RNA–Protein interactions for RNA: ENST00000339276.5

SFN-201, Transcript of stratifin, humanhuman

APPRIS P1 BASIC

Gene SFN, Length 1,320 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFN-201ENST00000339276 DDX25Q9UHL0 483 aaKnown RBP18.99■□□□□ 0.63
SFN-201ENST00000339276 TELO2Q9Y4R8 837 aa18.99■□□□□ 0.63
SFN-201ENST00000339276 A6NJR5 290 aa18.98■□□□□ 0.63
SFN-201ENST00000339276 MSH4O15457 936 aa18.98■□□□□ 0.63
SFN-201ENST00000339276 ASGR1P07306 291 aa18.98■□□□□ 0.63
SFN-201ENST00000339276 MMP3P08254 477 aa18.98■□□□□ 0.63
SFN-201ENST00000339276 ATP2B1P20020 1258 aa18.98■□□□□ 0.63
SFN-201ENST00000339276 SP4Q02446 784 aa18.98■□□□□ 0.63
SFN-201ENST00000339276 HSDL1Q3SXM5 330 aa18.98■□□□□ 0.63
SFN-201ENST00000339276 PPP4R3AQ6IN85 833 aa18.98■□□□□ 0.63
SFN-201ENST00000339276 METTL7BQ6UX53 244 aa18.98■□□□□ 0.63
SFN-201ENST00000339276 ZNF577Q9BSK1 485 aa18.98■□□□□ 0.63
SFN-201ENST00000339276 PHF24Q9UPV7 400 aa18.98■□□□□ 0.63
SFN-201ENST00000339276 IPO5O00410 1097 aaKnown RBP18.97■□□□□ 0.63
SFN-201ENST00000339276 COL6A1P12109 1028 aa18.97■□□□□ 0.63
SFN-201ENST00000339276 GCFC2P16383 781 aaKnown RBP18.97■□□□□ 0.63
SFN-201ENST00000339276 ACLYP53396 1101 aa18.97■□□□□ 0.63
SFN-201ENST00000339276 PCSK9Q8NBP7 692 aaKnown RBP18.97■□□□□ 0.63
SFN-201ENST00000339276 GIMAP8Q8ND71 665 aaPredicted RBP18.97■□□□□ 0.63
SFN-201ENST00000339276 PPTC7Q8NI37 304 aa18.97■□□□□ 0.63
SFN-201ENST00000339276 GJA10Q969M2 543 aa18.97■□□□□ 0.63
SFN-201ENST00000339276 FERMT2Q96AC1 680 aa18.97■□□□□ 0.63
SFN-201ENST00000339276 NAP1L4Q99733 375 aaKnown RBP18.97■□□□□ 0.63
SFN-201ENST00000339276 SDF4Q9BRK5 362 aa18.97■□□□□ 0.63
SFN-201ENST00000339276 TSEN34Q9BSV6 310 aaKnown RBP18.97■□□□□ 0.63
SFN-201ENST00000339276 NFASCO94856 1347 aa18.96■□□□□ 0.63
SFN-201ENST00000339276 DDX39AO00148 427 aaKnown RBP18.96■□□□□ 0.63
SFN-201ENST00000339276 DHX15O43143 795 aaKnown RBP18.96■□□□□ 0.63
SFN-201ENST00000339276 STX6O43752 255 aa18.96■□□□□ 0.63
SFN-201ENST00000339276 MYL3P08590 195 aa18.96■□□□□ 0.63
SFN-201ENST00000339276 CXCL17Q6UXB2 119 aa18.96■□□□□ 0.63
SFN-201ENST00000339276 FERMT3Q86UX7 667 aa18.96■□□□□ 0.63
SFN-201ENST00000339276 POTEDQ86YR6 584 aa18.96■□□□□ 0.63
SFN-201ENST00000339276 ETNPPLQ8TBG4 499 aa18.96■□□□□ 0.63
SFN-201ENST00000339276 C11orf49Q9H6J7 331 aa18.96■□□□□ 0.63
SFN-201ENST00000339276 JPH1Q9HDC5 661 aaPredicted RBP18.96■□□□□ 0.63
SFN-201ENST00000339276 MTMR6Q9Y217 621 aa18.96■□□□□ 0.63
SFN-201ENST00000339276 MKI67P46013 3256 aaKnown RBP18.95■□□□□ 0.62
SFN-201ENST00000339276 A0A1W2PQ45 241 aaPredicted RBP18.95■□□□□ 0.62
SFN-201ENST00000339276 A0A1W2PQY0 241 aa18.95■□□□□ 0.62
SFN-201ENST00000339276 MOXD2PA6NHM9 499 aa18.95■□□□□ 0.62
SFN-201ENST00000339276 NOP56O00567 594 aaKnown RBP18.95■□□□□ 0.62
SFN-201ENST00000339276 ZEB2O60315 1214 aa18.95■□□□□ 0.62
SFN-201ENST00000339276 TOB1P50616 345 aaPredicted RBP18.95■□□□□ 0.62
SFN-201ENST00000339276 PURAQ00577 322 aaKnown RBP18.95■□□□□ 0.62
SFN-201ENST00000339276 NBR1Q14596 966 aa18.95■□□□□ 0.62
SFN-201ENST00000339276 BRDTQ58F21 947 aaPredicted RBP18.95■□□□□ 0.62
SFN-201ENST00000339276 NECAB2Q7Z6G3 386 aa18.95■□□□□ 0.62
SFN-201ENST00000339276 SLC5A5Q92911 643 aa18.95■□□□□ 0.62
SFN-201ENST00000339276 GPR20Q99678 358 aa18.95■□□□□ 0.62
SFN-201ENST00000339276 SENP6Q9GZR1 1112 aaPredicted RBP18.95■□□□□ 0.62
SFN-201ENST00000339276 SLC9A2Q9UBY0 812 aa18.95■□□□□ 0.62
SFN-201ENST00000339276 NOL7Q9UMY1 257 aaKnown RBP18.95■□□□□ 0.62
SFN-201ENST00000339276 ZNF286BP0CG31 522 aa18.94■□□□□ 0.62
SFN-201ENST00000339276 HOXD8P13378 290 aaPredicted RBP18.94■□□□□ 0.62
SFN-201ENST00000339276 DGKDQ16760 1214 aa18.94■□□□□ 0.62
SFN-201ENST00000339276 TTC38Q5R3I4 469 aa18.94■□□□□ 0.62
SFN-201ENST00000339276 KCNMB3Q9NPA1 279 aa18.94■□□□□ 0.62
SFN-201ENST00000339276 POLR3EQ9NVU0 708 aa18.94■□□□□ 0.62
SFN-201ENST00000339276 CCNE2O96020 404 aa18.93■□□□□ 0.62
SFN-201ENST00000339276 MCM7P33993 719 aa18.93■□□□□ 0.62
SFN-201ENST00000339276 TRAPPC10P48553 1259 aa18.93■□□□□ 0.62
SFN-201ENST00000339276 RESTQ13127 1097 aa18.93■□□□□ 0.62
SFN-201ENST00000339276 ZNF174Q15697 407 aa18.93■□□□□ 0.62
SFN-201ENST00000339276 LRCH2Q5VUJ6 765 aa18.93■□□□□ 0.62
SFN-201ENST00000339276 HAS1Q92839 578 aa18.93■□□□□ 0.62
SFN-201ENST00000339276 TBC1D22BQ9NU19 505 aa18.93■□□□□ 0.62
SFN-201ENST00000339276 GSTTP1A0A1W2PQM5 241 aa18.92■□□□□ 0.62
SFN-201ENST00000339276 NEMFO60524 1076 aa18.92■□□□□ 0.62
SFN-201ENST00000339276 GAS7O60861 476 aa18.92■□□□□ 0.62
SFN-201ENST00000339276 PSMD10O75832 226 aa18.92■□□□□ 0.62
SFN-201ENST00000339276 ACTR2P61160 394 aa18.92■□□□□ 0.62
SFN-201ENST00000339276 PSMC6P62333 389 aa18.92■□□□□ 0.62
SFN-201ENST00000339276 BRAPQ7Z569 592 aa18.92■□□□□ 0.62
SFN-201ENST00000339276 GLT1D1Q96MS3 346 aa18.92■□□□□ 0.62
SFN-201ENST00000339276 RIT2Q99578 217 aa18.92■□□□□ 0.62
SFN-201ENST00000339276 MTG1Q9BT17 334 aaPredicted RBP18.92■□□□□ 0.62
SFN-201ENST00000339276 TEKT3Q9BXF9 490 aa18.92■□□□□ 0.62
SFN-201ENST00000339276 STARD7Q9NQZ5 370 aa18.92■□□□□ 0.62
SFN-201ENST00000339276 PCDHB6Q9Y5E3 794 aa18.92■□□□□ 0.62
SFN-201ENST00000339276 ALPK3Q96L96 1907 aa18.91■□□□□ 0.62
SFN-201ENST00000339276 SCN10AQ9Y5Y9 1956 aa18.91■□□□□ 0.62
SFN-201ENST00000339276 KPNA6O60684 536 aa18.91■□□□□ 0.62
SFN-201ENST00000339276 PPFIA4O75335 1185 aa18.91■□□□□ 0.62
SFN-201ENST00000339276 LGALS2P05162 132 aa18.91■□□□□ 0.62
SFN-201ENST00000339276 TCF7P36402 384 aaPredicted RBP18.91■□□□□ 0.62
SFN-201ENST00000339276 ATN1P54259 1190 aaPredicted RBP18.91■□□□□ 0.62
SFN-201ENST00000339276 PKP1Q13835 747 aa18.91■□□□□ 0.62
SFN-201ENST00000339276 CALCRLQ16602 461 aa18.91■□□□□ 0.62
SFN-201ENST00000339276 UTP14CQ5TAP6 766 aaKnown RBP18.91■□□□□ 0.62
SFN-201ENST00000339276 TRIM50Q86XT4 487 aa18.91■□□□□ 0.62
SFN-201ENST00000339276 SEPT1Q8WYJ6 367 aa18.91■□□□□ 0.62
SFN-201ENST00000339276 KAT2BQ92831 832 aa18.91■□□□□ 0.62
SFN-201ENST00000339276 VTI1AQ96AJ9 217 aa18.91■□□□□ 0.62
SFN-201ENST00000339276 FAM20AQ96MK3 541 aa18.91■□□□□ 0.62
SFN-201ENST00000339276 TMEM60Q9H2L4 133 aa18.91■□□□□ 0.62
SFN-201ENST00000339276 ELP1O95163 1332 aa18.91■□□□□ 0.62
SFN-201ENST00000339276 TBX3O15119 743 aa18.9■□□□□ 0.62
SFN-201ENST00000339276 CHMP2AO43633 222 aa18.9■□□□□ 0.62
SFN-201ENST00000339276 CABYRO75952 493 aa18.9■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms