RNA–Protein interactions for RNA: ENST00000336520.7

MRPL55-203, Transcript of mitochondrial ribosomal protein L55, humanhuman

APPRIS P1 TSL 2 BASIC

Gene MRPL55, Length 744 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-203ENST00000336520 HDAC6Q9UBN7 1215 aa12.98□□□□□ -0.33
MRPL55-203ENST00000336520 UBIAD1Q9Y5Z9 338 aa12.98□□□□□ -0.33
MRPL55-203ENST00000336520 ESYT2A0FGR8 921 aa12.97□□□□□ -0.33
MRPL55-203ENST00000336520 H3BRB1 525 aa12.97□□□□□ -0.33
MRPL55-203ENST00000336520 HAS3O00219 553 aa12.97□□□□□ -0.33
MRPL55-203ENST00000336520 PITPNM1O00562 1244 aa12.97□□□□□ -0.33
MRPL55-203ENST00000336520 LGALS2P05162 132 aa12.97□□□□□ -0.33
MRPL55-203ENST00000336520 ZNF76P36508 570 aa12.97□□□□□ -0.33
MRPL55-203ENST00000336520 ANAPC15P60006 121 aa12.97□□□□□ -0.33
MRPL55-203ENST00000336520 NTRK3Q16288 839 aa12.97□□□□□ -0.33
MRPL55-203ENST00000336520 PKN1Q16512 942 aa12.97□□□□□ -0.33
MRPL55-203ENST00000336520 UTP14CQ5TAP6 766 aaKnown RBP12.97□□□□□ -0.33
MRPL55-203ENST00000336520 JAKMIP3Q5VZ66 844 aa12.97□□□□□ -0.33
MRPL55-203ENST00000336520 CPLX2Q6PUV4 134 aaKnown RBP12.97□□□□□ -0.33
MRPL55-203ENST00000336520 ZNF365Q70YC5 407 aa12.97□□□□□ -0.33
MRPL55-203ENST00000336520 Q7L0L9 218 aa12.97□□□□□ -0.33
MRPL55-203ENST00000336520 C16orf59Q7L2K0 433 aa12.97□□□□□ -0.33
MRPL55-203ENST00000336520 RPUSD2Q8IZ73 545 aaKnown RBP12.97□□□□□ -0.33
MRPL55-203ENST00000336520 REXO1Q8N1G1 1221 aaKnown RBP12.97□□□□□ -0.33
MRPL55-203ENST00000336520 CCDC148Q8NFR7 591 aa12.97□□□□□ -0.33
MRPL55-203ENST00000336520 ZNF274Q96GC6 653 aaPredicted RBP12.97□□□□□ -0.33
MRPL55-203ENST00000336520 GPR20Q99678 358 aa12.97□□□□□ -0.33
MRPL55-203ENST00000336520 C16orf70Q9BSU1 422 aa12.97□□□□□ -0.33
MRPL55-203ENST00000336520 MTIF3Q9H2K0 278 aaKnown RBP12.97□□□□□ -0.33
MRPL55-203ENST00000336520 TUT1Q9H6E5 874 aaKnown RBP12.97□□□□□ -0.33
MRPL55-203ENST00000336520 JADE2Q9NQC1 790 aa12.97□□□□□ -0.33
MRPL55-203ENST00000336520 GTF2IRD1Q9UHL9 959 aa12.97□□□□□ -0.33
MRPL55-203ENST00000336520 LAMA3Q16787 3333 aa12.97□□□□□ -0.33
MRPL55-203ENST00000336520 DOCK5Q9H7D0 1870 aa12.96□□□□□ -0.33
MRPL55-203ENST00000336520 FGBP02675 491 aa12.96□□□□□ -0.33
MRPL55-203ENST00000336520 KCNA2P16389 499 aa12.96□□□□□ -0.33
MRPL55-203ENST00000336520 GNA11P29992 359 aa12.96□□□□□ -0.33
MRPL55-203ENST00000336520 SREBF1P36956 1147 aa12.96□□□□□ -0.33
MRPL55-203ENST00000336520 SMAD3P84022 425 aaKnown RBP12.96□□□□□ -0.33
MRPL55-203ENST00000336520 SSRP1Q08945 709 aaKnown RBP12.96□□□□□ -0.33
MRPL55-203ENST00000336520 ZNF697Q5TEC3 545 aa12.96□□□□□ -0.33
MRPL55-203ENST00000336520 MCTP2Q6DN12 878 aa12.96□□□□□ -0.33
MRPL55-203ENST00000336520 DEFB128Q7Z7B8 93 aa12.96□□□□□ -0.33
MRPL55-203ENST00000336520 CAGE1Q8TC20 777 aa12.96□□□□□ -0.33
MRPL55-203ENST00000336520 BICD2Q8TD16 824 aa12.96□□□□□ -0.33
MRPL55-203ENST00000336520 MXRA8Q9BRK3 442 aa12.96□□□□□ -0.33
MRPL55-203ENST00000336520 ZMYND12Q9H0C1 365 aa12.96□□□□□ -0.33
MRPL55-203ENST00000336520 ZNF215Q9UL58 517 aaPredicted RBP12.96□□□□□ -0.33
MRPL55-203ENST00000336520 MAFGO15525 162 aa12.95□□□□□ -0.34
MRPL55-203ENST00000336520 ATP9AO75110 1047 aa12.95□□□□□ -0.34
MRPL55-203ENST00000336520 SMIM10L2AP0DMW4 78 aa12.95□□□□□ -0.34
MRPL55-203ENST00000336520 SMIM10L2BP0DMW5 78 aa12.95□□□□□ -0.34
MRPL55-203ENST00000336520 RFC2P35250 354 aa12.95□□□□□ -0.34
MRPL55-203ENST00000336520 CLK2P49760 499 aaKnown RBP12.95□□□□□ -0.34
MRPL55-203ENST00000336520 ARHGAP4P98171 946 aa12.95□□□□□ -0.34
MRPL55-203ENST00000336520 CEP55Q53EZ4 464 aa12.95□□□□□ -0.34
MRPL55-203ENST00000336520 OTOP2Q7RTS6 562 aa12.95□□□□□ -0.34
MRPL55-203ENST00000336520 TRIM50Q86XT4 487 aa12.95□□□□□ -0.34
MRPL55-203ENST00000336520 HERVK_113Q902F9 699 aa12.95□□□□□ -0.34
MRPL55-203ENST00000336520 SDF4Q9BRK5 362 aa12.95□□□□□ -0.34
MRPL55-203ENST00000336520 KCNH7Q9NS40 1196 aa12.95□□□□□ -0.34
MRPL55-203ENST00000336520 VPS54Q9P1Q0 977 aa12.95□□□□□ -0.34
MRPL55-203ENST00000336520 LAMA2P24043 3122 aaKnown RBP12.94□□□□□ -0.34
MRPL55-203ENST00000336520 HSFX4A0A1B0GTS1 333 aaPredicted RBP12.94□□□□□ -0.34
MRPL55-203ENST00000336520 HSFX3A0A1B0GWH4 333 aaPredicted RBP12.94□□□□□ -0.34
MRPL55-203ENST00000336520 C17orf102A2RUQ5 167 aa12.94□□□□□ -0.34
MRPL55-203ENST00000336520 ZBBXA8MT70 800 aa12.94□□□□□ -0.34
MRPL55-203ENST00000336520 CDKL5O76039 1030 aa12.94□□□□□ -0.34
MRPL55-203ENST00000336520 PFKMP08237 780 aa12.94□□□□□ -0.34
MRPL55-203ENST00000336520 IQCF3P0C7M6 154 aa12.94□□□□□ -0.34
MRPL55-203ENST00000336520 TCF7P36402 384 aaPredicted RBP12.94□□□□□ -0.34
MRPL55-203ENST00000336520 NLRP5P59047 1200 aa12.94□□□□□ -0.34
MRPL55-203ENST00000336520 ZNF200P98182 395 aaPredicted RBP12.94□□□□□ -0.34
MRPL55-203ENST00000336520 PTK7Q13308 1070 aa12.94□□□□□ -0.34
MRPL55-203ENST00000336520 ANKRD1Q15327 319 aa12.94□□□□□ -0.34
MRPL55-203ENST00000336520 FAM109BQ6ICB4 259 aaPredicted RBP12.94□□□□□ -0.34
MRPL55-203ENST00000336520 CYP2W1Q8TAV3 490 aa12.94□□□□□ -0.34
MRPL55-203ENST00000336520 AFAP1L1Q8TED9 768 aa12.94□□□□□ -0.34
MRPL55-203ENST00000336520 SEPT1Q8WYJ6 367 aa12.94□□□□□ -0.34
MRPL55-203ENST00000336520 GLG1Q92896 1179 aa12.94□□□□□ -0.34
MRPL55-203ENST00000336520 ATP6V0A1Q93050 837 aa12.94□□□□□ -0.34
MRPL55-203ENST00000336520 FAM161BQ96MY7 647 aa12.94□□□□□ -0.34
MRPL55-203ENST00000336520 CTAGE1Q96RT6 745 aa12.94□□□□□ -0.34
MRPL55-203ENST00000336520 FTOQ9C0B1 505 aaKnown RBP eCLIP12.94□□□□□ -0.34
MRPL55-203ENST00000336520 SLKQ9H2G2 1235 aaPredicted RBP12.94□□□□□ -0.34
MRPL55-203ENST00000336520 JPH1Q9HDC5 661 aaPredicted RBP12.94□□□□□ -0.34
MRPL55-203ENST00000336520 SH3GLB2Q9NR46 395 aa12.94□□□□□ -0.34
MRPL55-203ENST00000336520 TELO2Q9Y4R8 837 aa12.94□□□□□ -0.34
MRPL55-203ENST00000336520 MEIS1O00470 390 aa12.93□□□□□ -0.34
MRPL55-203ENST00000336520 DEXIO95424 95 aa12.93□□□□□ -0.34
MRPL55-203ENST00000336520 ARP10275 920 aa12.93□□□□□ -0.34
MRPL55-203ENST00000336520 GNAT1P11488 350 aa12.93□□□□□ -0.34
MRPL55-203ENST00000336520 ACTN1P12814 892 aa12.93□□□□□ -0.34
MRPL55-203ENST00000336520 SELPP16109 830 aa12.93□□□□□ -0.34
MRPL55-203ENST00000336520 RASIP1Q5U651 963 aa12.93□□□□□ -0.34
MRPL55-203ENST00000336520 LRRC8DQ7L1W4 858 aa12.93□□□□□ -0.34
MRPL55-203ENST00000336520 PLA2G4DQ86XP0 818 aa12.93□□□□□ -0.34
MRPL55-203ENST00000336520 RASGRP4Q8TDF6 673 aa12.93□□□□□ -0.34
MRPL55-203ENST00000336520 DHX38Q92620 1227 aaKnown RBP12.93□□□□□ -0.34
MRPL55-203ENST00000336520 CXXC1Q9P0U4 656 aaPredicted RBP12.93□□□□□ -0.34
MRPL55-203ENST00000336520 SLC9A2Q9UBY0 812 aa12.93□□□□□ -0.34
MRPL55-203ENST00000336520 SLC4A7Q9Y6M7 1214 aa12.93□□□□□ -0.34
MRPL55-203ENST00000336520 SZT2Q5T011 3432 aa12.93□□□□□ -0.34
MRPL55-203ENST00000336520 TANC1Q9C0D5 1861 aa12.93□□□□□ -0.34
MRPL55-203ENST00000336520 GSTTP1A0A1W2PQM5 241 aa12.92□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms