RNA–Protein interactions for RNA: ENST00000337620.8

CBX3-201, Transcript of chromobox 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CBX3, Length 2,128 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3-201ENST00000337620 EFCC1Q9HA90 598 aa16.48■□□□□ 0.23
CBX3-201ENST00000337620 BLOC1S4Q9NUP1 217 aa16.48■□□□□ 0.23
CBX3-201ENST00000337620 STK24Q9Y6E0 443 aa16.48■□□□□ 0.23
CBX3-201ENST00000337620 MANSC4A6NHS7 340 aaPredicted RBP16.47■□□□□ 0.23
CBX3-201ENST00000337620 PGK2P07205 417 aa16.47■□□□□ 0.23
CBX3-201ENST00000337620 MCM6Q14566 821 aa16.47■□□□□ 0.23
CBX3-201ENST00000337620 HYIQ5T013 277 aa16.47■□□□□ 0.23
CBX3-201ENST00000337620 KCNK18Q7Z418 384 aa16.47■□□□□ 0.23
CBX3-201ENST00000337620 CATSPER3Q86XQ3 398 aa16.47■□□□□ 0.23
CBX3-201ENST00000337620 LARP4BQ92615 738 aaKnown RBP16.47■□□□□ 0.23
CBX3-201ENST00000337620 RAD54LQ92698 747 aa16.47■□□□□ 0.23
CBX3-201ENST00000337620 GSDMAQ96QA5 445 aa16.47■□□□□ 0.23
CBX3-201ENST00000337620 EIF2AK1Q9BQI3 630 aaKnown RBP16.47■□□□□ 0.23
CBX3-201ENST00000337620 UNC45AQ9H3U1 944 aa16.47■□□□□ 0.23
CBX3-201ENST00000337620 ADD3Q9UEY8 706 aaKnown RBP16.47■□□□□ 0.23
CBX3-201ENST00000337620 TLL2Q9Y6L7 1015 aa16.47■□□□□ 0.23
CBX3-201ENST00000337620 ASTN1O14525 1302 aa16.47■□□□□ 0.23
CBX3-201ENST00000337620 FCER1AP12319 257 aa16.46■□□□□ 0.23
CBX3-201ENST00000337620 RPA1P27694 616 aa16.46■□□□□ 0.23
CBX3-201ENST00000337620 ALDH5A1P51649 535 aaPredicted RBP16.46■□□□□ 0.23
CBX3-201ENST00000337620 AMPD3Q01432 767 aa16.46■□□□□ 0.23
CBX3-201ENST00000337620 CYP4A11Q02928 519 aa16.46■□□□□ 0.23
CBX3-201ENST00000337620 ITGB3BPQ13352 177 aaPredicted RBP16.46■□□□□ 0.23
CBX3-201ENST00000337620 STXBP2Q15833 593 aa16.46■□□□□ 0.23
CBX3-201ENST00000337620 SHCBP1Q8NEM2 672 aa16.46■□□□□ 0.23
CBX3-201ENST00000337620 POTEFA5A3E0 1075 aa16.46■□□□□ 0.23
CBX3-201ENST00000337620 SOWAHBA6NEL2 793 aa16.46■□□□□ 0.23
CBX3-201ENST00000337620 E9PMD0 336 aa16.46■□□□□ 0.23
CBX3-201ENST00000337620 SLC26A4O43511 780 aa16.46■□□□□ 0.23
CBX3-201ENST00000337620 ATP9AO75110 1047 aa16.46■□□□□ 0.23
CBX3-201ENST00000337620 BMP6P22004 513 aa16.46■□□□□ 0.23
CBX3-201ENST00000337620 FSTL1Q12841 308 aa16.46■□□□□ 0.23
CBX3-201ENST00000337620 MORC3Q14149 939 aa16.46■□□□□ 0.23
CBX3-201ENST00000337620 POTEGQ6S5H5 508 aa16.46■□□□□ 0.23
CBX3-201ENST00000337620 FAM133AQ8N9E0 248 aa16.46■□□□□ 0.23
CBX3-201ENST00000337620 TRIML1Q8N9V2 468 aa16.46■□□□□ 0.23
CBX3-201ENST00000337620 GPRASP2Q96D09 838 aa16.46■□□□□ 0.23
CBX3-201ENST00000337620 INPP4AQ96PE3 977 aaPredicted RBP16.46■□□□□ 0.23
CBX3-201ENST00000337620 TBC1D22BQ9NU19 505 aa16.46■□□□□ 0.23
CBX3-201ENST00000337620 RGL1Q9NZL6 768 aa16.46■□□□□ 0.23
CBX3-201ENST00000337620 LCTP09848 1927 aa16.45■□□□□ 0.22
CBX3-201ENST00000337620 DHX15O43143 795 aaKnown RBP16.45■□□□□ 0.22
CBX3-201ENST00000337620 STAM2O75886 525 aa16.45■□□□□ 0.22
CBX3-201ENST00000337620 RPN1P04843 607 aaKnown RBP16.45■□□□□ 0.22
CBX3-201ENST00000337620 MYL1P05976 194 aa16.45■□□□□ 0.22
CBX3-201ENST00000337620 SLC10A3P09131 477 aa16.45■□□□□ 0.22
CBX3-201ENST00000337620 SPATA31C1P0DKV0 1188 aa16.45■□□□□ 0.22
CBX3-201ENST00000337620 UVSSAQ2YD98 709 aa16.45■□□□□ 0.22
CBX3-201ENST00000337620 TMEM88BA6NKF7 163 aa16.45■□□□□ 0.22
CBX3-201ENST00000337620 BECN2A8MW95 431 aa16.45■□□□□ 0.22
CBX3-201ENST00000337620 IGF2BP3O00425 579 aaKnown RBP eCLIP16.45■□□□□ 0.22
CBX3-201ENST00000337620 MAFGO15525 162 aa16.45■□□□□ 0.22
CBX3-201ENST00000337620 RGS20O76081 388 aa16.45■□□□□ 0.22
CBX3-201ENST00000337620 SSBP05455 408 aaKnown RBP eCLIP16.45■□□□□ 0.22
CBX3-201ENST00000337620 GNPTABQ3T906 1256 aa16.45■□□□□ 0.22
CBX3-201ENST00000337620 DHX30Q7L2E3 1194 aaKnown RBP eCLIP16.45■□□□□ 0.22
CBX3-201ENST00000337620 ANP32BQ92688 251 aaKnown RBP16.45■□□□□ 0.22
CBX3-201ENST00000337620 DYDC2Q96IM9 177 aa16.45■□□□□ 0.22
CBX3-201ENST00000337620 POLR3CQ9BUI4 534 aaPredicted RBP16.45■□□□□ 0.22
CBX3-201ENST00000337620 TRIM9Q9C026 710 aa16.45■□□□□ 0.22
CBX3-201ENST00000337620 MORF4L1Q9UBU8 362 aa16.45■□□□□ 0.22
CBX3-201ENST00000337620 EIF3JO75822 258 aaKnown RBP16.44■□□□□ 0.22
CBX3-201ENST00000337620 TOMM70O94826 608 aa16.44■□□□□ 0.22
CBX3-201ENST00000337620 PDE4DQ08499 809 aa16.44■□□□□ 0.22
CBX3-201ENST00000337620 GRM1Q13255 1194 aa16.44■□□□□ 0.22
CBX3-201ENST00000337620 CTTNQ14247 550 aaKnown RBP16.44■□□□□ 0.22
CBX3-201ENST00000337620 IQCB1Q15051 598 aa16.44■□□□□ 0.22
CBX3-201ENST00000337620 B3GNT9Q6UX72 402 aa16.44■□□□□ 0.22
CBX3-201ENST00000337620 MIER3Q7Z3K6 550 aa16.44■□□□□ 0.22
CBX3-201ENST00000337620 TPH2Q8IWU9 490 aa16.44■□□□□ 0.22
CBX3-201ENST00000337620 C7orf25Q9BPX7 421 aa16.44■□□□□ 0.22
CBX3-201ENST00000337620 RMND1Q9NWS8 449 aa16.44■□□□□ 0.22
CBX3-201ENST00000337620 SAMM50Q9Y512 469 aa16.44■□□□□ 0.22
CBX3-201ENST00000337620 SLITRK3O94933 977 aa16.43■□□□□ 0.22
CBX3-201ENST00000337620 ASIC1P78348 528 aa16.43■□□□□ 0.22
CBX3-201ENST00000337620 PLCB2Q00722 1185 aa16.43■□□□□ 0.22
CBX3-201ENST00000337620 SEMA3FQ13275 785 aa16.43■□□□□ 0.22
CBX3-201ENST00000337620 EPHA7Q15375 998 aa16.43■□□□□ 0.22
CBX3-201ENST00000337620 PAXIP1Q6ZW49 1069 aaPredicted RBP16.43■□□□□ 0.22
CBX3-201ENST00000337620 AOPEPQ8N6M6 819 aa16.43■□□□□ 0.22
CBX3-201ENST00000337620 CCDC102AQ96A19 550 aa16.43■□□□□ 0.22
CBX3-201ENST00000337620 CDHR1Q96JP9 859 aa16.43■□□□□ 0.22
CBX3-201ENST00000337620 HSD17B14Q9BPX1 270 aa16.43■□□□□ 0.22
CBX3-201ENST00000337620 DNM3Q9UQ16 869 aa16.43■□□□□ 0.22
CBX3-201ENST00000337620 MYMKA6NI61 221 aa16.43■□□□□ 0.22
CBX3-201ENST00000337620 B4DLN1 442 aa16.43■□□□□ 0.22
CBX3-201ENST00000337620 GOLGA6L19H0YKK7 550 aa16.43■□□□□ 0.22
CBX3-201ENST00000337620 PLA2G4BP0C869 781 aa16.43■□□□□ 0.22
CBX3-201ENST00000337620 PSMC6P62333 389 aa16.43■□□□□ 0.22
CBX3-201ENST00000337620 TAF1CQ15572 869 aaPredicted RBP16.43■□□□□ 0.22
CBX3-201ENST00000337620 SEPT14Q6ZU15 432 aa16.43■□□□□ 0.22
CBX3-201ENST00000337620 DYMQ7RTS9 669 aa16.43■□□□□ 0.22
CBX3-201ENST00000337620 MLKLQ8NB16 471 aa16.43■□□□□ 0.22
CBX3-201ENST00000337620 MPHOSPH6Q99547 160 aaKnown RBP16.43■□□□□ 0.22
CBX3-201ENST00000337620 LRRC27Q9C0I9 530 aa16.43■□□□□ 0.22
CBX3-201ENST00000337620 TUFT1Q9NNX1 390 aa16.43■□□□□ 0.22
CBX3-201ENST00000337620 TCEAL9Q9UHQ7 104 aa16.43■□□□□ 0.22
CBX3-201ENST00000337620 DNAJC25-GNG10A0A024R161 153 aa16.42■□□□□ 0.22
CBX3-201ENST00000337620 FAM155AB1AL88 458 aaPredicted RBP16.42■□□□□ 0.22
CBX3-201ENST00000337620 INHBEP58166 350 aa16.42■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 152.1 ms