa17.94■□□□□ 0.46
SMARCA4-201ENST00000344626 GGPS1O95749 300 aa17.94■□□□□ 0.46
SMARCA4-201ENST00000344626 MCPH1Q8NEM0 835 aa17.94■□□□□ 0.46
SMARCA4-201ENST00000344626 ZKSCAN5Q9Y2L8 839 aa17.94■□□□□ 0.46
SMARCA4-201ENST00000344626 PPP2R3BQ9Y5P8 575 aa17.94■□□□□ 0.46
SMARCA4-201ENST00000344626 RGS2P41220 211 aa17.93■□□□□ 0.46
SMARCA4-201ENST00000344626 GCLCP48506 637 aaPredicted RBP17.93■□□□□ 0.46
SMARCA4-201ENST00000344626 ATN1P54259 1190 aaPredicted RBP17.93■□□□□ 0.46
SMARCA4-201ENST00000344626 TUBB2AQ13885 445 aa17.93■□□□□ 0.46
SMARCA4-201ENST00000344626 SLFN12LQ6IEE8 588 aa17.93■□□□□ 0.46
SMARCA4-201ENST00000344626 STAG2Q8N3U4 1231 aa17.93■□□□□ 0.46
SMARCA4-201ENST00000344626 TUBB2BQ9BVA1 445 aa17.93■□□□□ 0.46
SMARCA4-201ENST00000344626 CCDC94Q9BW85 323 aaPredicted RBP17.93■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms