RNA–Protein interactions for RNA: ENST00000338700.9

TRIM2-201, Transcript of tripartite motif containing 2, humanhuman

TSL 1 (best) BASIC

Gene TRIM2, Length 6,735 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM2-201ENST00000338700 SH3GLB2Q9NR46 395 aa8.4□□□□□ -1.06
TRIM2-201ENST00000338700 CNTNAP4Q9C0A0 1308 aa8.4□□□□□ -1.06
TRIM2-201ENST00000338700 FAM170AA1A519 330 aa8.4□□□□□ -1.06
TRIM2-201ENST00000338700 NDUFAB1O14561 156 aa8.4□□□□□ -1.06
TRIM2-201ENST00000338700 TCP1P17987 556 aaKnown RBP8.4□□□□□ -1.06
TRIM2-201ENST00000338700 U2AF2P26368 475 aaKnown RBP eCLIP8.4□□□□□ -1.06
TRIM2-201ENST00000338700 EEF1GP26641 437 aaKnown RBP8.4□□□□□ -1.06
TRIM2-201ENST00000338700 GARSP41250 739 aaKnown RBP8.4□□□□□ -1.06
TRIM2-201ENST00000338700 MYO1EQ12965 1108 aa8.4□□□□□ -1.06
TRIM2-201ENST00000338700 NAA25Q14CX7 972 aa8.4□□□□□ -1.06
TRIM2-201ENST00000338700 KIAA1841Q6NSI8 718 aa8.4□□□□□ -1.06
TRIM2-201ENST00000338700 ELMSAN1Q6PJG2 1045 aa8.4□□□□□ -1.06
TRIM2-201ENST00000338700 TSC1Q92574 1164 aa8.4□□□□□ -1.06
TRIM2-201ENST00000338700 HAUS4Q9H6D7 363 aa8.4□□□□□ -1.06
TRIM2-201ENST00000338700 ZSWIM5Q9P217 1185 aa8.4□□□□□ -1.06
TRIM2-201ENST00000338700 NEXMIFQ5QGS0 1516 aa8.4□□□□□ -1.06
TRIM2-201ENST00000338700 SRGAP2BP0DMP2 458 aa8.4□□□□□ -1.06
TRIM2-201ENST00000338700 ATF2P15336 505 aa8.4□□□□□ -1.06
TRIM2-201ENST00000338700 PSMD2Q13200 908 aa8.4□□□□□ -1.06
TRIM2-201ENST00000338700 PI16Q6UXB8 463 aa8.4□□□□□ -1.06
TRIM2-201ENST00000338700 RNF207Q6ZRF8 634 aa8.4□□□□□ -1.06
TRIM2-201ENST00000338700 RSRC2Q7L4I2 434 aaKnown RBP8.4□□□□□ -1.06
TRIM2-201ENST00000338700 GPR101Q96P66 508 aaPredicted RBP8.4□□□□□ -1.06
TRIM2-201ENST00000338700 PTPRUQ92729 1446 aa8.4□□□□□ -1.06
TRIM2-201ENST00000338700 NRXN1Q9ULB1 1477 aa8.4□□□□□ -1.06
TRIM2-201ENST00000338700 H7C0C1 242 aa8.4□□□□□ -1.06
TRIM2-201ENST00000338700 RGS16O15492 202 aaPredicted RBP8.4□□□□□ -1.06
TRIM2-201ENST00000338700 IFNAR1P17181 557 aa8.4□□□□□ -1.06
TRIM2-201ENST00000338700 ATP5OP48047 213 aa8.4□□□□□ -1.06
TRIM2-201ENST00000338700 LMNB2Q03252 620 aa8.4□□□□□ -1.06
TRIM2-201ENST00000338700 KRT71Q3SY84 523 aa8.4□□□□□ -1.06
TRIM2-201ENST00000338700 CEP57Q86XR8 500 aa8.4□□□□□ -1.06
TRIM2-201ENST00000338700 RFX6Q8HWS3 928 aa8.4□□□□□ -1.06
TRIM2-201ENST00000338700 MICALL2Q8IY33 904 aa8.4□□□□□ -1.06
TRIM2-201ENST00000338700 GIMAP8Q8ND71 665 aaPredicted RBP8.4□□□□□ -1.06
TRIM2-201ENST00000338700 MCUR1Q96AQ8 359 aa8.4□□□□□ -1.06
TRIM2-201ENST00000338700 DDX41Q9UJV9 622 aaKnown RBP8.4□□□□□ -1.06
TRIM2-201ENST00000338700 CELF2O95319 508 aaKnown RBP8.4□□□□□ -1.07
TRIM2-201ENST00000338700 PDXDC2PQ6P474 469 aa8.4□□□□□ -1.07
TRIM2-201ENST00000338700 SH3RF3Q8TEJ3 882 aaPredicted RBP8.4□□□□□ -1.07
TRIM2-201ENST00000338700 TCP11Q8WWU5 503 aa8.4□□□□□ -1.07
TRIM2-201ENST00000338700 FEM1BQ9UK73 627 aa8.4□□□□□ -1.07
TRIM2-201ENST00000338700 RICTORQ6R327 1708 aa8.4□□□□□ -1.07
TRIM2-201ENST00000338700 XPAP23025 273 aaPredicted RBP8.4□□□□□ -1.07
TRIM2-201ENST00000338700 GBP1P32455 592 aa8.4□□□□□ -1.07
TRIM2-201ENST00000338700 ELF2Q15723 593 aa8.4□□□□□ -1.07
TRIM2-201ENST00000338700 UBE2SQ16763 222 aa8.4□□□□□ -1.07
TRIM2-201ENST00000338700 MFSD14CQ5VZR4 134 aa8.4□□□□□ -1.07
TRIM2-201ENST00000338700 EEPD1Q7L9B9 569 aa8.4□□□□□ -1.07
TRIM2-201ENST00000338700 VSIG1Q86XK7 387 aa8.4□□□□□ -1.07
TRIM2-201ENST00000338700 RASEFQ8IZ41 740 aa8.4□□□□□ -1.07
TRIM2-201ENST00000338700 WRNIP1Q96S55 665 aa8.4□□□□□ -1.07
TRIM2-201ENST00000338700 ZFYVE28Q9HCC9 887 aa8.4□□□□□ -1.07
TRIM2-201ENST00000338700 FBXO40Q9UH90 709 aa8.4□□□□□ -1.07
TRIM2-201ENST00000338700 PPP2R2CQ9Y2T4 447 aa8.4□□□□□ -1.07
TRIM2-201ENST00000338700 CD163L1Q9NR16 1453 aa8.39□□□□□ -1.07
TRIM2-201ENST00000338700 LIFRP42702 1097 aa8.39□□□□□ -1.07
TRIM2-201ENST00000338700 KIF23Q02241 960 aaPredicted RBP8.39□□□□□ -1.07
TRIM2-201ENST00000338700 SEPT6Q14141 434 aa8.39□□□□□ -1.07
TRIM2-201ENST00000338700 KAZNQ674X7 775 aa8.39□□□□□ -1.07
TRIM2-201ENST00000338700 FASTKD5Q7L8L6 764 aaKnown RBP8.39□□□□□ -1.07
TRIM2-201ENST00000338700 COL23A1Q86Y22 540 aaPredicted RBP8.39□□□□□ -1.07
TRIM2-201ENST00000338700 CACNA2D3Q8IZS8 1091 aa8.39□□□□□ -1.07
TRIM2-201ENST00000338700 PARVGQ9HBI0 331 aa8.39□□□□□ -1.07
TRIM2-201ENST00000338700 HOXC10Q9NYD6 342 aa8.39□□□□□ -1.07
TRIM2-201ENST00000338700 ANAPC5Q9UJX4 755 aa8.39□□□□□ -1.07
TRIM2-201ENST00000338700 MYO1FO00160 1098 aa8.39□□□□□ -1.07
TRIM2-201ENST00000338700 SASH1O94885 1247 aa8.39□□□□□ -1.07
TRIM2-201ENST00000338700 MYL3P08590 195 aa8.39□□□□□ -1.07
TRIM2-201ENST00000338700 TROVE2P10155 538 aaKnown RBP eCLIP8.39□□□□□ -1.07
TRIM2-201ENST00000338700 VEGFAP15692 232 aaPredicted RBP8.39□□□□□ -1.07
TRIM2-201ENST00000338700 MAP2K2P36507 400 aa8.39□□□□□ -1.07
TRIM2-201ENST00000338700 AP3B2Q13367 1082 aa8.39□□□□□ -1.07
TRIM2-201ENST00000338700 RPS6KA2Q15349 733 aa8.39□□□□□ -1.07
TRIM2-201ENST00000338700 CCDC13Q8IYE1 715 aa8.39□□□□□ -1.07
TRIM2-201ENST00000338700 RRAGCQ9HB90 399 aa8.39□□□□□ -1.07
TRIM2-201ENST00000338700 CDHR2Q9BYE9 1310 aa8.39□□□□□ -1.07
TRIM2-201ENST00000338700 MEIS1O00470 390 aa8.39□□□□□ -1.07
TRIM2-201ENST00000338700 ANXA13P27216 316 aa8.39□□□□□ -1.07
TRIM2-201ENST00000338700 CTNNA1P35221 906 aaKnown RBP8.39□□□□□ -1.07
TRIM2-201ENST00000338700 JAK3P52333 1124 aa8.39□□□□□ -1.07
TRIM2-201ENST00000338700 TFAMQ00059 246 aaKnown RBP8.39□□□□□ -1.07
TRIM2-201ENST00000338700 MAN2A1Q16706 1144 aa8.39□□□□□ -1.07
TRIM2-201ENST00000338700 ZBTB33Q86T24 672 aa8.39□□□□□ -1.07
TRIM2-201ENST00000338700 RNF168Q8IYW5 571 aaPredicted RBP8.39□□□□□ -1.07
TRIM2-201ENST00000338700 SCYL1Q96KG9 808 aa8.39□□□□□ -1.07
TRIM2-201ENST00000338700 TRIM56Q9BRZ2 755 aaKnown RBP8.39□□□□□ -1.07
TRIM2-201ENST00000338700 SLC38A10Q9HBR0 1119 aa8.39□□□□□ -1.07
TRIM2-201ENST00000338700 LRRIQ1Q96JM4 1722 aa8.39□□□□□ -1.07
TRIM2-201ENST00000338700 CYP2D7A0A087X1C5 515 aa8.39□□□□□ -1.07
TRIM2-201ENST00000338700 GNAT1P11488 350 aa8.39□□□□□ -1.07
TRIM2-201ENST00000338700 DGKHQ86XP1 1220 aa8.39□□□□□ -1.07
TRIM2-201ENST00000338700 CDKL2Q92772 493 aa8.39□□□□□ -1.07
TRIM2-201ENST00000338700 MRFAP1L1Q96HT8 127 aa8.39□□□□□ -1.07
TRIM2-201ENST00000338700 RILPQ96NA2 401 aa8.39□□□□□ -1.07
TRIM2-201ENST00000338700 ZNF148Q9UQR1 794 aa8.39□□□□□ -1.07
TRIM2-201ENST00000338700 PASKQ96RG2 1323 aa8.39□□□□□ -1.07
TRIM2-201ENST00000338700 GH2P01242 217 aa8.39□□□□□ -1.07
TRIM2-201ENST00000338700 STX2P32856 288 aa8.39□□□□□ -1.07
TRIM2-201ENST00000338700 C4orf50Q6ZRC1 276 aa8.39□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms