RNA–Protein interactions for RNA: ENST00000337526.10

RTN4-202, Transcript of reticulon 4, humanhuman

TSL 1 (best) BASIC

Gene RTN4, Length 4,790 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-202ENST00000337526 YWHAGP61981 247 aaKnown RBP eCLIP14.92□□□□□ -0.02
RTN4-202ENST00000337526 DHX40Q8IX18 779 aaKnown RBP14.92□□□□□ -0.02
RTN4-202ENST00000337526 SYNE4Q8N205 404 aa14.92□□□□□ -0.02
RTN4-202ENST00000337526 KLHL29Q96CT2 875 aa14.92□□□□□ -0.02
RTN4-202ENST00000337526 MIS12Q9H081 205 aa14.92□□□□□ -0.02
RTN4-202ENST00000337526 UBE2TQ9NPD8 197 aaPredicted RBP14.92□□□□□ -0.02
RTN4-202ENST00000337526 PNMA2Q9UL42 364 aa14.92□□□□□ -0.02
RTN4-202ENST00000337526 TRPM1Q7Z4N2 1603 aa14.92□□□□□ -0.02
RTN4-202ENST00000337526 BMP3P12645 472 aa14.92□□□□□ -0.02
RTN4-202ENST00000337526 ACCSQ96QU6 501 aa14.92□□□□□ -0.02
RTN4-202ENST00000337526 BHMT2Q9H2M3 363 aa14.92□□□□□ -0.02
RTN4-202ENST00000337526 BSDC1Q9NW68 430 aaPredicted RBP14.92□□□□□ -0.02
RTN4-202ENST00000337526 FRMD4AQ9P2Q2 1039 aaPredicted RBP14.92□□□□□ -0.02
RTN4-202ENST00000337526 MAD1L1Q9Y6D9 718 aa14.92□□□□□ -0.02
RTN4-202ENST00000337526 GCKP35557 465 aa14.92□□□□□ -0.02
RTN4-202ENST00000337526 PIK3CAP42336 1068 aa14.92□□□□□ -0.02
RTN4-202ENST00000337526 SHC4Q6S5L8 630 aa14.92□□□□□ -0.02
RTN4-202ENST00000337526 SPZ1Q9BXG8 430 aa14.92□□□□□ -0.02
RTN4-202ENST00000337526 NT5C2P49902 561 aa14.92□□□□□ -0.02
RTN4-202ENST00000337526 MXI1P50539 228 aa14.92□□□□□ -0.02
RTN4-202ENST00000337526 SEPT6Q14141 434 aa14.92□□□□□ -0.02
RTN4-202ENST00000337526 E2F5Q15329 346 aa14.92□□□□□ -0.02
RTN4-202ENST00000337526 PFKFB3Q16875 520 aaPredicted RBP14.92□□□□□ -0.02
RTN4-202ENST00000337526 TTBK2Q6IQ55 1244 aa14.92□□□□□ -0.02
RTN4-202ENST00000337526 UNC13DQ70J99 1090 aa14.92□□□□□ -0.02
RTN4-202ENST00000337526 TRIM50Q86XT4 487 aa14.92□□□□□ -0.02
RTN4-202ENST00000337526 ENAHQ8N8S7 591 aaPredicted RBP14.92□□□□□ -0.02
RTN4-202ENST00000337526 EPC1Q9H2F5 836 aa14.92□□□□□ -0.02
RTN4-202ENST00000337526 TMEM206Q9H813 350 aa14.92□□□□□ -0.02
RTN4-202ENST00000337526 SH3GLB2Q9NR46 395 aa14.92□□□□□ -0.02
RTN4-202ENST00000337526 PCDHB4Q9Y5E5 795 aa14.92□□□□□ -0.02
RTN4-202ENST00000337526 RFX7Q2KHR2 1363 aa14.92□□□□□ -0.02
RTN4-202ENST00000337526 ANKRD65E5RJM6 399 aa14.91□□□□□ -0.02
RTN4-202ENST00000337526 H7C0C1 242 aa14.91□□□□□ -0.02
RTN4-202ENST00000337526 ATP5OP48047 213 aa14.91□□□□□ -0.02
RTN4-202ENST00000337526 ATP6V0A1Q93050 837 aa14.91□□□□□ -0.02
RTN4-202ENST00000337526 TRIM11Q96F44 468 aa14.91□□□□□ -0.02
RTN4-202ENST00000337526 GBP5Q96PP8 586 aa14.91□□□□□ -0.02
RTN4-202ENST00000337526 MTA3Q9BTC8 594 aa14.91□□□□□ -0.02
RTN4-202ENST00000337526 CNOT10Q9H9A5 744 aaKnown RBP14.91□□□□□ -0.02
RTN4-202ENST00000337526 EFCC1Q9HA90 598 aa14.91□□□□□ -0.02
RTN4-202ENST00000337526 AS3MTQ9HBK9 375 aa14.91□□□□□ -0.02
RTN4-202ENST00000337526 UBN2Q6ZU65 1347 aa14.91□□□□□ -0.02
RTN4-202ENST00000337526 MED14O60244 1454 aa14.91□□□□□ -0.02
RTN4-202ENST00000337526 ANO9A1A5B4 782 aa14.91□□□□□ -0.02
RTN4-202ENST00000337526 RASGRF2O14827 1237 aa14.91□□□□□ -0.02
RTN4-202ENST00000337526 INHBAP08476 426 aa14.91□□□□□ -0.02
RTN4-202ENST00000337526 SLMAPQ14BN4 828 aa14.91□□□□□ -0.02
RTN4-202ENST00000337526 MAP3K21Q5TCX8 1036 aa14.91□□□□□ -0.02
RTN4-202ENST00000337526 GDF11O95390 407 aa14.91□□□□□ -0.02
RTN4-202ENST00000337526 PPP4R3CPQ6ZMV5 832 aa14.91□□□□□ -0.02
RTN4-202ENST00000337526 ARHGEF18Q6ZSZ5 1173 aa14.91□□□□□ -0.02
RTN4-202ENST00000337526 MAP7D3Q8IWC1 876 aa14.91□□□□□ -0.02
RTN4-202ENST00000337526 NLGN1Q8N2Q7 840 aa14.91□□□□□ -0.02
RTN4-202ENST00000337526 SLC17A8Q8NDX2 589 aa14.91□□□□□ -0.02
RTN4-202ENST00000337526 ADPGKQ9BRR6 497 aa14.91□□□□□ -0.02
RTN4-202ENST00000337526 ANAPC5Q9UJX4 755 aa14.91□□□□□ -0.02
RTN4-202ENST00000337526 AXIN2Q9Y2T1 843 aa14.91□□□□□ -0.02
RTN4-202ENST00000337526 ABCA9Q8IUA7 1624 aa14.91□□□□□ -0.02
RTN4-202ENST00000337526 PNMA6FA0A0J9YX94 578 aa14.9□□□□□ -0.02
RTN4-202ENST00000337526 CCDC188H7C350 402 aa14.9□□□□□ -0.02
RTN4-202ENST00000337526 SGK1O00141 431 aa14.9□□□□□ -0.02
RTN4-202ENST00000337526 APBA3O96018 575 aa14.9□□□□□ -0.02
RTN4-202ENST00000337526 PRR29P0C7W0 189 aa14.9□□□□□ -0.02
RTN4-202ENST00000337526 DDIT3P35638 169 aa14.9□□□□□ -0.02
RTN4-202ENST00000337526 ARHGAP4P98171 946 aa14.9□□□□□ -0.02
RTN4-202ENST00000337526 FAM196AQ6ZSG2 479 aa14.9□□□□□ -0.02
RTN4-202ENST00000337526 STOX1Q6ZVD7 989 aa14.9□□□□□ -0.02
RTN4-202ENST00000337526 PAGR1Q9BTK6 254 aa14.9□□□□□ -0.02
RTN4-202ENST00000337526 HMGB1P1B2RPK0 211 aaPredicted RBP14.9□□□□□ -0.02
RTN4-202ENST00000337526 NSMCE1Q8WV22 266 aa14.9□□□□□ -0.02
RTN4-202ENST00000337526 MYCBPQ99417 103 aaPredicted RBP14.9□□□□□ -0.02
RTN4-202ENST00000337526 RIOK1Q9BRS2 568 aaKnown RBP14.9□□□□□ -0.02
RTN4-202ENST00000337526 NRBP2Q9NSY0 501 aa14.9□□□□□ -0.02
RTN4-202ENST00000337526 TTC26A0AVF1 554 aa14.9□□□□□ -0.02
RTN4-202ENST00000337526 FOXN1O15353 648 aa14.9□□□□□ -0.02
RTN4-202ENST00000337526 PRDX5P30044 214 aa14.9□□□□□ -0.02
RTN4-202ENST00000337526 RCAN1P53805 252 aa14.9□□□□□ -0.02
RTN4-202ENST00000337526 EIF3BP55884 814 aaKnown RBP14.9□□□□□ -0.02
RTN4-202ENST00000337526 IRX4P78413 519 aa14.9□□□□□ -0.02
RTN4-202ENST00000337526 DR1Q01658 176 aa14.9□□□□□ -0.02
RTN4-202ENST00000337526 MYO1CO00159 1063 aa14.9□□□□□ -0.02
RTN4-202ENST00000337526 CAPN9O14815 690 aa14.9□□□□□ -0.02
RTN4-202ENST00000337526 SERPINB2P05120 415 aa14.9□□□□□ -0.02
RTN4-202ENST00000337526 RPSAP08865 295 aaKnown RBP14.9□□□□□ -0.02
RTN4-202ENST00000337526 CYP2D6P10635 497 aa14.9□□□□□ -0.02
RTN4-202ENST00000337526 CUL1Q13616 776 aa14.9□□□□□ -0.02
RTN4-202ENST00000337526 ALX1Q15699 326 aa14.9□□□□□ -0.02
RTN4-202ENST00000337526 SGMS1Q86VZ5 419 aa14.9□□□□□ -0.02
RTN4-202ENST00000337526 SLC7A3Q8WY07 619 aa14.9□□□□□ -0.02
RTN4-202ENST00000337526 KMT5AQ9NQR1 393 aa14.9□□□□□ -0.02
RTN4-202ENST00000337526 TBK1Q9UHD2 729 aa14.9□□□□□ -0.02
RTN4-202ENST00000337526 NCAPD2Q15021 1401 aa14.9□□□□□ -0.02
RTN4-202ENST00000337526 MAP3K4Q9Y6R4 1608 aa14.9□□□□□ -0.02
RTN4-202ENST00000337526 GLE1Q53GS7 698 aaKnown RBP14.89□□□□□ -0.03
RTN4-202ENST00000337526 HIBCHQ6NVY1 386 aaPredicted RBP14.89□□□□□ -0.03
RTN4-202ENST00000337526 CPVLQ9H3G5 476 aa14.89□□□□□ -0.03
RTN4-202ENST00000337526 ZNF408Q9H9D4 720 aa14.89□□□□□ -0.03
RTN4-202ENST00000337526 CLRN2A0PK11 232 aa14.89□□□□□ -0.03
RTN4-202ENST00000337526 FGGP02679 453 aa14.89□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms