RNA–Protein interactions for RNA: ENST00000340157.8

VRK2-201, Transcript of vaccinia related kinase 2, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VRK2, Length 1,888 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK2-201ENST00000340157 GIMAP8Q8ND71 665 aaPredicted RBP23.71■■□□□ 1.39
VRK2-201ENST00000340157 RIT2Q99578 217 aa23.71■■□□□ 1.39
VRK2-201ENST00000340157 PKD2L1Q9P0L9 805 aa23.71■■□□□ 1.39
VRK2-201ENST00000340157 NFE2L3Q9Y4A8 694 aa23.71■■□□□ 1.39
VRK2-201ENST00000340157 TRPM7Q96QT4 1865 aa23.71■■□□□ 1.39
VRK2-201ENST00000340157 ASTN1O14525 1302 aa23.71■■□□□ 1.39
VRK2-201ENST00000340157 SOCS7O14512 581 aa23.7■■□□□ 1.39
VRK2-201ENST00000340157 NR3C2P08235 984 aa23.7■■□□□ 1.39
VRK2-201ENST00000340157 STX17P56962 302 aa23.7■■□□□ 1.39
VRK2-201ENST00000340157 FKBP1BP68106 108 aa23.7■■□□□ 1.39
VRK2-201ENST00000340157 SEMA3FQ13275 785 aa23.7■■□□□ 1.39
VRK2-201ENST00000340157 MTMR1Q13613 665 aa23.7■■□□□ 1.39
VRK2-201ENST00000340157 DYMQ7RTS9 669 aa23.7■■□□□ 1.39
VRK2-201ENST00000340157 DDX12PQ92771 950 aa23.7■■□□□ 1.39
VRK2-201ENST00000340157 DNAJC19Q96DA6 116 aa23.7■■□□□ 1.39
VRK2-201ENST00000340157 PAGR1Q9BTK6 254 aa23.7■■□□□ 1.39
VRK2-201ENST00000340157 MAF1Q9H063 256 aa23.7■■□□□ 1.39
VRK2-201ENST00000340157 RBPJLQ9UBG7 517 aa23.7■■□□□ 1.39
VRK2-201ENST00000340157 CTNND2Q9UQB3 1225 aa23.7■■□□□ 1.39
VRK2-201ENST00000340157 DOCK5Q9H7D0 1870 aa23.7■■□□□ 1.38
VRK2-201ENST00000340157 SYNRGQ9UMZ2 1314 aa23.7■■□□□ 1.38
VRK2-201ENST00000340157 CELF2O95319 508 aaKnown RBP23.7■■□□□ 1.38
VRK2-201ENST00000340157 PLA2G4BP0C869 781 aa23.7■■□□□ 1.38
VRK2-201ENST00000340157 ZNF18P17022 549 aa23.7■■□□□ 1.38
VRK2-201ENST00000340157 SLC12A3P55017 1021 aa23.7■■□□□ 1.38
VRK2-201ENST00000340157 NSUN6Q8TEA1 469 aaKnown RBP23.7■■□□□ 1.38
VRK2-201ENST00000340157 TRIM44Q96DX7 344 aaPredicted RBP23.7■■□□□ 1.38
VRK2-201ENST00000340157 MS4A4AQ96JQ5 239 aa23.7■■□□□ 1.38
VRK2-201ENST00000340157 TEKT3Q9BXF9 490 aa23.7■■□□□ 1.38
VRK2-201ENST00000340157 MOV10L1Q9BXT6 1211 aaKnown RBP23.7■■□□□ 1.38
VRK2-201ENST00000340157 MAPK8IP1Q9UQF2 711 aa23.7■■□□□ 1.38
VRK2-201ENST00000340157 STK24Q9Y6E0 443 aa23.7■■□□□ 1.38
VRK2-201ENST00000340157 WDR81Q562E7 1941 aa23.7■■□□□ 1.38
VRK2-201ENST00000340157 COBLO75128 1261 aa23.69■■□□□ 1.38
VRK2-201ENST00000340157 SLITRK3O94933 977 aa23.69■■□□□ 1.38
VRK2-201ENST00000340157 UNC13DQ70J99 1090 aa23.69■■□□□ 1.38
VRK2-201ENST00000340157 ADSSL1Q8N142 457 aa23.69■■□□□ 1.38
VRK2-201ENST00000340157 MRFAP1L1Q96HT8 127 aa23.69■■□□□ 1.38
VRK2-201ENST00000340157 RGS20O76081 388 aa23.68■■□□□ 1.38
VRK2-201ENST00000340157 FCER1AP12319 257 aa23.68■■□□□ 1.38
VRK2-201ENST00000340157 TPM4P67936 248 aa23.68■■□□□ 1.38
VRK2-201ENST00000340157 EHHADHQ08426 723 aa23.68■■□□□ 1.38
VRK2-201ENST00000340157 PDE4DQ08499 809 aa23.68■■□□□ 1.38
VRK2-201ENST00000340157 STK4Q13043 487 aa23.68■■□□□ 1.38
VRK2-201ENST00000340157 XRRA1Q6P2D8 792 aa23.68■■□□□ 1.38
VRK2-201ENST00000340157 ZNF526Q8TF50 670 aaPredicted RBP23.68■■□□□ 1.38
VRK2-201ENST00000340157 HPS3Q969F9 1004 aa23.68■■□□□ 1.38
VRK2-201ENST00000340157 DYDC2Q96IM9 177 aa23.68■■□□□ 1.38
VRK2-201ENST00000340157 EXOC1Q9NV70 894 aa23.68■■□□□ 1.38
VRK2-201ENST00000340157 LRRC37A2A6NM11 1700 aa23.68■■□□□ 1.38
VRK2-201ENST00000340157 PVALEFA0A1B0GWK0 134 aa23.68■■□□□ 1.38
VRK2-201ENST00000340157 DDX39AO00148 427 aaKnown RBP23.68■■□□□ 1.38
VRK2-201ENST00000340157 ATP9AO75110 1047 aa23.68■■□□□ 1.38
VRK2-201ENST00000340157 CYP11B2P19099 503 aa23.68■■□□□ 1.38
VRK2-201ENST00000340157 CCND2P30279 289 aa23.68■■□□□ 1.38
VRK2-201ENST00000340157 CNTN2Q02246 1040 aa23.68■■□□□ 1.38
VRK2-201ENST00000340157 CTTNQ14247 550 aaKnown RBP23.68■■□□□ 1.38
VRK2-201ENST00000340157 Q3C1V9 767 aa23.68■■□□□ 1.38
VRK2-201ENST00000340157 CST9Q5W186 159 aa23.68■■□□□ 1.38
VRK2-201ENST00000340157 SPC24Q8NBT2 197 aa23.68■■□□□ 1.38
VRK2-201ENST00000340157 KIAA0895Q8NCT3 520 aa23.68■■□□□ 1.38
VRK2-201ENST00000340157 TUFT1Q9NNX1 390 aa23.68■■□□□ 1.38
VRK2-201ENST00000340157 SAMSN1Q9NSI8 373 aaKnown RBP23.68■■□□□ 1.38
VRK2-201ENST00000340157 WRAP73Q9P2S5 460 aaPredicted RBP23.68■■□□□ 1.38
VRK2-201ENST00000340157 SSBP05455 408 aaKnown RBP eCLIP23.67■■□□□ 1.38
VRK2-201ENST00000340157 OSBPP22059 807 aa23.67■■□□□ 1.38
VRK2-201ENST00000340157 CDC25BP30305 580 aa23.67■■□□□ 1.38
VRK2-201ENST00000340157 FANCCQ00597 558 aa23.67■■□□□ 1.38
VRK2-201ENST00000340157 MKRN3Q13064 507 aaKnown RBP23.67■■□□□ 1.38
VRK2-201ENST00000340157 HSP90AA4PQ58FG1 418 aa23.67■■□□□ 1.38
VRK2-201ENST00000340157 ARSHQ5FYA8 562 aa23.67■■□□□ 1.38
VRK2-201ENST00000340157 SPATA1Q5VX52 437 aa23.67■■□□□ 1.38
VRK2-201ENST00000340157 ARHGAP30Q7Z6I6 1101 aaPredicted RBP23.67■■□□□ 1.38
VRK2-201ENST00000340157 INPP4AQ96PE3 977 aaPredicted RBP23.67■■□□□ 1.38
VRK2-201ENST00000340157 IFNKQ9P0W0 207 aa23.67■■□□□ 1.38
VRK2-201ENST00000340157 FBXO40Q9UH90 709 aa23.67■■□□□ 1.38
VRK2-201ENST00000340157 TESPA1A2RU30 521 aaPredicted RBP23.66■■□□□ 1.38
VRK2-201ENST00000340157 ITGBL1O95965 494 aaPredicted RBP23.66■■□□□ 1.38
VRK2-201ENST00000340157 PABPC4Q13310 644 aaKnown RBP eCLIP23.66■■□□□ 1.38
VRK2-201ENST00000340157 HS1BP3Q53T59 392 aa23.66■■□□□ 1.38
VRK2-201ENST00000340157 GPBP1Q86WP2 473 aa23.66■■□□□ 1.38
VRK2-201ENST00000340157 NCAPG2Q86XI2 1143 aa23.66■■□□□ 1.38
VRK2-201ENST00000340157 NELFBQ8WX92 580 aa23.66■■□□□ 1.38
VRK2-201ENST00000340157 XPO4Q9C0E2 1151 aaKnown RBP23.66■■□□□ 1.38
VRK2-201ENST00000340157 LRRC27Q9C0I9 530 aa23.66■■□□□ 1.38
VRK2-201ENST00000340157 RWDD2AQ9UIY3 292 aa23.66■■□□□ 1.38
VRK2-201ENST00000340157 ZNFX1Q9P2E3 1918 aaKnown RBP23.66■■□□□ 1.38
VRK2-201ENST00000340157 LOXHD1Q8IVV2 1947 aa23.66■■□□□ 1.38
VRK2-201ENST00000340157 NPHP3-ACAD11A0A0J9YXS1 232 aa23.66■■□□□ 1.38
VRK2-201ENST00000340157 ERCC3P19447 782 aa23.66■■□□□ 1.38
VRK2-201ENST00000340157 FSTL1Q12841 308 aa23.66■■□□□ 1.38
VRK2-201ENST00000340157 PAK1Q13153 545 aa23.66■■□□□ 1.38
VRK2-201ENST00000340157 EPHA7Q15375 998 aa23.66■■□□□ 1.38
VRK2-201ENST00000340157 ANKRD35Q8N283 1001 aa23.66■■□□□ 1.38
VRK2-201ENST00000340157 SYT2Q8N9I0 419 aaPredicted RBP23.66■■□□□ 1.38
VRK2-201ENST00000340157 DNM3Q9UQ16 869 aa23.66■■□□□ 1.38
VRK2-201ENST00000340157 PFASO15067 1338 aa23.65■■□□□ 1.38
VRK2-201ENST00000340157 CYP2C8P10632 490 aa23.65■■□□□ 1.38
VRK2-201ENST00000340157 PMS1P54277 932 aaKnown RBP23.65■■□□□ 1.38
VRK2-201ENST00000340157 C2orf69Q8N8R5 385 aa23.65■■□□□ 1.38
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms