RNA–Protein interactions for RNA: ENST00000341060.3

TDP2-201, Transcript of tyrosyl-DNA phosphodiesterase 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TDP2, Length 2,120 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP2-201ENST00000341060 CYP3A7-CYP3A51PA0A087WV96 503 aa16.1■□□□□ 0.17
TDP2-201ENST00000341060 USP17L15C9J2P7 530 aa16.1■□□□□ 0.17
TDP2-201ENST00000341060 USP17L13C9JLJ4 530 aa16.1■□□□□ 0.17
TDP2-201ENST00000341060 USP17L11C9JVI0 530 aa16.1■□□□□ 0.17
TDP2-201ENST00000341060 USP17L18D6R9N7 530 aa16.1■□□□□ 0.17
TDP2-201ENST00000341060 USP17L22D6RA61 530 aa16.1■□□□□ 0.17
TDP2-201ENST00000341060 USP17L17D6RBQ6 530 aa16.1■□□□□ 0.17
TDP2-201ENST00000341060 USP17L19D6RCP7 530 aa16.1■□□□□ 0.17
TDP2-201ENST00000341060 USP17L20D6RJB6 530 aa16.1■□□□□ 0.17
TDP2-201ENST00000341060 E9PMD0 336 aa16.1■□□□□ 0.17
TDP2-201ENST00000341060 CYP3A7P24462 503 aa16.1■□□□□ 0.17
TDP2-201ENST00000341060 USP17L24Q0WX57 530 aa16.1■□□□□ 0.17
TDP2-201ENST00000341060 CCDC40Q4G0X9 1142 aa16.1■□□□□ 0.17
TDP2-201ENST00000341060 HSP90B2PQ58FF3 399 aa16.1■□□□□ 0.17
TDP2-201ENST00000341060 HGSNATQ68CP4 663 aa16.1■□□□□ 0.17
TDP2-201ENST00000341060 USP17L6PQ6QN14 398 aa16.1■□□□□ 0.17
TDP2-201ENST00000341060 CCDC65Q8IXS2 484 aa16.1■□□□□ 0.17
TDP2-201ENST00000341060 ALS2CR12Q96Q35 445 aa16.1■□□□□ 0.17
TDP2-201ENST00000341060 NUCKS1Q9H1E3 243 aaKnown RBP16.1■□□□□ 0.17
TDP2-201ENST00000341060 MLXIPQ9HAP2 919 aa16.1■□□□□ 0.17
TDP2-201ENST00000341060 CEP72Q9P209 647 aa16.1■□□□□ 0.17
TDP2-201ENST00000341060 KIAA1024Q9UPX6 916 aa16.1■□□□□ 0.17
TDP2-201ENST00000341060 RBAK-RBAKDNI3L0D1 243 aa16.09■□□□□ 0.17
TDP2-201ENST00000341060 MOCS3O95396 460 aa16.09■□□□□ 0.17
TDP2-201ENST00000341060 GNA14O95837 355 aa16.09■□□□□ 0.17
TDP2-201ENST00000341060 DOK7Q18PE1 504 aa16.09■□□□□ 0.17
TDP2-201ENST00000341060 MOXD1Q6UVY6 613 aa16.09■□□□□ 0.17
TDP2-201ENST00000341060 CCDC155Q8N6L0 562 aa16.09■□□□□ 0.17
TDP2-201ENST00000341060 DCAF4Q8WV16 495 aa16.09■□□□□ 0.17
TDP2-201ENST00000341060 SYN2Q92777 582 aaPredicted RBP16.09■□□□□ 0.17
TDP2-201ENST00000341060 MKL1Q969V6 931 aa16.09■□□□□ 0.17
TDP2-201ENST00000341060 MBOAT7Q96N66 472 aa16.09■□□□□ 0.17
TDP2-201ENST00000341060 FGFBP2Q9BYJ0 223 aa16.09■□□□□ 0.17
TDP2-201ENST00000341060 ANO3Q9BYT9 981 aa16.09■□□□□ 0.17
TDP2-201ENST00000341060 PDGFDQ9GZP0 370 aaPredicted RBP16.09■□□□□ 0.17
TDP2-201ENST00000341060 PCDHA1Q9Y5I3 950 aa16.09■□□□□ 0.17
TDP2-201ENST00000341060 POTEB3A0JP26 581 aa16.09■□□□□ 0.17
TDP2-201ENST00000341060 POTECB2RU33 542 aa16.09■□□□□ 0.17
TDP2-201ENST00000341060 SSBP05455 408 aaKnown RBP eCLIP16.09■□□□□ 0.17
TDP2-201ENST00000341060 MMP10P09238 476 aa16.09■□□□□ 0.17
TDP2-201ENST00000341060 PLA2G4BP0C869 781 aa16.09■□□□□ 0.17
TDP2-201ENST00000341060 NPR1P16066 1061 aa16.09■□□□□ 0.17
TDP2-201ENST00000341060 SLC1A4P43007 532 aa16.09■□□□□ 0.17
TDP2-201ENST00000341060 AARSP49588 968 aaKnown RBP eCLIP16.09■□□□□ 0.17
TDP2-201ENST00000341060 POTEBQ6S5H4 581 aa16.09■□□□□ 0.17
TDP2-201ENST00000341060 SLFN12Q8IYM2 578 aa16.09■□□□□ 0.17
TDP2-201ENST00000341060 CCDC102AQ96A19 550 aa16.09■□□□□ 0.17
TDP2-201ENST00000341060 DHX36Q9H2U1 1008 aaKnown RBP16.09■□□□□ 0.17
TDP2-201ENST00000341060 NYAP2Q9P242 653 aa16.09■□□□□ 0.17
TDP2-201ENST00000341060 PITPNM2Q9BZ72 1349 aa16.09■□□□□ 0.17
TDP2-201ENST00000341060 FRMD3A2A2Y4 597 aa16.08■□□□□ 0.16
TDP2-201ENST00000341060 NOL4O94818 638 aa16.08■□□□□ 0.16
TDP2-201ENST00000341060 EEF2P13639 858 aaKnown RBP16.08■□□□□ 0.16
TDP2-201ENST00000341060 TCP1P17987 556 aaKnown RBP16.08■□□□□ 0.16
TDP2-201ENST00000341060 CYP11B2P19099 503 aa16.08■□□□□ 0.16
TDP2-201ENST00000341060 MAGEA1P43355 309 aa16.08■□□□□ 0.16
TDP2-201ENST00000341060 CRKP46108 304 aa16.08■□□□□ 0.16
TDP2-201ENST00000341060 HNRNPH2P55795 449 aaKnown RBP16.08■□□□□ 0.16
TDP2-201ENST00000341060 C2orf54Q08AI8 447 aa16.08■□□□□ 0.16
TDP2-201ENST00000341060 AP3B2Q13367 1082 aa16.08■□□□□ 0.16
TDP2-201ENST00000341060 CDC37Q16543 378 aaPredicted RBP16.08■□□□□ 0.16
TDP2-201ENST00000341060 GPBP1Q86WP2 473 aa16.08■□□□□ 0.16
TDP2-201ENST00000341060 TRIM59Q8IWR1 403 aa16.08■□□□□ 0.16
TDP2-201ENST00000341060 ZC3H3Q8IXZ2 948 aaKnown RBP16.08■□□□□ 0.16
TDP2-201ENST00000341060 MMGT1Q8N4V1 131 aa16.08■□□□□ 0.16
TDP2-201ENST00000341060 CRYGNQ8WXF5 182 aa16.08■□□□□ 0.16
TDP2-201ENST00000341060 ZDHHC15Q96MV8 337 aa16.08■□□□□ 0.16
TDP2-201ENST00000341060 KCTD10Q9H3F6 313 aa16.08■□□□□ 0.16
TDP2-201ENST00000341060 FAN1Q9Y2M0 1017 aa16.08■□□□□ 0.16
TDP2-201ENST00000341060 SLX4Q8IY92 1834 aa16.08■□□□□ 0.16
TDP2-201ENST00000341060 MEIS2O14770 477 aa16.07■□□□□ 0.16
TDP2-201ENST00000341060 SLURP2P0DP57 97 aa16.07■□□□□ 0.16
TDP2-201ENST00000341060 GFPT1Q06210 699 aaPredicted RBP16.07■□□□□ 0.16
TDP2-201ENST00000341060 MUM1L1Q5H9M0 696 aa16.07■□□□□ 0.16
TDP2-201ENST00000341060 HAUS3Q68CZ6 603 aa16.07■□□□□ 0.16
TDP2-201ENST00000341060 ZFPM1Q8IX07 1006 aa16.07■□□□□ 0.16
TDP2-201ENST00000341060 COG1Q8WTW3 980 aa16.07■□□□□ 0.16
TDP2-201ENST00000341060 SCFD1Q8WVM8 642 aa16.07■□□□□ 0.16
TDP2-201ENST00000341060 RUBCNQ92622 972 aa16.07■□□□□ 0.16
TDP2-201ENST00000341060 OSBPL9Q96SU4 736 aa16.07■□□□□ 0.16
TDP2-201ENST00000341060 KANSL2Q9H9L4 492 aa16.07■□□□□ 0.16
TDP2-201ENST00000341060 TBC1D7Q9P0N9 293 aa16.07■□□□□ 0.16
TDP2-201ENST00000341060 HYOU1Q9Y4L1 999 aa16.07■□□□□ 0.16
TDP2-201ENST00000341060 ALDH1B1P30837 517 aa16.07■□□□□ 0.16
TDP2-201ENST00000341060 LMAN1P49257 510 aa16.07■□□□□ 0.16
TDP2-201ENST00000341060 SLC12A3P55017 1021 aa16.07■□□□□ 0.16
TDP2-201ENST00000341060 SPIRE1Q08AE8 756 aa16.07■□□□□ 0.16
TDP2-201ENST00000341060 EDRF1Q3B7T1 1238 aa16.07■□□□□ 0.16
TDP2-201ENST00000341060 SLC9C1Q4G0N8 1177 aa16.07■□□□□ 0.16
TDP2-201ENST00000341060 TDRD12Q587J7 1177 aaKnown RBP16.07■□□□□ 0.16
TDP2-201ENST00000341060 HERC4Q5GLZ8 1057 aaPredicted RBP16.07■□□□□ 0.16
TDP2-201ENST00000341060 FAM83BQ5T0W9 1011 aa16.07■□□□□ 0.16
TDP2-201ENST00000341060 CCDC70Q6NSX1 233 aa16.07■□□□□ 0.16
TDP2-201ENST00000341060 PPP4R3CPQ6ZMV5 832 aa16.07■□□□□ 0.16
TDP2-201ENST00000341060 RNF10Q8N5U6 811 aaKnown RBP16.07■□□□□ 0.16
TDP2-201ENST00000341060 EMILIN3Q9NT22 766 aa16.07■□□□□ 0.16
TDP2-201ENST00000341060 SALL4Q9UJQ4 1053 aa16.07■□□□□ 0.16
TDP2-201ENST00000341060 FAM184BQ9ULE4 1060 aa16.07■□□□□ 0.16
TDP2-201ENST00000341060 HPCAL4Q9UM19 191 aa16.07■□□□□ 0.16
TDP2-201ENST00000341060 UTP18Q9Y5J1 556 aaKnown RBP eCLIP16.07■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 87.8 ms