RNA–Protein interactions for RNA: ENST00000336648.8

HLCS-201, Transcript of holocarboxylase synthetase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HLCS, Length 6,010 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLCS-201ENST00000336648 PANX2Q96RD6 677 aa14.13□□□□□ -0.15
HLCS-201ENST00000336648 PLEKHA4Q9H4M7 779 aa14.13□□□□□ -0.15
HLCS-201ENST00000336648 CPSF3Q9UKF6 684 aaKnown RBP14.13□□□□□ -0.15
HLCS-201ENST00000336648 RPAP1Q9BWH6 1393 aaPredicted RBP14.12□□□□□ -0.15
HLCS-201ENST00000336648 XDHP47989 1333 aa14.12□□□□□ -0.15
HLCS-201ENST00000336648 IQANK1A0A1B0GTG1 560 aa14.12□□□□□ -0.15
HLCS-201ENST00000336648 KRT1P04264 644 aa14.12□□□□□ -0.15
HLCS-201ENST00000336648 SAT1P21673 171 aa14.12□□□□□ -0.15
HLCS-201ENST00000336648 C6orf118Q5T5N4 469 aa14.12□□□□□ -0.15
HLCS-201ENST00000336648 CNPY4Q8N129 248 aa14.12□□□□□ -0.15
HLCS-201ENST00000336648 SKA2Q8WVK7 121 aaPredicted RBP14.12□□□□□ -0.15
HLCS-201ENST00000336648 EPB41L5Q9HCM4 733 aa14.12□□□□□ -0.15
HLCS-201ENST00000336648 KDM5DQ9BY66 1539 aa14.12□□□□□ -0.15
HLCS-201ENST00000336648 NCKAP5LQ9HCH0 1330 aa14.12□□□□□ -0.15
HLCS-201ENST00000336648 PDE8BO95263 885 aa14.12□□□□□ -0.15
HLCS-201ENST00000336648 PYGBP11216 843 aa14.12□□□□□ -0.15
HLCS-201ENST00000336648 ADCY2Q08462 1091 aa14.12□□□□□ -0.15
HLCS-201ENST00000336648 SCRN1Q12765 414 aa14.12□□□□□ -0.15
HLCS-201ENST00000336648 DPY19L2Q6NUT2 758 aa14.12□□□□□ -0.15
HLCS-201ENST00000336648 RNF169Q8NCN4 708 aa14.12□□□□□ -0.15
HLCS-201ENST00000336648 ZNF577Q9BSK1 485 aa14.12□□□□□ -0.15
HLCS-201ENST00000336648 KMT5AQ9NQR1 393 aa14.12□□□□□ -0.15
HLCS-201ENST00000336648 NDUFB9Q9Y6M9 179 aa14.12□□□□□ -0.15
HLCS-201ENST00000336648 MAP3K15Q6ZN16 1313 aa14.12□□□□□ -0.15
HLCS-201ENST00000336648 IFT88Q13099 833 aa14.12□□□□□ -0.15
HLCS-201ENST00000336648 GLE1Q53GS7 698 aaKnown RBP14.12□□□□□ -0.15
HLCS-201ENST00000336648 PIP4K2CQ8TBX8 421 aa14.12□□□□□ -0.15
HLCS-201ENST00000336648 CLIC6Q96NY7 704 aa14.12□□□□□ -0.15
HLCS-201ENST00000336648 THRAP3Q9Y2W1 955 aaKnown RBP14.12□□□□□ -0.15
HLCS-201ENST00000336648 CCDC159P0C7I6 412 aa14.12□□□□□ -0.15
HLCS-201ENST00000336648 PHKG2P15735 406 aa14.12□□□□□ -0.15
HLCS-201ENST00000336648 CCNE1P24864 410 aa14.12□□□□□ -0.15
HLCS-201ENST00000336648 RSRC2Q7L4I2 434 aaKnown RBP14.12□□□□□ -0.15
HLCS-201ENST00000336648 CARMIL3Q8ND23 1372 aa14.12□□□□□ -0.15
HLCS-201ENST00000336648 CCDC188H7C350 402 aa14.11□□□□□ -0.15
HLCS-201ENST00000336648 ZRANB2O95218 330 aaKnown RBP eCLIP14.11□□□□□ -0.15
HLCS-201ENST00000336648 CHRNDQ07001 517 aa14.11□□□□□ -0.15
HLCS-201ENST00000336648 SNX1Q13596 522 aa14.11□□□□□ -0.15
HLCS-201ENST00000336648 CEP70Q8NHQ1 597 aa14.11□□□□□ -0.15
HLCS-201ENST00000336648 UPF3AQ9H1J1 476 aaKnown RBP14.11□□□□□ -0.15
HLCS-201ENST00000336648 KANSL2Q9H9L4 492 aa14.11□□□□□ -0.15
HLCS-201ENST00000336648 LRRC63Q05C16 580 aa14.11□□□□□ -0.15
HLCS-201ENST00000336648 RCN2Q14257 317 aa14.11□□□□□ -0.15
HLCS-201ENST00000336648 MYOM2P54296 1465 aa14.11□□□□□ -0.15
HLCS-201ENST00000336648 MYO1EQ12965 1108 aa14.11□□□□□ -0.15
HLCS-201ENST00000336648 KLC3Q6P597 504 aa14.11□□□□□ -0.15
HLCS-201ENST00000336648 EMBQ6PCB8 327 aa14.11□□□□□ -0.15
HLCS-201ENST00000336648 RHOT2Q8IXI1 618 aa14.11□□□□□ -0.15
HLCS-201ENST00000336648 TRIML2Q8N7C3 387 aa14.11□□□□□ -0.15
HLCS-201ENST00000336648 PRPF38AQ8NAV1 312 aaKnown RBP14.11□□□□□ -0.15
HLCS-201ENST00000336648 ZNF804BA4D1E1 1349 aa14.11□□□□□ -0.15
HLCS-201ENST00000336648 TMTC4Q5T4D3 741 aa14.11□□□□□ -0.15
HLCS-201ENST00000336648 APOA5Q6Q788 366 aa14.11□□□□□ -0.15
HLCS-201ENST00000336648 ADAT2Q7Z6V5 191 aaKnown RBP14.11□□□□□ -0.15
HLCS-201ENST00000336648 NCAPG2Q86XI2 1143 aa14.11□□□□□ -0.15
HLCS-201ENST00000336648 SDR42E1Q8WUS8 393 aa14.11□□□□□ -0.15
HLCS-201ENST00000336648 MRPL40Q9NQ50 206 aaKnown RBP14.11□□□□□ -0.15
HLCS-201ENST00000336648 SEPT9Q9UHD8 586 aaPredicted RBP14.11□□□□□ -0.15
HLCS-201ENST00000336648 BAG6P46379 1132 aa14.11□□□□□ -0.15
HLCS-201ENST00000336648 NOP14P78316 857 aaKnown RBP14.11□□□□□ -0.15
HLCS-201ENST00000336648 RBL2Q08999 1139 aa14.11□□□□□ -0.15
HLCS-201ENST00000336648 ARMCX2Q7L311 632 aa14.11□□□□□ -0.15
HLCS-201ENST00000336648 DCPSQ96C86 337 aaKnown RBP14.11□□□□□ -0.15
HLCS-201ENST00000336648 RCOR1Q9UKL0 485 aa14.11□□□□□ -0.15
HLCS-201ENST00000336648 PTPRTO14522 1441 aa14.11□□□□□ -0.15
HLCS-201ENST00000336648 CTNND1O60716 968 aaKnown RBP14.1□□□□□ -0.15
HLCS-201ENST00000336648 GYG1P46976 350 aa14.1□□□□□ -0.15
HLCS-201ENST00000336648 NR1H3Q13133 447 aa14.1□□□□□ -0.15
HLCS-201ENST00000336648 TCP11X2Q5H9J9 407 aa14.1□□□□□ -0.15
HLCS-201ENST00000336648 ABI1Q8IZP0 508 aa14.1□□□□□ -0.15
HLCS-201ENST00000336648 TMCO5AQ8N6Q1 288 aa14.1□□□□□ -0.15
HLCS-201ENST00000336648 UHMK1Q8TAS1 419 aaKnown RBP14.1□□□□□ -0.15
HLCS-201ENST00000336648 RASGRF2O14827 1237 aa14.1□□□□□ -0.15
HLCS-201ENST00000336648 OSBPP22059 807 aa14.1□□□□□ -0.15
HLCS-201ENST00000336648 PLTPP55058 493 aa14.1□□□□□ -0.15
HLCS-201ENST00000336648 PDXDC1Q6P996 788 aa14.1□□□□□ -0.15
HLCS-201ENST00000336648 C4orf50Q6ZRC1 276 aa14.1□□□□□ -0.15
HLCS-201ENST00000336648 DNAAF3Q8N9W5 541 aa14.1□□□□□ -0.15
HLCS-201ENST00000336648 GPT2Q8TD30 523 aa14.1□□□□□ -0.15
HLCS-201ENST00000336648 TCP11Q8WWU5 503 aa14.1□□□□□ -0.15
HLCS-201ENST00000336648 GNL3Q9BVP2 549 aaKnown RBP eCLIP14.1□□□□□ -0.15
HLCS-201ENST00000336648 DHX36Q9H2U1 1008 aaKnown RBP14.1□□□□□ -0.15
HLCS-201ENST00000336648 SUFUQ9UMX1 484 aa14.1□□□□□ -0.15
HLCS-201ENST00000336648 PTPN22Q9Y2R2 807 aa14.1□□□□□ -0.15
HLCS-201ENST00000336648 ATP5HO75947 161 aa14.1□□□□□ -0.15
HLCS-201ENST00000336648 CCND2P30279 289 aa14.1□□□□□ -0.15
HLCS-201ENST00000336648 BCAMP50895 628 aa14.1□□□□□ -0.15
HLCS-201ENST00000336648 SKOR1P84550 965 aa14.1□□□□□ -0.15
HLCS-201ENST00000336648 DHX9Q08211 1270 aaKnown RBP14.1□□□□□ -0.15
HLCS-201ENST00000336648 TMED2Q15363 201 aa14.1□□□□□ -0.15
HLCS-201ENST00000336648 ARL6IP4Q66PJ3 421 aaKnown RBP14.1□□□□□ -0.15
HLCS-201ENST00000336648 ZNF189O75820 626 aaPredicted RBP14.1□□□□□ -0.15
HLCS-201ENST00000336648 PRKG1Q13976 671 aa14.1□□□□□ -0.15
HLCS-201ENST00000336648 DARS2Q6PI48 645 aaKnown RBP14.1□□□□□ -0.15
HLCS-201ENST00000336648 CENPUQ71F23 418 aa14.1□□□□□ -0.15
HLCS-201ENST00000336648 NLGN1Q8N2Q7 840 aa14.1□□□□□ -0.15
HLCS-201ENST00000336648 UIMC1Q96RL1 719 aa14.1□□□□□ -0.15
HLCS-201ENST00000336648 POTEB3A0JP26 581 aa14.1□□□□□ -0.15
HLCS-201ENST00000336648 PODXLO00592 558 aa14.1□□□□□ -0.15
HLCS-201ENST00000336648 ART3Q13508 389 aa14.1□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms