RNA–Protein interactions for RNA: ENST00000337841.4

SPTLC1-202, Transcript of serine palmitoyltransferase long chain base subunit 1, humanhuman

TSL 1 (best) BASIC

Gene SPTLC1, Length 946 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1-202ENST00000337841 KCNA2P16389 499 aa13.49□□□□□ -0.25
SPTLC1-202ENST00000337841 EN2P19622 333 aaPredicted RBP13.49□□□□□ -0.25
SPTLC1-202ENST00000337841 UBA1P22314 1058 aaKnown RBP13.49□□□□□ -0.25
SPTLC1-202ENST00000337841 ARHGAP1Q07960 439 aa13.49□□□□□ -0.25
SPTLC1-202ENST00000337841 ORC2Q13416 577 aaPredicted RBP13.49□□□□□ -0.25
SPTLC1-202ENST00000337841 TTC38Q5R3I4 469 aa13.49□□□□□ -0.25
SPTLC1-202ENST00000337841 METTL7BQ6UX53 244 aa13.49□□□□□ -0.25
SPTLC1-202ENST00000337841 KLHDC9Q8NEP7 349 aa13.49□□□□□ -0.25
SPTLC1-202ENST00000337841 LENG1Q96BZ8 264 aaPredicted RBP13.49□□□□□ -0.25
SPTLC1-202ENST00000337841 FAM20AQ96MK3 541 aa13.49□□□□□ -0.25
SPTLC1-202ENST00000337841 RIT2Q99578 217 aa13.49□□□□□ -0.25
SPTLC1-202ENST00000337841 MTMR6Q9Y217 621 aa13.49□□□□□ -0.25
SPTLC1-202ENST00000337841 POTEFA5A3E0 1075 aa13.48□□□□□ -0.25
SPTLC1-202ENST00000337841 DNM1LO00429 736 aa13.48□□□□□ -0.25
SPTLC1-202ENST00000337841 TBX3O15119 743 aa13.48□□□□□ -0.25
SPTLC1-202ENST00000337841 MSH4O15457 936 aa13.48□□□□□ -0.25
SPTLC1-202ENST00000337841 SORBS3O60504 671 aa13.48□□□□□ -0.25
SPTLC1-202ENST00000337841 ADAMTS4O75173 837 aa13.48□□□□□ -0.25
SPTLC1-202ENST00000337841 CST5P28325 142 aaPredicted RBP13.48□□□□□ -0.25
SPTLC1-202ENST00000337841 MCM7P33993 719 aa13.48□□□□□ -0.25
SPTLC1-202ENST00000337841 ZNF174Q15697 407 aa13.48□□□□□ -0.25
SPTLC1-202ENST00000337841 KCNA10Q16322 511 aa13.48□□□□□ -0.25
SPTLC1-202ENST00000337841 FERMT3Q86UX7 667 aa13.48□□□□□ -0.25
SPTLC1-202ENST00000337841 PPTC7Q8NI37 304 aa13.48□□□□□ -0.25
SPTLC1-202ENST00000337841 AFG1LQ8WV93 481 aa13.48□□□□□ -0.25
SPTLC1-202ENST00000337841 SEPT1Q8WYJ6 367 aa13.48□□□□□ -0.25
SPTLC1-202ENST00000337841 VTI1AQ96AJ9 217 aa13.48□□□□□ -0.25
SPTLC1-202ENST00000337841 TSHZ2Q9NRE2 1034 aa13.48□□□□□ -0.25
SPTLC1-202ENST00000337841 POLR3EQ9NVU0 708 aa13.48□□□□□ -0.25
SPTLC1-202ENST00000337841 SLC9A2Q9UBY0 812 aa13.48□□□□□ -0.25
SPTLC1-202ENST00000337841 RBM19Q9Y4C8 960 aaKnown RBP13.48□□□□□ -0.25
SPTLC1-202ENST00000337841 PLXNA1Q9UIW2 1896 aa13.48□□□□□ -0.25
SPTLC1-202ENST00000337841 MOXD2PA6NHM9 499 aa13.47□□□□□ -0.25
SPTLC1-202ENST00000337841 GAS7O60861 476 aa13.47□□□□□ -0.25
SPTLC1-202ENST00000337841 CABYRO75952 493 aa13.47□□□□□ -0.25
SPTLC1-202ENST00000337841 FARP2O94887 1054 aaPredicted RBP13.47□□□□□ -0.25
SPTLC1-202ENST00000337841 MYL3P08590 195 aa13.47□□□□□ -0.25
SPTLC1-202ENST00000337841 ZSCAN22P10073 491 aaPredicted RBP13.47□□□□□ -0.25
SPTLC1-202ENST00000337841 SOX10P56693 466 aa13.47□□□□□ -0.25
SPTLC1-202ENST00000337841 BEX3Q00994 111 aa13.47□□□□□ -0.25
SPTLC1-202ENST00000337841 CALCRLQ16602 461 aa13.47□□□□□ -0.25
SPTLC1-202ENST00000337841 DGKDQ16760 1214 aa13.47□□□□□ -0.25
SPTLC1-202ENST00000337841 SLFN12Q8IYM2 578 aa13.47□□□□□ -0.25
SPTLC1-202ENST00000337841 SLC5A5Q92911 643 aa13.47□□□□□ -0.25
SPTLC1-202ENST00000337841 LENG9Q96B70 501 aa13.47□□□□□ -0.25
SPTLC1-202ENST00000337841 UIMC1Q96RL1 719 aa13.47□□□□□ -0.25
SPTLC1-202ENST00000337841 TEKT3Q9BXF9 490 aa13.47□□□□□ -0.25
SPTLC1-202ENST00000337841 JPH1Q9HDC5 661 aaPredicted RBP13.47□□□□□ -0.25
SPTLC1-202ENST00000337841 CTAGE5O15320 804 aa13.46□□□□□ -0.25
SPTLC1-202ENST00000337841 DHX15O43143 795 aaKnown RBP13.46□□□□□ -0.25
SPTLC1-202ENST00000337841 SLC37A4O43826 429 aa13.46□□□□□ -0.25
SPTLC1-202ENST00000337841 NEMFO60524 1076 aa13.46□□□□□ -0.25
SPTLC1-202ENST00000337841 ASGR1P07306 291 aa13.46□□□□□ -0.25
SPTLC1-202ENST00000337841 PTGS1P23219 599 aa13.46□□□□□ -0.25
SPTLC1-202ENST00000337841 TOB1P50616 345 aaPredicted RBP13.46□□□□□ -0.25
SPTLC1-202ENST00000337841 ACLYP53396 1101 aa13.46□□□□□ -0.25
SPTLC1-202ENST00000337841 KRT76Q01546 638 aa13.46□□□□□ -0.25
SPTLC1-202ENST00000337841 SP4Q02446 784 aa13.46□□□□□ -0.25
SPTLC1-202ENST00000337841 RESTQ13127 1097 aa13.46□□□□□ -0.25
SPTLC1-202ENST00000337841 ITGB3BPQ13352 177 aaPredicted RBP13.46□□□□□ -0.25
SPTLC1-202ENST00000337841 HSDL1Q3SXM5 330 aa13.46□□□□□ -0.25
SPTLC1-202ENST00000337841 LRCH2Q5VUJ6 765 aa13.46□□□□□ -0.25
SPTLC1-202ENST00000337841 NECAB2Q7Z6G3 386 aa13.46□□□□□ -0.25
SPTLC1-202ENST00000337841 BCAS3Q9H6U6 928 aa13.46□□□□□ -0.25
SPTLC1-202ENST00000337841 PHF24Q9UPV7 400 aa13.46□□□□□ -0.25
SPTLC1-202ENST00000337841 MYADML2A6NDP7 307 aa13.45□□□□□ -0.26
SPTLC1-202ENST00000337841 DDX39AO00148 427 aaKnown RBP13.45□□□□□ -0.26
SPTLC1-202ENST00000337841 BMP15O95972 392 aa13.45□□□□□ -0.26
SPTLC1-202ENST00000337841 MMP3P08254 477 aa13.45□□□□□ -0.26
SPTLC1-202ENST00000337841 ACTR2P61160 394 aa13.45□□□□□ -0.26
SPTLC1-202ENST00000337841 IRX5P78411 483 aaPredicted RBP13.45□□□□□ -0.26
SPTLC1-202ENST00000337841 NUCB2P80303 420 aa13.45□□□□□ -0.26
SPTLC1-202ENST00000337841 FOXD4L5Q5VV16 416 aaPredicted RBP13.45□□□□□ -0.26
SPTLC1-202ENST00000337841 CCSAPQ6IQ19 270 aaPredicted RBP13.45□□□□□ -0.26
SPTLC1-202ENST00000337841 ZNF746Q6NUN9 644 aaPredicted RBP13.45□□□□□ -0.26
SPTLC1-202ENST00000337841 MIS18BP1Q6P0N0 1132 aa13.45□□□□□ -0.26
SPTLC1-202ENST00000337841 ETNPPLQ8TBG4 499 aa13.45□□□□□ -0.26
SPTLC1-202ENST00000337841 FOXD4L4Q8WXT5 416 aaPredicted RBP13.45□□□□□ -0.26
SPTLC1-202ENST00000337841 PAWRQ96IZ0 340 aaKnown RBP13.45□□□□□ -0.26
SPTLC1-202ENST00000337841 GLT1D1Q96MS3 346 aa13.45□□□□□ -0.26
SPTLC1-202ENST00000337841 ZNF396Q96N95 335 aaPredicted RBP13.45□□□□□ -0.26
SPTLC1-202ENST00000337841 GPR20Q99678 358 aa13.45□□□□□ -0.26
SPTLC1-202ENST00000337841 MTG1Q9BT17 334 aaPredicted RBP13.45□□□□□ -0.26
SPTLC1-202ENST00000337841 SENP6Q9GZR1 1112 aaPredicted RBP13.45□□□□□ -0.26
SPTLC1-202ENST00000337841 C11orf49Q9H6J7 331 aa13.45□□□□□ -0.26
SPTLC1-202ENST00000337841 KCNMB3Q9NPA1 279 aa13.45□□□□□ -0.26
SPTLC1-202ENST00000337841 PCDHA12Q9UN75 941 aa13.45□□□□□ -0.26
SPTLC1-202ENST00000337841 CEP131Q9UPN4 1083 aa13.45□□□□□ -0.26
SPTLC1-202ENST00000337841 PCDHB6Q9Y5E3 794 aa13.45□□□□□ -0.26
SPTLC1-202ENST00000337841 RBBP6Q7Z6E9 1792 aaKnown RBP13.45□□□□□ -0.26
SPTLC1-202ENST00000337841 LCTP09848 1927 aa13.45□□□□□ -0.26
SPTLC1-202ENST00000337841 GSTTP1A0A1W2PQM5 241 aa13.44□□□□□ -0.26
SPTLC1-202ENST00000337841 LAD1O00515 517 aa13.44□□□□□ -0.26
SPTLC1-202ENST00000337841 PSMD10O75832 226 aa13.44□□□□□ -0.26
SPTLC1-202ENST00000337841 PSAPP07602 524 aa13.44□□□□□ -0.26
SPTLC1-202ENST00000337841 SFNP31947 248 aa13.44□□□□□ -0.26
SPTLC1-202ENST00000337841 TXKP42681 527 aa13.44□□□□□ -0.26
SPTLC1-202ENST00000337841 PTGDRQ13258 359 aa13.44□□□□□ -0.26
SPTLC1-202ENST00000337841 UTP14CQ5TAP6 766 aaKnown RBP13.44□□□□□ -0.26
SPTLC1-202ENST00000337841 CXCL17Q6UXB2 119 aa13.44□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms