RNA–Protein interactions for RNA: ENST00000341472.9

SYNE2-201, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 1 (best) BASIC

Gene SYNE2, Length 1,132 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-201ENST00000341472 RPS6KB1P23443 525 aa23.11■■□□□ 1.29
SYNE2-201ENST00000341472 METAP2P50579 478 aaKnown RBP eCLIP23.11■■□□□ 1.29
SYNE2-201ENST00000341472 ZNF200P98182 395 aaPredicted RBP23.11■■□□□ 1.29
SYNE2-201ENST00000341472 PTK7Q13308 1070 aa23.11■■□□□ 1.29
SYNE2-201ENST00000341472 PPP1R18Q6NYC8 613 aa23.11■■□□□ 1.29
SYNE2-201ENST00000341472 MYLIPQ8WY64 445 aa23.11■■□□□ 1.29
SYNE2-201ENST00000341472 DHX38Q92620 1227 aaKnown RBP23.11■■□□□ 1.29
SYNE2-201ENST00000341472 GPR20Q99678 358 aa23.11■■□□□ 1.29
SYNE2-201ENST00000341472 RIC8AQ9NPQ8 531 aa23.11■■□□□ 1.29
SYNE2-201ENST00000341472 PPP4R2Q9NY27 417 aa23.11■■□□□ 1.29
SYNE2-201ENST00000341472 SMCO2A6NFE2 343 aa23.1■■□□□ 1.29
SYNE2-201ENST00000341472 EPB41L2O43491 1005 aaKnown RBP23.1■■□□□ 1.29
SYNE2-201ENST00000341472 FOSP01100 380 aaPredicted RBP23.1■■□□□ 1.29
SYNE2-201ENST00000341472 ITGB5P18084 799 aa23.1■■□□□ 1.29
SYNE2-201ENST00000341472 GRIN2CQ14957 1233 aa23.1■■□□□ 1.29
SYNE2-201ENST00000341472 TYW1BQ6NUM6 668 aa23.1■■□□□ 1.29
SYNE2-201ENST00000341472 FBXL16Q8N461 479 aa23.1■■□□□ 1.29
SYNE2-201ENST00000341472 GLT8D2Q9H1C3 349 aa23.1■■□□□ 1.29
SYNE2-201ENST00000341472 BARHL2Q9NY43 387 aa23.1■■□□□ 1.29
SYNE2-201ENST00000341472 UBIAD1Q9Y5Z9 338 aa23.1■■□□□ 1.29
SYNE2-201ENST00000341472 MYH6P13533 1939 aa23.1■■□□□ 1.29
SYNE2-201ENST00000341472 hCG_1984214I3L0E3 225 aa23.09■■□□□ 1.29
SYNE2-201ENST00000341472 STXBP3O00186 592 aa23.09■■□□□ 1.29
SYNE2-201ENST00000341472 MAFGO15525 162 aa23.09■■□□□ 1.29
SYNE2-201ENST00000341472 ATP9AO75110 1047 aa23.09■■□□□ 1.29
SYNE2-201ENST00000341472 PARNO95453 639 aaKnown RBP23.09■■□□□ 1.29
SYNE2-201ENST00000341472 CKBP12277 381 aa23.09■■□□□ 1.29
SYNE2-201ENST00000341472 ADCY7P51828 1080 aa23.09■■□□□ 1.29
SYNE2-201ENST00000341472 SP4Q02446 784 aa23.09■■□□□ 1.29
SYNE2-201ENST00000341472 UTP14CQ5TAP6 766 aaKnown RBP23.09■■□□□ 1.29
SYNE2-201ENST00000341472 LRRC8DQ7L1W4 858 aa23.09■■□□□ 1.29
SYNE2-201ENST00000341472 ZNF713Q8N859 430 aaPredicted RBP23.09■■□□□ 1.29
SYNE2-201ENST00000341472 JADE2Q9NQC1 790 aa23.09■■□□□ 1.29
SYNE2-201ENST00000341472 C17orf102A2RUQ5 167 aa23.08■■□□□ 1.29
SYNE2-201ENST00000341472 ATP2A2P16615 1042 aaKnown RBP23.08■■□□□ 1.29
SYNE2-201ENST00000341472 RBL2Q08999 1139 aa23.08■■□□□ 1.29
SYNE2-201ENST00000341472 MTMR1Q13613 665 aa23.08■■□□□ 1.29
SYNE2-201ENST00000341472 SMIM10L2AP0DMW4 78 aa23.07■■□□□ 1.28
SYNE2-201ENST00000341472 SMIM10L2BP0DMW5 78 aa23.07■■□□□ 1.28
SYNE2-201ENST00000341472 FOSL2P15408 326 aa23.07■■□□□ 1.28
SYNE2-201ENST00000341472 KCNA2P16389 499 aa23.07■■□□□ 1.28
SYNE2-201ENST00000341472 RABGGTBP53611 331 aa23.07■■□□□ 1.28
SYNE2-201ENST00000341472 HIC1Q14526 733 aa23.07■■□□□ 1.28
SYNE2-201ENST00000341472 ATP6V0A1Q93050 837 aa23.07■■□□□ 1.28
SYNE2-201ENST00000341472 TELO2Q9Y4R8 837 aa23.07■■□□□ 1.28
SYNE2-201ENST00000341472 GNAT1P11488 350 aa23.06■■□□□ 1.28
SYNE2-201ENST00000341472 GPNMBQ14956 572 aa23.06■■□□□ 1.28
SYNE2-201ENST00000341472 PFKFB3Q16875 520 aaPredicted RBP23.06■■□□□ 1.28
SYNE2-201ENST00000341472 TRIM71Q2Q1W2 868 aaKnown RBP23.06■■□□□ 1.28
SYNE2-201ENST00000341472 PHOSPHO2Q8TCD6 241 aa23.06■■□□□ 1.28
SYNE2-201ENST00000341472 SEPT1Q8WYJ6 367 aa23.06■■□□□ 1.28
SYNE2-201ENST00000341472 MXRA8Q9BRK3 442 aa23.06■■□□□ 1.28
SYNE2-201ENST00000341472 AGXT2Q9BYV1 514 aa23.06■■□□□ 1.28
SYNE2-201ENST00000341472 NKX2-4Q9H2Z4 354 aa23.06■■□□□ 1.28
SYNE2-201ENST00000341472 RNPEPQ9H4A4 650 aa23.06■■□□□ 1.28
SYNE2-201ENST00000341472 SLC28A3Q9HAS3 691 aa23.06■■□□□ 1.28
SYNE2-201ENST00000341472 ZSWIM6Q9HCJ5 1215 aa23.06■■□□□ 1.28
SYNE2-201ENST00000341472 PKD2L1Q9P0L9 805 aa23.06■■□□□ 1.28
SYNE2-201ENST00000341472 ZNF215Q9UL58 517 aaPredicted RBP23.06■■□□□ 1.28
SYNE2-201ENST00000341472 PCDHA11Q9Y5I1 949 aa23.06■■□□□ 1.28
SYNE2-201ENST00000341472 PRPF3O43395 683 aaKnown RBP23.05■■□□□ 1.28
SYNE2-201ENST00000341472 SCG2P13521 617 aa23.05■■□□□ 1.28
SYNE2-201ENST00000341472 AKAP17AQ02040 695 aaKnown RBP23.05■■□□□ 1.28
SYNE2-201ENST00000341472 ZNF618Q5T7W0 954 aa23.05■■□□□ 1.28
SYNE2-201ENST00000341472 RUFY3Q7L099 469 aa23.05■■□□□ 1.28
SYNE2-201ENST00000341472 SERINC5Q86VE9 423 aa23.05■■□□□ 1.28
SYNE2-201ENST00000341472 YBX2Q9Y2T7 364 aaKnown RBP23.05■■□□□ 1.28
SYNE2-201ENST00000341472 COL6A3P12111 3177 aa23.04■■□□□ 1.28
SYNE2-201ENST00000341472 BAIAP3O94812 1187 aa23.04■■□□□ 1.28
SYNE2-201ENST00000341472 THPOP40225 353 aa23.04■■□□□ 1.28
SYNE2-201ENST00000341472 AP3B2Q13367 1082 aa23.04■■□□□ 1.28
SYNE2-201ENST00000341472 TRIM50Q86XT4 487 aa23.04■■□□□ 1.28
SYNE2-201ENST00000341472 MAFAQ8NHW3 353 aaPredicted RBP23.04■■□□□ 1.28
SYNE2-201ENST00000341472 WNT8BQ93098 351 aa23.04■■□□□ 1.28
SYNE2-201ENST00000341472 PGBD1Q96JS3 809 aa23.04■■□□□ 1.28
SYNE2-201ENST00000341472 ANO3Q9BYT9 981 aa23.04■■□□□ 1.28
SYNE2-201ENST00000341472 SETD4Q9NVD3 440 aa23.04■■□□□ 1.28
SYNE2-201ENST00000341472 TMEM260Q9NX78 707 aa23.04■■□□□ 1.28
SYNE2-201ENST00000341472 CYP46A1Q9Y6A2 500 aa23.04■■□□□ 1.28
SYNE2-201ENST00000341472 GSTTP1A0A1W2PQM5 241 aa23.03■■□□□ 1.28
SYNE2-201ENST00000341472 TREHO43280 583 aa23.03■■□□□ 1.28
SYNE2-201ENST00000341472 NBNO60934 754 aa23.03■■□□□ 1.28
SYNE2-201ENST00000341472 CXCL10P02778 98 aa23.03■■□□□ 1.28
SYNE2-201ENST00000341472 PDIA3P30101 505 aaKnown RBP23.03■■□□□ 1.28
SYNE2-201ENST00000341472 HOXC8P31273 242 aa23.03■■□□□ 1.28
SYNE2-201ENST00000341472 TCF7P36402 384 aaPredicted RBP23.03■■□□□ 1.28
SYNE2-201ENST00000341472 ZNF76P36508 570 aa23.03■■□□□ 1.28
SYNE2-201ENST00000341472 EVCP57679 992 aa23.03■■□□□ 1.28
SYNE2-201ENST00000341472 CEP55Q53EZ4 464 aa23.03■■□□□ 1.28
SYNE2-201ENST00000341472 CYP2W1Q8TAV3 490 aa23.03■■□□□ 1.28
SYNE2-201ENST00000341472 SLC9A7Q96T83 725 aa23.03■■□□□ 1.28
SYNE2-201ENST00000341472 KCNH7Q9NS40 1196 aa23.03■■□□□ 1.28
SYNE2-201ENST00000341472 KIAA1217Q5T5P2 1943 aa23.03■■□□□ 1.28
SYNE2-201ENST00000341472 RSPH10B2B2RC85 870 aa23.02■■□□□ 1.28
SYNE2-201ENST00000341472 KIF28PB7ZC32 967 aa23.02■■□□□ 1.28
SYNE2-201ENST00000341472 RSPH10BP0C881 870 aa23.02■■□□□ 1.28
SYNE2-201ENST00000341472 MYOGP15173 224 aa23.02■■□□□ 1.28
SYNE2-201ENST00000341472 JAKMIP3Q5VZ66 844 aa23.02■■□□□ 1.28
SYNE2-201ENST00000341472 CNKSR3Q6P9H4 555 aa23.02■■□□□ 1.28
SYNE2-201ENST00000341472 TRAF7Q6Q0C0 670 aa23.02■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms