RNA–Protein interactions for RNA: ENST00000340074.9

UBE3B-201, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 1 (best) BASIC

Gene UBE3B, Length 1,448 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-201ENST00000340074 IGLV3-22A0A075B6J6 115 aa17.36■□□□□ 0.37
UBE3B-201ENST00000340074 NOP56O00567 594 aaKnown RBP17.36■□□□□ 0.37
UBE3B-201ENST00000340074 HMGN5P82970 282 aaKnown RBP17.36■□□□□ 0.37
UBE3B-201ENST00000340074 TRIM29Q14134 588 aa17.36■□□□□ 0.37
UBE3B-201ENST00000340074 NIPA1Q7RTP0 329 aa17.36■□□□□ 0.37
UBE3B-201ENST00000340074 ZMYND8Q9ULU4 1186 aaPredicted RBP17.36■□□□□ 0.37
UBE3B-201ENST00000340074 TELO2Q9Y4R8 837 aa17.36■□□□□ 0.37
UBE3B-201ENST00000340074 MYH9P35579 1960 aaKnown RBP17.36■□□□□ 0.37
UBE3B-201ENST00000340074 PPFIA4O75335 1185 aa17.35■□□□□ 0.37
UBE3B-201ENST00000340074 MMP1P03956 469 aa17.35■□□□□ 0.37
UBE3B-201ENST00000340074 ZNF286BP0CG31 522 aa17.35■□□□□ 0.37
UBE3B-201ENST00000340074 HOXD8P13378 290 aaPredicted RBP17.35■□□□□ 0.37
UBE3B-201ENST00000340074 SYN1P17600 705 aa17.35■□□□□ 0.37
UBE3B-201ENST00000340074 CIITAP33076 1130 aa17.35■□□□□ 0.37
UBE3B-201ENST00000340074 KRT2P35908 639 aa17.35■□□□□ 0.37
UBE3B-201ENST00000340074 USP11P51784 963 aa17.35■□□□□ 0.37
UBE3B-201ENST00000340074 SP4Q02446 784 aa17.35■□□□□ 0.37
UBE3B-201ENST00000340074 KRT40Q6A162 431 aa17.35■□□□□ 0.37
UBE3B-201ENST00000340074 ANKRD33Q7Z3H0 272 aa17.35■□□□□ 0.37
UBE3B-201ENST00000340074 KRT25Q7Z3Z0 450 aa17.35■□□□□ 0.37
UBE3B-201ENST00000340074 PLA2G4DQ86XP0 818 aa17.35■□□□□ 0.37
UBE3B-201ENST00000340074 FAM184AQ8NB25 1140 aa17.35■□□□□ 0.37
UBE3B-201ENST00000340074 SLC43A3Q8NBI5 491 aa17.35■□□□□ 0.37
UBE3B-201ENST00000340074 PPP1R13LQ8WUF5 828 aa17.35■□□□□ 0.37
UBE3B-201ENST00000340074 GPR20Q99678 358 aa17.35■□□□□ 0.37
UBE3B-201ENST00000340074 AGO4Q9HCK5 861 aaKnown RBP17.35■□□□□ 0.37
UBE3B-201ENST00000340074 PCDH10Q9P2E7 1040 aa17.35■□□□□ 0.37
UBE3B-201ENST00000340074 MROH7Q68CQ1 1323 aa17.35■□□□□ 0.37
UBE3B-201ENST00000340074 CCDC194A0A1B0GVG4 234 aa17.34■□□□□ 0.37
UBE3B-201ENST00000340074 CHMP4BP1P59074 171 aa17.34■□□□□ 0.37
UBE3B-201ENST00000340074 GUCY1B3Q02153 619 aa17.34■□□□□ 0.37
UBE3B-201ENST00000340074 NR5A1Q13285 461 aa17.34■□□□□ 0.37
UBE3B-201ENST00000340074 NONOQ15233 471 aaKnown RBP eCLIP17.34■□□□□ 0.37
UBE3B-201ENST00000340074 INF2Q27J81 1249 aa17.34■□□□□ 0.37
UBE3B-201ENST00000340074 KAT2BQ92831 832 aa17.34■□□□□ 0.37
UBE3B-201ENST00000340074 UIMC1Q96RL1 719 aa17.34■□□□□ 0.37
UBE3B-201ENST00000340074 BRMS1Q9HCU9 246 aa17.34■□□□□ 0.37
UBE3B-201ENST00000340074 DCDC2CA8MYV0 355 aa17.33■□□□□ 0.36
UBE3B-201ENST00000340074 SETQ01105 290 aaPredicted RBP17.33■□□□□ 0.36
UBE3B-201ENST00000340074 FAAP100Q0VG06 881 aa17.33■□□□□ 0.36
UBE3B-201ENST00000340074 ITGB3BPQ13352 177 aaPredicted RBP17.33■□□□□ 0.36
UBE3B-201ENST00000340074 NBPF20Q3BBV1 942 aa17.33■□□□□ 0.36
UBE3B-201ENST00000340074 PRR16Q569H4 304 aa17.33■□□□□ 0.36
UBE3B-201ENST00000340074 EARS2Q5JPH6 523 aaKnown RBP17.33■□□□□ 0.36
UBE3B-201ENST00000340074 PRPF38BQ5VTL8 546 aaKnown RBP17.33■□□□□ 0.36
UBE3B-201ENST00000340074 PIK3AP1Q6ZUJ8 805 aa17.33■□□□□ 0.36
UBE3B-201ENST00000340074 FAM126BQ8IXS8 530 aa17.33■□□□□ 0.36
UBE3B-201ENST00000340074 LENG9Q96B70 501 aa17.33■□□□□ 0.36
UBE3B-201ENST00000340074 C8orf76Q96K31 380 aa17.33■□□□□ 0.36
UBE3B-201ENST00000340074 TOX2Q96NM4 488 aa17.33■□□□□ 0.36
UBE3B-201ENST00000340074 SDF4Q9BRK5 362 aa17.33■□□□□ 0.36
UBE3B-201ENST00000340074 NFASCO94856 1347 aa17.32■□□□□ 0.36
UBE3B-201ENST00000340074 BTBD18B2RXH4 712 aa17.32■□□□□ 0.36
UBE3B-201ENST00000340074 F2P00734 622 aa17.32■□□□□ 0.36
UBE3B-201ENST00000340074 CLTBP09497 229 aa17.32■□□□□ 0.36
UBE3B-201ENST00000340074 SH3RF1Q7Z6J0 888 aa17.32■□□□□ 0.36
UBE3B-201ENST00000340074 DIS3L2Q8IYB7 885 aaKnown RBP17.32■□□□□ 0.36
UBE3B-201ENST00000340074 TNFRSF25Q93038 417 aa17.32■□□□□ 0.36
UBE3B-201ENST00000340074 ZNF577Q9BSK1 485 aa17.32■□□□□ 0.36
UBE3B-201ENST00000340074 C16orf70Q9BSU1 422 aa17.32■□□□□ 0.36
UBE3B-201ENST00000340074 SEZ6LQ9BYH1 1024 aa17.32■□□□□ 0.36
UBE3B-201ENST00000340074 JPH1Q9HDC5 661 aaPredicted RBP17.32■□□□□ 0.36
UBE3B-201ENST00000340074 PRDM5Q9NQX1 630 aaPredicted RBP17.32■□□□□ 0.36
UBE3B-201ENST00000340074 PDLIM7Q9NR12 457 aa17.32■□□□□ 0.36
UBE3B-201ENST00000340074 SLC9A2Q9UBY0 812 aa17.32■□□□□ 0.36
UBE3B-201ENST00000340074 RANBP2P49792 3224 aaKnown RBP17.32■□□□□ 0.36
UBE3B-201ENST00000340074 FAM205CA6NFA0 338 aa17.31■□□□□ 0.36
UBE3B-201ENST00000340074 DDX39AO00148 427 aaKnown RBP17.31■□□□□ 0.36
UBE3B-201ENST00000340074 IPO5O00410 1097 aaKnown RBP17.31■□□□□ 0.36
UBE3B-201ENST00000340074 TDP2O95551 362 aa17.31■□□□□ 0.36
UBE3B-201ENST00000340074 LGALS2P05162 132 aa17.31■□□□□ 0.36
UBE3B-201ENST00000340074 TCF7P36402 384 aaPredicted RBP17.31■□□□□ 0.36
UBE3B-201ENST00000340074 PSEN2P49810 448 aa17.31■□□□□ 0.36
UBE3B-201ENST00000340074 MFSD10Q14728 455 aa17.31■□□□□ 0.36
UBE3B-201ENST00000340074 KIAA0753Q2KHM9 967 aa17.31■□□□□ 0.36
UBE3B-201ENST00000340074 FAM47CQ5HY64 1035 aa17.31■□□□□ 0.36
UBE3B-201ENST00000340074 NFRKBQ6P4R8 1299 aa17.31■□□□□ 0.36
UBE3B-201ENST00000340074 KATNAL1Q9BW62 490 aa17.31■□□□□ 0.36
UBE3B-201ENST00000340074 PRKAG2Q9UGJ0 569 aa17.31■□□□□ 0.36
UBE3B-201ENST00000340074 CYP3A7-CYP3A51PA0A087WV96 503 aa17.3■□□□□ 0.36
UBE3B-201ENST00000340074 GSTTP1A0A1W2PQM5 241 aa17.3■□□□□ 0.36
UBE3B-201ENST00000340074 DHX15O43143 795 aaKnown RBP17.3■□□□□ 0.36
UBE3B-201ENST00000340074 B4GALT4O60513 344 aa17.3■□□□□ 0.36
UBE3B-201ENST00000340074 CD4P01730 458 aa17.3■□□□□ 0.36
UBE3B-201ENST00000340074 CYP3A7P24462 503 aa17.3■□□□□ 0.36
UBE3B-201ENST00000340074 LETM2Q2VYF4 491 aa17.3■□□□□ 0.36
UBE3B-201ENST00000340074 UTP14CQ5TAP6 766 aaKnown RBP17.3■□□□□ 0.36
UBE3B-201ENST00000340074 NEK8Q86SG6 692 aa17.3■□□□□ 0.36
UBE3B-201ENST00000340074 FBXO18Q8NFZ0 1043 aa17.3■□□□□ 0.36
UBE3B-201ENST00000340074 SEPT1Q8WYJ6 367 aa17.3■□□□□ 0.36
UBE3B-201ENST00000340074 TRPV6Q9H1D0 765 aa17.3■□□□□ 0.36
UBE3B-201ENST00000340074 TMEM39AQ9NV64 488 aa17.3■□□□□ 0.36
UBE3B-201ENST00000340074 TRIM43BA6NCK2 446 aa17.3■□□□□ 0.36
UBE3B-201ENST00000340074 H3BRB1 525 aa17.3■□□□□ 0.36
UBE3B-201ENST00000340074 HAS3O00219 553 aa17.3■□□□□ 0.36
UBE3B-201ENST00000340074 TLR3O15455 904 aaKnown RBP17.3■□□□□ 0.36
UBE3B-201ENST00000340074 GJB2P29033 226 aa17.3■□□□□ 0.36
UBE3B-201ENST00000340074 SAFBQ15424 915 aaKnown RBP eCLIP17.3■□□□□ 0.36
UBE3B-201ENST00000340074 Q4G0T1 1027 aa17.3■□□□□ 0.36
UBE3B-201ENST00000340074 MOXD1Q6UVY6 613 aa17.3■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms