RNA–Protein interactions for RNA: ENST00000330588.4

SMG1-201, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 5 BASIC

Gene SMG1, Length 1,588 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-201ENST00000330588 CYP2C19P33261 490 aa7.42□□□□□ -1.22
SMG1-201ENST00000330588 PHKA2P46019 1235 aa7.42□□□□□ -1.22
SMG1-201ENST00000330588 SNX17Q15036 470 aa7.42□□□□□ -1.22
SMG1-201ENST00000330588 TSGA10IPQ3SY00 556 aa7.42□□□□□ -1.22
SMG1-201ENST00000330588 HABP4Q5JVS0 413 aaKnown RBP7.42□□□□□ -1.22
SMG1-201ENST00000330588 C1orf229Q6ZS94 237 aaPredicted RBP7.42□□□□□ -1.22
SMG1-201ENST00000330588 TBC1D10CQ8IV04 446 aa7.42□□□□□ -1.22
SMG1-201ENST00000330588 TRPV1Q8NER1 839 aa7.42□□□□□ -1.22
SMG1-201ENST00000330588 DPF3Q92784 378 aa7.42□□□□□ -1.22
SMG1-201ENST00000330588 TMEM47Q9BQJ4 181 aa7.42□□□□□ -1.22
SMG1-201ENST00000330588 NDFIP2Q9NV92 336 aa7.42□□□□□ -1.22
SMG1-201ENST00000330588 PHF24Q9UPV7 400 aa7.42□□□□□ -1.22
SMG1-201ENST00000330588 CNPY2Q9Y2B0 182 aa7.42□□□□□ -1.22
SMG1-201ENST00000330588 LRRC37A2A6NM11 1700 aa7.42□□□□□ -1.22
SMG1-201ENST00000330588 PDE4DIPQ5VU43 2346 aa7.42□□□□□ -1.22
SMG1-201ENST00000330588 NEDD4P46934 1319 aa7.42□□□□□ -1.22
SMG1-201ENST00000330588 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP7.42□□□□□ -1.22
SMG1-201ENST00000330588 ASB14A6NK59 587 aa7.42□□□□□ -1.22
SMG1-201ENST00000330588 SHISA8B8ZZ34 492 aa7.42□□□□□ -1.22
SMG1-201ENST00000330588 KBTBD13C9JR72 458 aa7.42□□□□□ -1.22
SMG1-201ENST00000330588 H0YGN5 161 aa7.42□□□□□ -1.22
SMG1-201ENST00000330588 SGSM2O43147 1006 aa7.42□□□□□ -1.22
SMG1-201ENST00000330588 ATP9BO43861 1147 aa7.42□□□□□ -1.22
SMG1-201ENST00000330588 ZNF865P0CJ78 1059 aaPredicted RBP7.42□□□□□ -1.22
SMG1-201ENST00000330588 PDHBP11177 359 aa7.42□□□□□ -1.22
SMG1-201ENST00000330588 MCCP23508 829 aa7.42□□□□□ -1.22
SMG1-201ENST00000330588 CHMLP26374 656 aa7.42□□□□□ -1.22
SMG1-201ENST00000330588 MSX1P28360 303 aa7.42□□□□□ -1.22
SMG1-201ENST00000330588 SNRPNP63162 240 aaKnown RBP7.42□□□□□ -1.22
SMG1-201ENST00000330588 ZNF543Q08ER8 600 aa7.42□□□□□ -1.22
SMG1-201ENST00000330588 ASPRV1Q53RT3 343 aa7.42□□□□□ -1.22
SMG1-201ENST00000330588 GNASQ5JWF2 1037 aa7.42□□□□□ -1.22
SMG1-201ENST00000330588 CENPQQ7L2Z9 268 aaPredicted RBP7.42□□□□□ -1.22
SMG1-201ENST00000330588 STK11IPQ8N1F8 1099 aa7.42□□□□□ -1.22
SMG1-201ENST00000330588 SAMD3Q8N6K7 520 aa7.42□□□□□ -1.22
SMG1-201ENST00000330588 FAM133AQ8N9E0 248 aa7.42□□□□□ -1.22
SMG1-201ENST00000330588 MORC4Q8TE76 937 aa7.42□□□□□ -1.22
SMG1-201ENST00000330588 DIS3LQ8TF46 1054 aaKnown RBP7.42□□□□□ -1.22
SMG1-201ENST00000330588 DDX11Q96FC9 970 aa7.42□□□□□ -1.22
SMG1-201ENST00000330588 SEZ6LQ9BYH1 1024 aa7.42□□□□□ -1.22
SMG1-201ENST00000330588 ABHD16BQ9H3Z7 469 aa7.42□□□□□ -1.22
SMG1-201ENST00000330588 RAVER2Q9HCJ3 691 aaKnown RBP7.42□□□□□ -1.22
SMG1-201ENST00000330588 PRR12Q9ULL5 1215 aa7.42□□□□□ -1.22
SMG1-201ENST00000330588 RIPK3Q9Y572 518 aa7.42□□□□□ -1.22
SMG1-201ENST00000330588 HTTP42858 3142 aa7.41□□□□□ -1.22
SMG1-201ENST00000330588 NMT2O60551 498 aa7.41□□□□□ -1.22
SMG1-201ENST00000330588 RARBP10826 455 aa7.41□□□□□ -1.22
SMG1-201ENST00000330588 RFX1P22670 979 aa7.41□□□□□ -1.22
SMG1-201ENST00000330588 PDE4CQ08493 712 aa7.41□□□□□ -1.22
SMG1-201ENST00000330588 IKQ13123 557 aaPredicted RBP7.41□□□□□ -1.22
SMG1-201ENST00000330588 SYDE2Q5VT97 1194 aa7.41□□□□□ -1.22
SMG1-201ENST00000330588 ANKRD35Q8N283 1001 aa7.41□□□□□ -1.22
SMG1-201ENST00000330588 RGS22Q8NE09 1264 aa7.41□□□□□ -1.22
SMG1-201ENST00000330588 UPF3AQ9H1J1 476 aaKnown RBP7.41□□□□□ -1.22
SMG1-201ENST00000330588 ETNK1Q9HBU6 452 aa7.41□□□□□ -1.22
SMG1-201ENST00000330588 TOMM22Q9NS69 142 aa7.41□□□□□ -1.22
SMG1-201ENST00000330588 RNF146Q9NTX7 359 aa7.41□□□□□ -1.22
SMG1-201ENST00000330588 GDF2Q9UK05 429 aaPredicted RBP7.41□□□□□ -1.22
SMG1-201ENST00000330588 FAM184BQ9ULE4 1060 aa7.41□□□□□ -1.22
SMG1-201ENST00000330588 Q9Y3F1 56 aa7.41□□□□□ -1.22
SMG1-201ENST00000330588 ADAM23O75077 832 aa7.4□□□□□ -1.22
SMG1-201ENST00000330588 DUSP11O75319 330 aaKnown RBP7.4□□□□□ -1.22
SMG1-201ENST00000330588 SNAI1O95863 264 aaPredicted RBP7.4□□□□□ -1.22
SMG1-201ENST00000330588 PGK2P07205 417 aa7.4□□□□□ -1.22
SMG1-201ENST00000330588 HOXB4P17483 251 aaPredicted RBP7.4□□□□□ -1.22
SMG1-201ENST00000330588 CNGA1P29973 690 aa7.4□□□□□ -1.22
SMG1-201ENST00000330588 HAND2P61296 217 aa7.4□□□□□ -1.22
SMG1-201ENST00000330588 TRAF1Q13077 416 aa7.4□□□□□ -1.22
SMG1-201ENST00000330588 USP4Q13107 963 aa7.4□□□□□ -1.22
SMG1-201ENST00000330588 LRRC41Q15345 812 aa7.4□□□□□ -1.22
SMG1-201ENST00000330588 CCDC96Q2M329 555 aa7.4□□□□□ -1.22
SMG1-201ENST00000330588 RRP12Q5JTH9 1297 aaKnown RBP7.4□□□□□ -1.22
SMG1-201ENST00000330588 TMEM214Q6NUQ4 689 aaKnown RBP7.4□□□□□ -1.22
SMG1-201ENST00000330588 KCTD1Q719H9 257 aa7.4□□□□□ -1.22
SMG1-201ENST00000330588 RNF180Q86T96 592 aa7.4□□□□□ -1.22
SMG1-201ENST00000330588 CPXCR1Q8N123 301 aa7.4□□□□□ -1.22
SMG1-201ENST00000330588 RHBDD1Q8TEB9 315 aa7.4□□□□□ -1.22
SMG1-201ENST00000330588 MAP4K1Q92918 833 aa7.4□□□□□ -1.22
SMG1-201ENST00000330588 FGD4Q96M96 766 aa7.4□□□□□ -1.22
SMG1-201ENST00000330588 GDF15Q99988 308 aa7.4□□□□□ -1.22
SMG1-201ENST00000330588 CRISPLD1Q9H336 500 aa7.4□□□□□ -1.22
SMG1-201ENST00000330588 A1CFQ9NQ94 594 aaKnown RBP7.4□□□□□ -1.22
SMG1-201ENST00000330588 INCENPQ9NQS7 918 aa7.4□□□□□ -1.22
SMG1-201ENST00000330588 CCPG1Q9ULG6 757 aa7.4□□□□□ -1.22
SMG1-201ENST00000330588 ATXN7L1Q9ULK2 861 aaPredicted RBP7.4□□□□□ -1.22
SMG1-201ENST00000330588 B4DLN1 442 aa7.39□□□□□ -1.23
SMG1-201ENST00000330588 C2CD2LO14523 706 aa7.39□□□□□ -1.23
SMG1-201ENST00000330588 ADAMTS4O75173 837 aa7.39□□□□□ -1.23
SMG1-201ENST00000330588 SKIP12755 728 aa7.39□□□□□ -1.23
SMG1-201ENST00000330588 MRPL12P52815 198 aaKnown RBP7.39□□□□□ -1.23
SMG1-201ENST00000330588 GHRHRQ02643 423 aa7.39□□□□□ -1.23
SMG1-201ENST00000330588 TRDNQ13061 729 aa7.39□□□□□ -1.23
SMG1-201ENST00000330588 ACVR2BQ13705 512 aa7.39□□□□□ -1.23
SMG1-201ENST00000330588 SEC23AQ15436 765 aa7.39□□□□□ -1.23
SMG1-201ENST00000330588 BMP2KLQ5H9B9 411 aa7.39□□□□□ -1.23
SMG1-201ENST00000330588 RNF135Q8IUD6 432 aa7.39□□□□□ -1.23
SMG1-201ENST00000330588 ENAHQ8N8S7 591 aaPredicted RBP7.39□□□□□ -1.23
SMG1-201ENST00000330588 KLHDC9Q8NEP7 349 aa7.39□□□□□ -1.23
SMG1-201ENST00000330588 DNERQ8NFT8 737 aa7.39□□□□□ -1.23
SMG1-201ENST00000330588 PKNOX2Q96KN3 472 aa7.39□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms