RNA–Protein interactions for RNA: ENST00000344586.8

NKX2-3-201, Transcript of NK2 homeobox 3, humanhuman

APPRIS P1 TSL 2 BASIC

Gene NKX2-3, Length 2,097 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-3-201ENST00000344586 FAM163AQ96GL9 167 aaPredicted RBP25.49■■□□□ 1.67
NKX2-3-201ENST00000344586 EHD4Q9H223 541 aa25.49■■□□□ 1.67
NKX2-3-201ENST00000344586 GPCPD1Q9NPB8 672 aa25.49■■□□□ 1.67
NKX2-3-201ENST00000344586 EIF3HO15372 352 aaKnown RBP eCLIP25.49■■□□□ 1.67
NKX2-3-201ENST00000344586 HSF2BPO75031 334 aa25.49■■□□□ 1.67
NKX2-3-201ENST00000344586 UFL1O94874 794 aa25.49■■□□□ 1.67
NKX2-3-201ENST00000344586 GLI1P08151 1106 aa25.49■■□□□ 1.67
NKX2-3-201ENST00000344586 CLEC10AQ8IUN9 316 aa25.49■■□□□ 1.67
NKX2-3-201ENST00000344586 JMJD4Q9H9V9 463 aa25.49■■□□□ 1.67
NKX2-3-201ENST00000344586 HYIQ5T013 277 aa25.48■■□□□ 1.67
NKX2-3-201ENST00000344586 TRIM59Q8IWR1 403 aa25.48■■□□□ 1.67
NKX2-3-201ENST00000344586 PCDHA2Q9Y5H9 948 aa25.48■■□□□ 1.67
NKX2-3-201ENST00000344586 BTAF1O14981 1849 aa25.48■■□□□ 1.67
NKX2-3-201ENST00000344586 IGKV6D-41A0A0C4DH26 115 aa25.48■■□□□ 1.67
NKX2-3-201ENST00000344586 FTCDO95954 541 aa25.48■■□□□ 1.67
NKX2-3-201ENST00000344586 AKR1B1P15121 316 aa25.48■■□□□ 1.67
NKX2-3-201ENST00000344586 MARSP56192 900 aaKnown RBP25.48■■□□□ 1.67
NKX2-3-201ENST00000344586 EIF6P56537 245 aaKnown RBP25.48■■□□□ 1.67
NKX2-3-201ENST00000344586 GNGT1P63211 74 aa25.48■■□□□ 1.67
NKX2-3-201ENST00000344586 MFSD14BQ5SR56 506 aa25.48■■□□□ 1.67
NKX2-3-201ENST00000344586 IFT20Q8IY31 132 aa25.48■■□□□ 1.67
NKX2-3-201ENST00000344586 ZIM3Q96PE6 472 aa25.48■■□□□ 1.67
NKX2-3-201ENST00000344586 RUFY1Q96T51 708 aa25.48■■□□□ 1.67
NKX2-3-201ENST00000344586 TBC1D7Q9P0N9 293 aa25.48■■□□□ 1.67
NKX2-3-201ENST00000344586 PCDHGC5Q9Y5F6 944 aa25.48■■□□□ 1.67
NKX2-3-201ENST00000344586 PNMA6FA0A0J9YX94 578 aa25.47■■□□□ 1.67
NKX2-3-201ENST00000344586 KLRC1P26715 233 aa25.47■■□□□ 1.67
NKX2-3-201ENST00000344586 CCT5P48643 541 aa25.47■■□□□ 1.67
NKX2-3-201ENST00000344586 CARSP49589 748 aaKnown RBP25.47■■□□□ 1.67
NKX2-3-201ENST00000344586 SLC18A3Q16572 532 aa25.47■■□□□ 1.67
NKX2-3-201ENST00000344586 SKIDA1Q1XH10 827 aa25.47■■□□□ 1.67
NKX2-3-201ENST00000344586 GABPAQ06546 454 aa25.46■■□□□ 1.67
NKX2-3-201ENST00000344586 PACS2Q86VP3 889 aa25.46■■□□□ 1.67
NKX2-3-201ENST00000344586 NELFCDQ8IXH7 590 aa25.46■■□□□ 1.67
NKX2-3-201ENST00000344586 ADGRF4Q8IZF3 695 aa25.46■■□□□ 1.67
NKX2-3-201ENST00000344586 PPM1EQ8WY54 764 aa25.46■■□□□ 1.67
NKX2-3-201ENST00000344586 TBC1D5Q92609 795 aa25.46■■□□□ 1.67
NKX2-3-201ENST00000344586 LUC7LQ9NQ29 371 aaKnown RBP25.46■■□□□ 1.67
NKX2-3-201ENST00000344586 ATAD5Q96QE3 1844 aa25.46■■□□□ 1.67
NKX2-3-201ENST00000344586 ZSCAN5CA6NGD5 496 aaPredicted RBP25.46■■□□□ 1.67
NKX2-3-201ENST00000344586 HEXIM1O94992 359 aaKnown RBP25.46■■□□□ 1.67
NKX2-3-201ENST00000344586 GNA14O95837 355 aa25.46■■□□□ 1.67
NKX2-3-201ENST00000344586 SKOR1P84550 965 aa25.46■■□□□ 1.67
NKX2-3-201ENST00000344586 ZNF543Q08ER8 600 aa25.46■■□□□ 1.67
NKX2-3-201ENST00000344586 MEI1Q5TIA1 1274 aa25.46■■□□□ 1.67
NKX2-3-201ENST00000344586 DPP8Q6V1X1 898 aaPredicted RBP25.46■■□□□ 1.67
NKX2-3-201ENST00000344586 EFCAB13Q8IY85 973 aa25.46■■□□□ 1.67
NKX2-3-201ENST00000344586 CNBD1Q8NA66 436 aa25.46■■□□□ 1.67
NKX2-3-201ENST00000344586 INPP4AQ96PE3 977 aaPredicted RBP25.46■■□□□ 1.67
NKX2-3-201ENST00000344586 KANSL2Q9H9L4 492 aa25.46■■□□□ 1.67
NKX2-3-201ENST00000344586 CCNL1Q9UK58 526 aaPredicted RBP25.46■■□□□ 1.67
NKX2-3-201ENST00000344586 UTP18Q9Y5J1 556 aaKnown RBP eCLIP25.46■■□□□ 1.67
NKX2-3-201ENST00000344586 A0A087X0T9 212 aa25.45■■□□□ 1.66
NKX2-3-201ENST00000344586 GRID2IPA4D2P6 1211 aa25.45■■□□□ 1.66
NKX2-3-201ENST00000344586 SSBP05455 408 aaKnown RBP eCLIP25.45■■□□□ 1.66
NKX2-3-201ENST00000344586 FAM153BP0C7A2 387 aa25.45■■□□□ 1.66
NKX2-3-201ENST00000344586 FAM228BP0C875 321 aa25.45■■□□□ 1.66
NKX2-3-201ENST00000344586 DNA2P51530 1060 aa25.45■■□□□ 1.66
NKX2-3-201ENST00000344586 FAM153CQ494X1 144 aa25.45■■□□□ 1.66
NKX2-3-201ENST00000344586 ZC3H3Q8IXZ2 948 aaKnown RBP25.45■■□□□ 1.66
NKX2-3-201ENST00000344586 GANQ9H2C0 597 aa25.45■■□□□ 1.66
NKX2-3-201ENST00000344586 KCTD10Q9H3F6 313 aa25.45■■□□□ 1.66
NKX2-3-201ENST00000344586 FAM153AQ9UHL3 310 aa25.45■■□□□ 1.66
NKX2-3-201ENST00000344586 NFU1Q9UMS0 254 aa25.45■■□□□ 1.66
NKX2-3-201ENST00000344586 KDM3AQ9Y4C1 1321 aa25.45■■□□□ 1.66
NKX2-3-201ENST00000344586 ARFGEF1Q9Y6D6 1849 aa25.45■■□□□ 1.66
NKX2-3-201ENST00000344586 NPHP3-ACAD11A0A0J9YXS1 232 aa25.44■■□□□ 1.66
NKX2-3-201ENST00000344586 ESYT3A0FGR9 886 aa25.44■■□□□ 1.66
NKX2-3-201ENST00000344586 E9PMD0 336 aa25.44■■□□□ 1.66
NKX2-3-201ENST00000344586 RAPGEF1Q13905 1077 aa25.44■■□□□ 1.66
NKX2-3-201ENST00000344586 TTC31Q49AM3 519 aaPredicted RBP25.44■■□□□ 1.66
NKX2-3-201ENST00000344586 SLF2Q8IX21 1173 aa25.44■■□□□ 1.66
NKX2-3-201ENST00000344586 SCFD1Q8WVM8 642 aa25.44■■□□□ 1.66
NKX2-3-201ENST00000344586 CUL5Q93034 780 aa25.44■■□□□ 1.66
NKX2-3-201ENST00000344586 PACSIN1Q9BY11 444 aa25.44■■□□□ 1.66
NKX2-3-201ENST00000344586 ATP2B4P23634 1241 aa25.44■■□□□ 1.66
NKX2-3-201ENST00000344586 NOP2P46087 812 aaKnown RBP25.44■■□□□ 1.66
NKX2-3-201ENST00000344586 GUCY2DQ02846 1103 aa25.44■■□□□ 1.66
NKX2-3-201ENST00000344586 PAK2Q13177 524 aa25.44■■□□□ 1.66
NKX2-3-201ENST00000344586 SF3B2Q13435 895 aaKnown RBP25.44■■□□□ 1.66
NKX2-3-201ENST00000344586 TTC19Q6DKK2 380 aaPredicted RBP25.44■■□□□ 1.66
NKX2-3-201ENST00000344586 CCDC65Q8IXS2 484 aa25.44■■□□□ 1.66
NKX2-3-201ENST00000344586 BCAS4Q8TDM0 211 aa25.44■■□□□ 1.66
NKX2-3-201ENST00000344586 NT5C3AQ9H0P0 336 aa25.44■■□□□ 1.66
NKX2-3-201ENST00000344586 EPB41L5Q9HCM4 733 aa25.44■■□□□ 1.66
NKX2-3-201ENST00000344586 AIPL1Q9NZN9 384 aa25.44■■□□□ 1.66
NKX2-3-201ENST00000344586 GGA1Q9UJY5 639 aa25.44■■□□□ 1.66
NKX2-3-201ENST00000344586 PCDHA12Q9UN75 941 aa25.44■■□□□ 1.66
NKX2-3-201ENST00000344586 PACSIN2Q9UNF0 486 aaPredicted RBP25.44■■□□□ 1.66
NKX2-3-201ENST00000344586 MYH7BA7E2Y1 1941 aa25.44■■□□□ 1.66
NKX2-3-201ENST00000344586 GCFC2P16383 781 aaKnown RBP25.43■■□□□ 1.66
NKX2-3-201ENST00000344586 CACNB1Q02641 598 aaPredicted RBP25.43■■□□□ 1.66
NKX2-3-201ENST00000344586 TTBK2Q6IQ55 1244 aa25.43■■□□□ 1.66
NKX2-3-201ENST00000344586 FAM133AQ8N9E0 248 aa25.43■■□□□ 1.66
NKX2-3-201ENST00000344586 CCDC43Q96MW1 224 aaKnown RBP25.43■■□□□ 1.66
NKX2-3-201ENST00000344586 BMP2KQ9NSY1 1161 aaPredicted RBP25.43■■□□□ 1.66
NKX2-3-201ENST00000344586 DAGLAQ9Y4D2 1042 aa25.43■■□□□ 1.66
NKX2-3-201ENST00000344586 PLA2G4BP0C869 781 aa25.43■■□□□ 1.66
NKX2-3-201ENST00000344586 ARID5AQ03989 594 aa25.43■■□□□ 1.66
NKX2-3-201ENST00000344586 PICALMQ13492 652 aa25.43■■□□□ 1.66
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms