RNA–Protein interactions for RNA: ENST00000335760.9

APOBEC3B-202, Transcript of apolipoprotein B mRNA editing enzyme catalytic subunit 3B, humanhuman

TSL 1 (best)

Gene APOBEC3B, Length 1,359 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC3B-202ENST00000335760 Q9Y3F1 56 aa15.94■□□□□ 0.14
APOBEC3B-202ENST00000335760 NFASCO94856 1347 aa15.94■□□□□ 0.14
APOBEC3B-202ENST00000335760 SYNRGQ9UMZ2 1314 aa15.94■□□□□ 0.14
APOBEC3B-202ENST00000335760 DDX39AO00148 427 aaKnown RBP15.93■□□□□ 0.14
APOBEC3B-202ENST00000335760 BAG4O95429 457 aaKnown RBP15.93■□□□□ 0.14
APOBEC3B-202ENST00000335760 GJB1P08034 283 aa15.93■□□□□ 0.14
APOBEC3B-202ENST00000335760 LAMC2Q13753 1193 aa15.93■□□□□ 0.14
APOBEC3B-202ENST00000335760 SLC5A5Q92911 643 aa15.93■□□□□ 0.14
APOBEC3B-202ENST00000335760 FAM20AQ96MK3 541 aa15.93■□□□□ 0.14
APOBEC3B-202ENST00000335760 UPF3AQ9H1J1 476 aaKnown RBP15.93■□□□□ 0.14
APOBEC3B-202ENST00000335760 TMEM60Q9H2L4 133 aa15.93■□□□□ 0.14
APOBEC3B-202ENST00000335760 SPC25Q9HBM1 224 aa15.93■□□□□ 0.14
APOBEC3B-202ENST00000335760 TBC1D22BQ9NU19 505 aa15.93■□□□□ 0.14
APOBEC3B-202ENST00000335760 CIZ1Q9ULV3 898 aaPredicted RBP15.93■□□□□ 0.14
APOBEC3B-202ENST00000335760 FRMPD3Q5JV73 1810 aa15.93■□□□□ 0.14
APOBEC3B-202ENST00000335760 MYH15Q9Y2K3 1946 aa15.93■□□□□ 0.14
APOBEC3B-202ENST00000335760 POTEFA5A3E0 1075 aa15.92■□□□□ 0.14
APOBEC3B-202ENST00000335760 TBX3O15119 743 aa15.92■□□□□ 0.14
APOBEC3B-202ENST00000335760 DHX15O43143 795 aaKnown RBP15.92■□□□□ 0.14
APOBEC3B-202ENST00000335760 GAS7O60861 476 aa15.92■□□□□ 0.14
APOBEC3B-202ENST00000335760 FARP2O94887 1054 aaPredicted RBP15.92■□□□□ 0.14
APOBEC3B-202ENST00000335760 SGPL1O95470 568 aa15.92■□□□□ 0.14
APOBEC3B-202ENST00000335760 MYCNP04198 464 aaPredicted RBP15.92■□□□□ 0.14
APOBEC3B-202ENST00000335760 C6orf222P0C671 652 aaPredicted RBP15.92■□□□□ 0.14
APOBEC3B-202ENST00000335760 GJA9P57773 515 aa15.92■□□□□ 0.14
APOBEC3B-202ENST00000335760 IRX5P78411 483 aaPredicted RBP15.92■□□□□ 0.14
APOBEC3B-202ENST00000335760 SP4Q02446 784 aa15.92■□□□□ 0.14
APOBEC3B-202ENST00000335760 LRCH2Q5VUJ6 765 aa15.92■□□□□ 0.14
APOBEC3B-202ENST00000335760 METTL7BQ6UX53 244 aa15.92■□□□□ 0.14
APOBEC3B-202ENST00000335760 TNS4Q8IZW8 715 aa15.92■□□□□ 0.14
APOBEC3B-202ENST00000335760 U2AF1L4Q8WU68 220 aaKnown RBP15.92■□□□□ 0.14
APOBEC3B-202ENST00000335760 AFG1LQ8WV93 481 aa15.92■□□□□ 0.14
APOBEC3B-202ENST00000335760 HAS1Q92839 578 aa15.92■□□□□ 0.14
APOBEC3B-202ENST00000335760 EMID1Q96A84 441 aaPredicted RBP15.92■□□□□ 0.14
APOBEC3B-202ENST00000335760 SPATA33Q96N06 139 aa15.92■□□□□ 0.14
APOBEC3B-202ENST00000335760 ZNF396Q96N95 335 aaPredicted RBP15.92■□□□□ 0.14
APOBEC3B-202ENST00000335760 MTMR9Q96QG7 549 aa15.92■□□□□ 0.14
APOBEC3B-202ENST00000335760 FTOQ9C0B1 505 aaKnown RBP eCLIP15.92■□□□□ 0.14
APOBEC3B-202ENST00000335760 JPH1Q9HDC5 661 aaPredicted RBP15.92■□□□□ 0.14
APOBEC3B-202ENST00000335760 CLIC4Q9Y696 253 aa15.92■□□□□ 0.14
APOBEC3B-202ENST00000335760 MYADML2A6NDP7 307 aa15.91■□□□□ 0.14
APOBEC3B-202ENST00000335760 ADAMTS4O75173 837 aa15.91■□□□□ 0.14
APOBEC3B-202ENST00000335760 TFRCP02786 760 aaKnown RBP15.91■□□□□ 0.14
APOBEC3B-202ENST00000335760 OR52Z1P0C646 297 aa15.91■□□□□ 0.14
APOBEC3B-202ENST00000335760 BEX3Q00994 111 aa15.91■□□□□ 0.14
APOBEC3B-202ENST00000335760 CEBPZQ03701 1054 aaKnown RBP15.91■□□□□ 0.14
APOBEC3B-202ENST00000335760 PTGDRQ13258 359 aa15.91■□□□□ 0.14
APOBEC3B-202ENST00000335760 SF3A1Q15459 793 aaKnown RBP15.91■□□□□ 0.14
APOBEC3B-202ENST00000335760 SLFN12Q8IYM2 578 aa15.91■□□□□ 0.14
APOBEC3B-202ENST00000335760 C4orf32Q8N8J7 132 aa15.91■□□□□ 0.14
APOBEC3B-202ENST00000335760 ABHD8Q96I13 439 aa15.91■□□□□ 0.14
APOBEC3B-202ENST00000335760 RIT2Q99578 217 aa15.91■□□□□ 0.14
APOBEC3B-202ENST00000335760 TEKT3Q9BXF9 490 aa15.91■□□□□ 0.14
APOBEC3B-202ENST00000335760 CHMP5Q9NZZ3 219 aa15.91■□□□□ 0.14
APOBEC3B-202ENST00000335760 SLC9A2Q9UBY0 812 aa15.91■□□□□ 0.14
APOBEC3B-202ENST00000335760 TCEAL9Q9UHQ7 104 aa15.91■□□□□ 0.14
APOBEC3B-202ENST00000335760 OGDHLQ9ULD0 1010 aa15.91■□□□□ 0.14
APOBEC3B-202ENST00000335760 CEP131Q9UPN4 1083 aa15.91■□□□□ 0.14
APOBEC3B-202ENST00000335760 TELO2Q9Y4R8 837 aa15.91■□□□□ 0.14
APOBEC3B-202ENST00000335760 NOP56O00567 594 aaKnown RBP15.9■□□□□ 0.14
APOBEC3B-202ENST00000335760 CTAGE5O15320 804 aa15.9■□□□□ 0.14
APOBEC3B-202ENST00000335760 PSMD10O75832 226 aa15.9■□□□□ 0.14
APOBEC3B-202ENST00000335760 TXKP42681 527 aa15.9■□□□□ 0.14
APOBEC3B-202ENST00000335760 GJA8P48165 433 aa15.9■□□□□ 0.14
APOBEC3B-202ENST00000335760 CPT1AP50416 773 aa15.9■□□□□ 0.14
APOBEC3B-202ENST00000335760 LRRC41Q15345 812 aa15.9■□□□□ 0.14
APOBEC3B-202ENST00000335760 FSCN1Q16658 493 aaKnown RBP15.9■□□□□ 0.14
APOBEC3B-202ENST00000335760 HSDL1Q3SXM5 330 aa15.9■□□□□ 0.14
APOBEC3B-202ENST00000335760 GNASQ5JWF2 1037 aa15.9■□□□□ 0.14
APOBEC3B-202ENST00000335760 RNF180Q86T96 592 aa15.9■□□□□ 0.14
APOBEC3B-202ENST00000335760 ARRDC4Q8NCT1 418 aa15.9■□□□□ 0.14
APOBEC3B-202ENST00000335760 KLHDC9Q8NEP7 349 aa15.9■□□□□ 0.14
APOBEC3B-202ENST00000335760 PPTC7Q8NI37 304 aa15.9■□□□□ 0.14
APOBEC3B-202ENST00000335760 USP28Q96RU2 1077 aa15.9■□□□□ 0.14
APOBEC3B-202ENST00000335760 CRISPLD2Q9H0B8 497 aa15.9■□□□□ 0.14
APOBEC3B-202ENST00000335760 TFIP11Q9UBB9 837 aaKnown RBP15.9■□□□□ 0.14
APOBEC3B-202ENST00000335760 ATP6V1DQ9Y5K8 247 aa15.9■□□□□ 0.14
APOBEC3B-202ENST00000335760 A6NJR5 290 aa15.89■□□□□ 0.13
APOBEC3B-202ENST00000335760 LAD1O00515 517 aa15.89■□□□□ 0.13
APOBEC3B-202ENST00000335760 CHMP2AO43633 222 aa15.89■□□□□ 0.13
APOBEC3B-202ENST00000335760 BMP15O95972 392 aa15.89■□□□□ 0.13
APOBEC3B-202ENST00000335760 CCNE2O96020 404 aa15.89■□□□□ 0.13
APOBEC3B-202ENST00000335760 NKX3-2P78367 333 aa15.89■□□□□ 0.13
APOBEC3B-202ENST00000335760 ATP2C1P98194 919 aaPredicted RBP15.89■□□□□ 0.13
APOBEC3B-202ENST00000335760 KRT76Q01546 638 aa15.89■□□□□ 0.13
APOBEC3B-202ENST00000335760 DNM1Q05193 864 aaKnown RBP15.89■□□□□ 0.13
APOBEC3B-202ENST00000335760 BRDTQ58F21 947 aaPredicted RBP15.89■□□□□ 0.13
APOBEC3B-202ENST00000335760 GPR20Q99678 358 aa15.89■□□□□ 0.13
APOBEC3B-202ENST00000335760 UNC45AQ9H3U1 944 aa15.89■□□□□ 0.13
APOBEC3B-202ENST00000335760 TTC12Q9H892 705 aaPredicted RBP15.89■□□□□ 0.13
APOBEC3B-202ENST00000335760 VAV3Q9UKW4 847 aa15.89■□□□□ 0.13
APOBEC3B-202ENST00000335760 PCDHA12Q9UN75 941 aa15.89■□□□□ 0.13
APOBEC3B-202ENST00000335760 GSTTP1A0A1W2PQM5 241 aa15.88■□□□□ 0.13
APOBEC3B-202ENST00000335760 ZEB2O60315 1214 aa15.88■□□□□ 0.13
APOBEC3B-202ENST00000335760 MMP3P08254 477 aa15.88■□□□□ 0.13
APOBEC3B-202ENST00000335760 CST5P28325 142 aaPredicted RBP15.88■□□□□ 0.13
APOBEC3B-202ENST00000335760 ACTR2P61160 394 aa15.88■□□□□ 0.13
APOBEC3B-202ENST00000335760 PTPAQ15257 358 aa15.88■□□□□ 0.13
APOBEC3B-202ENST00000335760 KCNA10Q16322 511 aa15.88■□□□□ 0.13
APOBEC3B-202ENST00000335760 ATL3Q6DD88 541 aa15.88■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms