RNA–Protein interactions for RNA: ENST00000340648.5

RRP1B-201, Transcript of ribosomal RNA processing 1B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RRP1B, Length 5,090 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RRP1B-201ENST00000340648 NCAPHQ15003 741 aa16.13■□□□□ 0.17
RRP1B-201ENST00000340648 CCDC89Q8N998 374 aa16.13■□□□□ 0.17
RRP1B-201ENST00000340648 P3H4Q92791 437 aa16.13■□□□□ 0.17
RRP1B-201ENST00000340648 DDX47Q9H0S4 455 aaKnown RBP16.13■□□□□ 0.17
RRP1B-201ENST00000340648 SH3GLB2Q9NR46 395 aa16.13■□□□□ 0.17
RRP1B-201ENST00000340648 SMARCAL1Q9NZC9 954 aa16.13■□□□□ 0.17
RRP1B-201ENST00000340648 LOC102724428A0A0B4J2F2 783 aa16.13■□□□□ 0.17
RRP1B-201ENST00000340648 PSMC2P35998 433 aaKnown RBP16.13■□□□□ 0.17
RRP1B-201ENST00000340648 EIF3BP55884 814 aaKnown RBP16.13■□□□□ 0.17
RRP1B-201ENST00000340648 SIK1P57059 783 aa16.13■□□□□ 0.17
RRP1B-201ENST00000340648 BEND6Q5SZJ8 279 aaPredicted RBP16.13■□□□□ 0.17
RRP1B-201ENST00000340648 FAM83BQ5T0W9 1011 aa16.13■□□□□ 0.17
RRP1B-201ENST00000340648 LRRC8CQ8TDW0 803 aa16.13■□□□□ 0.17
RRP1B-201ENST00000340648 ATP6V1G3Q96LB4 118 aa16.13■□□□□ 0.17
RRP1B-201ENST00000340648 ISCA1Q9BUE6 129 aa16.13■□□□□ 0.17
RRP1B-201ENST00000340648 CDCA7Q9BWT1 371 aaPredicted RBP16.13■□□□□ 0.17
RRP1B-201ENST00000340648 GMNCA6NCL1 334 aa16.13■□□□□ 0.17
RRP1B-201ENST00000340648 TXNDC9O14530 226 aa16.13■□□□□ 0.17
RRP1B-201ENST00000340648 ANKRD40Q6AI12 368 aa16.13■□□□□ 0.17
RRP1B-201ENST00000340648 CPXCR1Q8N123 301 aa16.13■□□□□ 0.17
RRP1B-201ENST00000340648 HNRNPLLQ8WVV9 542 aaKnown RBP16.13■□□□□ 0.17
RRP1B-201ENST00000340648 H3BQF6 201 aa16.13■□□□□ 0.17
RRP1B-201ENST00000340648 TNNI1P19237 187 aa16.13■□□□□ 0.17
RRP1B-201ENST00000340648 ASPRV1Q53RT3 343 aa16.13■□□□□ 0.17
RRP1B-201ENST00000340648 SNX24Q9Y343 169 aa16.13■□□□□ 0.17
RRP1B-201ENST00000340648 CCDC188H7C350 402 aa16.12■□□□□ 0.17
RRP1B-201ENST00000340648 PTPAQ15257 358 aa16.12■□□□□ 0.17
RRP1B-201ENST00000340648 TMC4Q7Z404 712 aa16.12■□□□□ 0.17
RRP1B-201ENST00000340648 DGKHQ86XP1 1220 aa16.12■□□□□ 0.17
RRP1B-201ENST00000340648 MS4A14Q96JA4 679 aa16.12■□□□□ 0.17
RRP1B-201ENST00000340648 PSMD1Q99460 953 aa16.12■□□□□ 0.17
RRP1B-201ENST00000340648 THRAP3Q9Y2W1 955 aaKnown RBP16.12■□□□□ 0.17
RRP1B-201ENST00000340648 UTYO14607 1347 aa16.12■□□□□ 0.17
RRP1B-201ENST00000340648 PRPF6O94906 941 aaKnown RBP16.12■□□□□ 0.17
RRP1B-201ENST00000340648 IL9RQ01113 521 aa16.12■□□□□ 0.17
RRP1B-201ENST00000340648 CYP4F22Q6NT55 531 aa16.12■□□□□ 0.17
RRP1B-201ENST00000340648 MIER3Q7Z3K6 550 aa16.12■□□□□ 0.17
RRP1B-201ENST00000340648 FBXO11Q86XK2 927 aa16.12■□□□□ 0.17
RRP1B-201ENST00000340648 CTAGE3PQ8IX95 158 aa16.12■□□□□ 0.17
RRP1B-201ENST00000340648 HPS3Q969F9 1004 aa16.12■□□□□ 0.17
RRP1B-201ENST00000340648 ECEL1O95672 775 aa16.12■□□□□ 0.17
RRP1B-201ENST00000340648 SCNN1DP51172 638 aa16.12■□□□□ 0.17
RRP1B-201ENST00000340648 KIFC2Q96AC6 838 aa16.12■□□□□ 0.17
RRP1B-201ENST00000340648 RILPQ96NA2 401 aa16.12■□□□□ 0.17
RRP1B-201ENST00000340648 MTA3Q9BTC8 594 aa16.12■□□□□ 0.17
RRP1B-201ENST00000340648 DNAJC17Q9NVM6 304 aaKnown RBP16.12■□□□□ 0.17
RRP1B-201ENST00000340648 ERVV-1B6SEH8 477 aa16.12■□□□□ 0.17
RRP1B-201ENST00000340648 EIF3HO15372 352 aaKnown RBP eCLIP16.12■□□□□ 0.171e-6■□□□□ 8.3
RRP1B-201ENST00000340648 LUC7L3O95232 432 aaKnown RBP16.12■□□□□ 0.17
RRP1B-201ENST00000340648 STRN3Q13033 797 aa16.12■□□□□ 0.17
RRP1B-201ENST00000340648 KAZNQ674X7 775 aa16.12■□□□□ 0.17
RRP1B-201ENST00000340648 SGO2Q562F6 1265 aa16.11■□□□□ 0.17
RRP1B-201ENST00000340648 PALM2Q8IXS6 379 aa16.11■□□□□ 0.17
RRP1B-201ENST00000340648 ZNF653Q96CK0 615 aa16.11■□□□□ 0.17
RRP1B-201ENST00000340648 TRIM37O94972 964 aa16.11■□□□□ 0.17
RRP1B-201ENST00000340648 DLATP10515 647 aaKnown RBP16.11■□□□□ 0.17
RRP1B-201ENST00000340648 PDIA6Q15084 440 aa16.11■□□□□ 0.17
RRP1B-201ENST00000340648 TRIP13Q15645 432 aaPredicted RBP16.11■□□□□ 0.17
RRP1B-201ENST00000340648 GBP5Q96PP8 586 aa16.11■□□□□ 0.17
RRP1B-201ENST00000340648 ZNF148Q9UQR1 794 aa16.11■□□□□ 0.17
RRP1B-201ENST00000340648 SLFN13Q68D06 897 aa16.11■□□□□ 0.17
RRP1B-201ENST00000340648 ADSSL1Q8N142 457 aa16.11■□□□□ 0.17
RRP1B-201ENST00000340648 CCDC110Q8TBZ0 833 aa16.11■□□□□ 0.17
RRP1B-201ENST00000340648 CD19P15391 556 aa16.11■□□□□ 0.17
RRP1B-201ENST00000340648 GCFC2P16383 781 aaKnown RBP16.11■□□□□ 0.17
RRP1B-201ENST00000340648 PPP2R2AP63151 447 aa16.11■□□□□ 0.17
RRP1B-201ENST00000340648 PPP2R5AQ15172 486 aa16.11■□□□□ 0.17
RRP1B-201ENST00000340648 TBC1D10BQ4KMP7 808 aaPredicted RBP16.11■□□□□ 0.17
RRP1B-201ENST00000340648 FAM102BQ5T8I3 360 aa16.11■□□□□ 0.17
RRP1B-201ENST00000340648 NUGGCQ68CJ6 796 aa16.11■□□□□ 0.17
RRP1B-201ENST00000340648 SRBD1Q8N5C6 995 aaKnown RBP16.11■□□□□ 0.17
RRP1B-201ENST00000340648 PHF20Q9BVI0 1012 aa16.11■□□□□ 0.17
RRP1B-201ENST00000340648 TAF1DQ9H5J8 278 aaPredicted RBP16.11■□□□□ 0.17
RRP1B-201ENST00000340648 RAB20Q9NX57 234 aa16.11■□□□□ 0.17
RRP1B-201ENST00000340648 SLAIN2Q9P270 581 aa16.11■□□□□ 0.17
RRP1B-201ENST00000340648 TRPC3Q13507 836 aa16.1■□□□□ 0.17
RRP1B-201ENST00000340648 TMED2Q15363 201 aa16.1■□□□□ 0.17
RRP1B-201ENST00000340648 HVCN1Q96D96 273 aa16.1■□□□□ 0.17
RRP1B-201ENST00000340648 LARSQ9P2J5 1176 aaKnown RBP16.1■□□□□ 0.17
RRP1B-201ENST00000340648 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP16.1■□□□□ 0.17
RRP1B-201ENST00000340648 PSMD14O00487 310 aa16.1■□□□□ 0.17
RRP1B-201ENST00000340648 ACSL3O95573 720 aa16.1■□□□□ 0.17
RRP1B-201ENST00000340648 SEPT2Q15019 361 aa16.1■□□□□ 0.17
RRP1B-201ENST00000340648 PRDX5P30044 214 aa16.1■□□□□ 0.17
RRP1B-201ENST00000340648 IRAK1P51617 712 aa16.1■□□□□ 0.17
RRP1B-201ENST00000340648 HPSEQ9Y251 543 aa16.1■□□□□ 0.17
RRP1B-201ENST00000340648 PPP1R37O75864 691 aa16.1■□□□□ 0.17
RRP1B-201ENST00000340648 HMGB2P26583 209 aaKnown RBP16.1■□□□□ 0.17
RRP1B-201ENST00000340648 ERVK-24P63145 666 aa16.1■□□□□ 0.17
RRP1B-201ENST00000340648 HDLBPQ00341 1268 aaKnown RBP16.1■□□□□ 0.17
RRP1B-201ENST00000340648 ITIH3Q06033 890 aa16.1■□□□□ 0.17
RRP1B-201ENST00000340648 SLMAPQ14BN4 828 aa16.1■□□□□ 0.17
RRP1B-201ENST00000340648 SH2D4AQ9H788 454 aa16.1■□□□□ 0.17
RRP1B-201ENST00000340648 MEFVO15553 781 aaPredicted RBP16.09■□□□□ 0.17
RRP1B-201ENST00000340648 BAG2O95816 211 aa16.09■□□□□ 0.17
RRP1B-201ENST00000340648 SRGNP10124 158 aa16.09■□□□□ 0.17
RRP1B-201ENST00000340648 DDX55Q8NHQ9 600 aaKnown RBP eCLIP16.09■□□□□ 0.172e-6■■■□□ 14.8
RRP1B-201ENST00000340648 PCIF1Q9H4Z3 704 aa16.09■□□□□ 0.17
RRP1B-201ENST00000340648 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP16.09■□□□□ 0.17
RRP1B-201ENST00000340648 CEMIPQ8WUJ3 1361 aa16.09■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms