RNA–Protein interactions for RNA: ENST00000338427.10

NUDCD3-201, Transcript of NudC domain containing 3, humanhuman

TSL 3

Gene NUDCD3, Length 779 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD3-201ENST00000338427 PTK7Q13308 1070 aa15.39■□□□□ 0.05
NUDCD3-201ENST00000338427 PPP2R2DQ66LE6 453 aa15.39■□□□□ 0.05
NUDCD3-201ENST00000338427 KRT40Q6A162 431 aa15.39■□□□□ 0.05
NUDCD3-201ENST00000338427 TYW1BQ6NUM6 668 aa15.39■□□□□ 0.05
NUDCD3-201ENST00000338427 TMTC3Q6ZXV5 915 aa15.39■□□□□ 0.05
NUDCD3-201ENST00000338427 CAGE1Q8TC20 777 aa15.39■□□□□ 0.05
NUDCD3-201ENST00000338427 AFAP1L1Q8TED9 768 aa15.39■□□□□ 0.05
NUDCD3-201ENST00000338427 PGBD1Q96JS3 809 aa15.39■□□□□ 0.05
NUDCD3-201ENST00000338427 TUT1Q9H6E5 874 aaKnown RBP15.39■□□□□ 0.05
NUDCD3-201ENST00000338427 FAM217BQ9NTX9 383 aaPredicted RBP15.39■□□□□ 0.05
NUDCD3-201ENST00000338427 SETD4Q9NVD3 440 aa15.39■□□□□ 0.05
NUDCD3-201ENST00000338427 V9GY48 417 aaPredicted RBP15.39■□□□□ 0.05
NUDCD3-201ENST00000338427 LCHNA4D1U4 455 aa15.38■□□□□ 0.05
NUDCD3-201ENST00000338427 PIK3CDO00329 1044 aa15.38■□□□□ 0.05
NUDCD3-201ENST00000338427 ADAMTS3O15072 1205 aa15.38■□□□□ 0.05
NUDCD3-201ENST00000338427 SMIM10L2AP0DMW4 78 aa15.38■□□□□ 0.05
NUDCD3-201ENST00000338427 SMIM10L2BP0DMW5 78 aa15.38■□□□□ 0.05
NUDCD3-201ENST00000338427 CALM1P0DP23 149 aa15.38■□□□□ 0.05
NUDCD3-201ENST00000338427 CALM2P0DP24 149 aa15.38■□□□□ 0.05
NUDCD3-201ENST00000338427 CALM3P0DP25 149 aa15.38■□□□□ 0.05
NUDCD3-201ENST00000338427 ITGB5P18084 799 aa15.38■□□□□ 0.05
NUDCD3-201ENST00000338427 CDC27P30260 824 aa15.38■□□□□ 0.05
NUDCD3-201ENST00000338427 FUT2Q10981 343 aa15.38■□□□□ 0.05
NUDCD3-201ENST00000338427 PCNX4Q63HM2 1172 aa15.38■□□□□ 0.05
NUDCD3-201ENST00000338427 FAM117BQ6P1L5 589 aa15.38■□□□□ 0.05
NUDCD3-201ENST00000338427 APOA5Q6Q788 366 aa15.38■□□□□ 0.05
NUDCD3-201ENST00000338427 DHX32Q7L7V1 743 aaKnown RBP15.38■□□□□ 0.05
NUDCD3-201ENST00000338427 HEATR3Q7Z4Q2 680 aa15.38■□□□□ 0.05
NUDCD3-201ENST00000338427 SGMS1Q86VZ5 419 aa15.38■□□□□ 0.05
NUDCD3-201ENST00000338427 HERC6Q8IVU3 1022 aa15.38■□□□□ 0.05
NUDCD3-201ENST00000338427 KATNAL1Q9BW62 490 aa15.38■□□□□ 0.05
NUDCD3-201ENST00000338427 PCDHA6Q9UN73 950 aa15.38■□□□□ 0.05
NUDCD3-201ENST00000338427 PCDHA8Q9Y5H6 950 aa15.38■□□□□ 0.05
NUDCD3-201ENST00000338427 C17orf102A2RUQ5 167 aa15.37■□□□□ 0.05
NUDCD3-201ENST00000338427 NOP56O00567 594 aaKnown RBP15.37■□□□□ 0.05
NUDCD3-201ENST00000338427 FIBPO43427 364 aa15.37■□□□□ 0.05
NUDCD3-201ENST00000338427 CDC45O75419 566 aa15.37■□□□□ 0.05
NUDCD3-201ENST00000338427 THPOP40225 353 aa15.37■□□□□ 0.05
NUDCD3-201ENST00000338427 WDR5P61964 334 aaKnown RBP15.37■□□□□ 0.05
NUDCD3-201ENST00000338427 NEDD9Q14511 834 aa15.37■□□□□ 0.05
NUDCD3-201ENST00000338427 GNPTABQ3T906 1256 aa15.37■□□□□ 0.05
NUDCD3-201ENST00000338427 WWC2Q6AWC2 1192 aa15.37■□□□□ 0.05
NUDCD3-201ENST00000338427 METTL7BQ6UX53 244 aa15.37■□□□□ 0.05
NUDCD3-201ENST00000338427 SYNE3Q6ZMZ3 975 aa15.37■□□□□ 0.05
NUDCD3-201ENST00000338427 LIN28BQ6ZN17 250 aaKnown RBP eCLIP15.37■□□□□ 0.05
NUDCD3-201ENST00000338427 MICALL1Q8N3F8 863 aa15.37■□□□□ 0.05
NUDCD3-201ENST00000338427 CCDC155Q8N6L0 562 aa15.37■□□□□ 0.05
NUDCD3-201ENST00000338427 CYP2W1Q8TAV3 490 aa15.37■□□□□ 0.05
NUDCD3-201ENST00000338427 ATP6V0A1Q93050 837 aa15.37■□□□□ 0.05
NUDCD3-201ENST00000338427 GSTTP1A0A1W2PQM5 241 aa15.36■□□□□ 0.05
NUDCD3-201ENST00000338427 CXCL10P02778 98 aa15.36■□□□□ 0.05
NUDCD3-201ENST00000338427 ADD1P35611 737 aaKnown RBP15.36■□□□□ 0.05
NUDCD3-201ENST00000338427 TAP1Q03518 808 aa15.36■□□□□ 0.05
NUDCD3-201ENST00000338427 RBL2Q08999 1139 aa15.36■□□□□ 0.05
NUDCD3-201ENST00000338427 TSGA10IPQ3SY00 556 aa15.36■□□□□ 0.05
NUDCD3-201ENST00000338427 RNF20Q5VTR2 975 aa15.36■□□□□ 0.05
NUDCD3-201ENST00000338427 NLRX1Q86UT6 975 aa15.36■□□□□ 0.05
NUDCD3-201ENST00000338427 SERINC5Q86VE9 423 aa15.36■□□□□ 0.05
NUDCD3-201ENST00000338427 DBF4BQ8NFT6 615 aa15.36■□□□□ 0.05
NUDCD3-201ENST00000338427 ARNTL2Q8WYA1 636 aa15.36■□□□□ 0.05
NUDCD3-201ENST00000338427 ZBTB10Q96DT7 871 aa15.36■□□□□ 0.05
NUDCD3-201ENST00000338427 UIMC1Q96RL1 719 aa15.36■□□□□ 0.05
NUDCD3-201ENST00000338427 TMEM260Q9NX78 707 aa15.36■□□□□ 0.05
NUDCD3-201ENST00000338427 NAP1L2Q9ULW6 460 aaPredicted RBP15.36■□□□□ 0.05
NUDCD3-201ENST00000338427 UBIAD1Q9Y5Z9 338 aa15.36■□□□□ 0.05
NUDCD3-201ENST00000338427 KLF18A0A0U1RQI7 1052 aa15.35■□□□□ 0.05
NUDCD3-201ENST00000338427 RSPH10B2B2RC85 870 aa15.35■□□□□ 0.05
NUDCD3-201ENST00000338427 ZBTB43O43298 467 aa15.35■□□□□ 0.05
NUDCD3-201ENST00000338427 PPFIA3O75145 1194 aa15.35■□□□□ 0.05
NUDCD3-201ENST00000338427 STAM2O75886 525 aa15.35■□□□□ 0.05
NUDCD3-201ENST00000338427 CTSHP09668 335 aa15.35■□□□□ 0.05
NUDCD3-201ENST00000338427 RSPH10BP0C881 870 aa15.35■□□□□ 0.05
NUDCD3-201ENST00000338427 KCNA2P16389 499 aa15.35■□□□□ 0.05
NUDCD3-201ENST00000338427 APOBRQ0VD83 1088 aa15.35■□□□□ 0.05
NUDCD3-201ENST00000338427 RTN1Q16799 776 aa15.35■□□□□ 0.05
NUDCD3-201ENST00000338427 CNKSR3Q6P9H4 555 aa15.35■□□□□ 0.05
NUDCD3-201ENST00000338427 PHOSPHO2Q8TCD6 241 aa15.35■□□□□ 0.05
NUDCD3-201ENST00000338427 CCDC136Q96JN2 1154 aa15.35■□□□□ 0.05
NUDCD3-201ENST00000338427 SLC9A7Q96T83 725 aa15.35■□□□□ 0.05
NUDCD3-201ENST00000338427 USP26Q9BXU7 913 aa15.35■□□□□ 0.05
NUDCD3-201ENST00000338427 CNTNAP5Q8WYK1 1306 aa15.35■□□□□ 0.05
NUDCD3-201ENST00000338427 VCANP13611 3396 aa15.35■□□□□ 0.05
NUDCD3-201ENST00000338427 TLL1O43897 1013 aa15.34■□□□□ 0.05
NUDCD3-201ENST00000338427 ARP10275 920 aa15.34■□□□□ 0.05
NUDCD3-201ENST00000338427 KCNJ6P48051 423 aa15.34■□□□□ 0.05
NUDCD3-201ENST00000338427 XRRA1Q6P2D8 792 aa15.34■□□□□ 0.05
NUDCD3-201ENST00000338427 Q6ZUG5 572 aa15.34■□□□□ 0.05
NUDCD3-201ENST00000338427 SENP7Q9BQF6 1050 aa15.34■□□□□ 0.05
NUDCD3-201ENST00000338427 ZBED2Q9BTP6 218 aa15.34■□□□□ 0.05
NUDCD3-201ENST00000338427 JADE2Q9NQC1 790 aa15.34■□□□□ 0.05
NUDCD3-201ENST00000338427 SNX14Q9Y5W7 946 aa15.34■□□□□ 0.05
NUDCD3-201ENST00000338427 PTPRSQ13332 1948 aa15.34■□□□□ 0.05
NUDCD3-201ENST00000338427 REV3LO60673 3130 aa15.34■□□□□ 0.05
NUDCD3-201ENST00000338427 SMCO2A6NFE2 343 aa15.33■□□□□ 0.04
NUDCD3-201ENST00000338427 SPDYE3A6NKU9 549 aa15.33■□□□□ 0.04
NUDCD3-201ENST00000338427 GOLGA8AA7E2F4 631 aa15.33■□□□□ 0.04
NUDCD3-201ENST00000338427 GOLGA8BA8MQT2 603 aa15.33■□□□□ 0.04
NUDCD3-201ENST00000338427 KIF28PB7ZC32 967 aa15.33■□□□□ 0.04
NUDCD3-201ENST00000338427 STXBP3O00186 592 aa15.33■□□□□ 0.04
NUDCD3-201ENST00000338427 LGR5O75473 907 aa15.33■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms