RNA–Protein interactions for RNA: ENST00000328514.11

GINS3-202, Transcript of GINS complex subunit 3, humanhuman

TSL 1 (best) BASIC

Gene GINS3, Length 1,932 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GINS3-202ENST00000328514 QPCTQ16769 361 aa12.38□□□□□ -0.43
GINS3-202ENST00000328514 INF2Q27J81 1249 aa12.38□□□□□ -0.43
GINS3-202ENST00000328514 SPRED3Q2MJR0 410 aa12.38□□□□□ -0.43
GINS3-202ENST00000328514 SBK1Q52WX2 424 aa12.38□□□□□ -0.43
GINS3-202ENST00000328514 C10orf76Q5T2E6 689 aa12.38□□□□□ -0.43
GINS3-202ENST00000328514 GKAP1Q5VSY0 366 aaPredicted RBP12.38□□□□□ -0.43
GINS3-202ENST00000328514 SFMBT2Q5VUG0 894 aa12.38□□□□□ -0.43
GINS3-202ENST00000328514 CACNA2D4Q7Z3S7 1137 aa12.38□□□□□ -0.43
GINS3-202ENST00000328514 DGKHQ86XP1 1220 aa12.38□□□□□ -0.43
GINS3-202ENST00000328514 POLD4Q9HCU8 107 aa12.38□□□□□ -0.43
GINS3-202ENST00000328514 BARHL2Q9NY43 387 aa12.38□□□□□ -0.43
GINS3-202ENST00000328514 STK17AQ9UEE5 414 aa12.38□□□□□ -0.43
GINS3-202ENST00000328514 SWAP70Q9UH65 585 aa12.38□□□□□ -0.43
GINS3-202ENST00000328514 SLIT2O94813 1529 aa12.38□□□□□ -0.43
GINS3-202ENST00000328514 CCDC188H7C350 402 aa12.37□□□□□ -0.43
GINS3-202ENST00000328514 PPIP5K2O43314 1243 aa12.37□□□□□ -0.43
GINS3-202ENST00000328514 RTN2O75298 545 aa12.37□□□□□ -0.43
GINS3-202ENST00000328514 NOL4O94818 638 aa12.37□□□□□ -0.43
GINS3-202ENST00000328514 CTNNA1P35221 906 aaKnown RBP12.37□□□□□ -0.43
GINS3-202ENST00000328514 USP11P51784 963 aa12.37□□□□□ -0.43
GINS3-202ENST00000328514 PSMD2Q13200 908 aa12.37□□□□□ -0.43
GINS3-202ENST00000328514 RIPK1Q13546 671 aa12.37□□□□□ -0.43
GINS3-202ENST00000328514 FAM83BQ5T0W9 1011 aa12.37□□□□□ -0.43
GINS3-202ENST00000328514 MAB21L3Q8N8X9 362 aa12.37□□□□□ -0.43
GINS3-202ENST00000328514 RASGRP4Q8TDF6 673 aa12.37□□□□□ -0.43
GINS3-202ENST00000328514 RAPGEF5Q92565 580 aa12.37□□□□□ -0.43
GINS3-202ENST00000328514 PLIN2Q99541 437 aa12.37□□□□□ -0.43
GINS3-202ENST00000328514 MMTAG2Q9BU76 263 aaKnown RBP12.37□□□□□ -0.43
GINS3-202ENST00000328514 CARD10Q9BWT7 1032 aa12.37□□□□□ -0.43
GINS3-202ENST00000328514 AIPL1Q9NZN9 384 aa12.37□□□□□ -0.43
GINS3-202ENST00000328514 COL5A2P05997 1499 aaPredicted RBP12.37□□□□□ -0.43
GINS3-202ENST00000328514 A0A1B0GUA9 196 aa12.37□□□□□ -0.43
GINS3-202ENST00000328514 USP17L12C9JPN9 530 aa12.37□□□□□ -0.43
GINS3-202ENST00000328514 USP17L21D6R901 530 aa12.37□□□□□ -0.43
GINS3-202ENST00000328514 NMT2O60551 498 aa12.37□□□□□ -0.43
GINS3-202ENST00000328514 FTCDO95954 541 aa12.37□□□□□ -0.43
GINS3-202ENST00000328514 PDHBP11177 359 aa12.37□□□□□ -0.43
GINS3-202ENST00000328514 CYP19A1P11511 503 aaPredicted RBP12.37□□□□□ -0.43
GINS3-202ENST00000328514 DRD4P21917 467 aa12.37□□□□□ -0.43
GINS3-202ENST00000328514 SATB1Q01826 763 aa12.37□□□□□ -0.43
GINS3-202ENST00000328514 GRM4Q14833 912 aa12.37□□□□□ -0.43
GINS3-202ENST00000328514 HOMEZQ8IX15 550 aa12.37□□□□□ -0.43
GINS3-202ENST00000328514 TLCD1Q96CP7 247 aa12.37□□□□□ -0.43
GINS3-202ENST00000328514 HOOK2Q96ED9 719 aa12.37□□□□□ -0.43
GINS3-202ENST00000328514 FAXDC2Q96IV6 333 aa12.37□□□□□ -0.43
GINS3-202ENST00000328514 HAUS2Q9NVX0 235 aa12.37□□□□□ -0.43
GINS3-202ENST00000328514 ATAD5Q96QE3 1844 aa12.36□□□□□ -0.43
GINS3-202ENST00000328514 CASZ1Q86V15 1759 aa12.36□□□□□ -0.43
GINS3-202ENST00000328514 A0A0G2JS52 829 aa12.36□□□□□ -0.43
GINS3-202ENST00000328514 STXBP3O00186 592 aa12.36□□□□□ -0.43
GINS3-202ENST00000328514 SCP2P22307 547 aa12.36□□□□□ -0.43
GINS3-202ENST00000328514 EIF3BP55884 814 aaKnown RBP12.36□□□□□ -0.43
GINS3-202ENST00000328514 MARSP56192 900 aaKnown RBP12.36□□□□□ -0.43
GINS3-202ENST00000328514 RPS6KA1Q15418 735 aa12.36□□□□□ -0.43
GINS3-202ENST00000328514 ZCWPW2Q504Y3 356 aa12.36□□□□□ -0.43
GINS3-202ENST00000328514 TDRD12Q587J7 1177 aaKnown RBP12.36□□□□□ -0.43
GINS3-202ENST00000328514 ERMARDQ5T6L9 678 aa12.36□□□□□ -0.43
GINS3-202ENST00000328514 TOM1L2Q6ZVM7 507 aa12.36□□□□□ -0.43
GINS3-202ENST00000328514 SV2BQ7L1I2 683 aa12.36□□□□□ -0.43
GINS3-202ENST00000328514 KRT25Q7Z3Z0 450 aa12.36□□□□□ -0.43
GINS3-202ENST00000328514 FMNL3Q8IVF7 1028 aa12.36□□□□□ -0.43
GINS3-202ENST00000328514 TAF4BQ92750 862 aa12.36□□□□□ -0.43
GINS3-202ENST00000328514 GPKOWQ92917 476 aaPredicted RBP eCLIP12.36□□□□□ -0.43
GINS3-202ENST00000328514 CALML4Q96GE6 196 aa12.36□□□□□ -0.43
GINS3-202ENST00000328514 ZMYND12Q9H0C1 365 aa12.36□□□□□ -0.43
GINS3-202ENST00000328514 CENPHQ9H3R5 247 aa12.36□□□□□ -0.43
GINS3-202ENST00000328514 SLITRK6Q9H5Y7 841 aa12.36□□□□□ -0.43
GINS3-202ENST00000328514 SLC39A2Q9NP94 309 aa12.36□□□□□ -0.43
GINS3-202ENST00000328514 ATP8A2Q9NTI2 1148 aa12.36□□□□□ -0.43
GINS3-202ENST00000328514 CNOT8Q9UFF9 292 aaKnown RBP12.36□□□□□ -0.43
GINS3-202ENST00000328514 ASAP1Q9ULH1 1129 aa12.36□□□□□ -0.43
GINS3-202ENST00000328514 KIF4AO95239 1232 aa12.35□□□□□ -0.43
GINS3-202ENST00000328514 IGHMBP2P38935 993 aaKnown RBP12.35□□□□□ -0.43
GINS3-202ENST00000328514 DYNLL1P63167 89 aaKnown RBP12.35□□□□□ -0.43
GINS3-202ENST00000328514 HLTFQ14527 1009 aaKnown RBP eCLIP12.35□□□□□ -0.43
GINS3-202ENST00000328514 ITIH4Q14624 930 aa12.35□□□□□ -0.43
GINS3-202ENST00000328514 IFI16Q16666 785 aaKnown RBP12.35□□□□□ -0.43
GINS3-202ENST00000328514 TMC3Q7Z5M5 1100 aa12.35□□□□□ -0.43
GINS3-202ENST00000328514 DEFB132Q7Z7B7 95 aa12.35□□□□□ -0.43
GINS3-202ENST00000328514 CEP57Q86XR8 500 aa12.35□□□□□ -0.43
GINS3-202ENST00000328514 LRRC57Q8N9N7 239 aa12.35□□□□□ -0.43
GINS3-202ENST00000328514 ZNF384Q8TF68 577 aa12.35□□□□□ -0.43
GINS3-202ENST00000328514 PIGBQ92521 554 aa12.35□□□□□ -0.43
GINS3-202ENST00000328514 HVCN1Q96D96 273 aa12.35□□□□□ -0.43
GINS3-202ENST00000328514 EBF2Q9HAK2 575 aa12.35□□□□□ -0.43
GINS3-202ENST00000328514 BLOC1S4Q9NUP1 217 aa12.35□□□□□ -0.43
GINS3-202ENST00000328514 ARPP21Q9UBL0 812 aaPredicted RBP12.35□□□□□ -0.43
GINS3-202ENST00000328514 KIAA1551Q9HCM1 1747 aa12.35□□□□□ -0.43
GINS3-202ENST00000328514 MYMKA6NI61 221 aa12.35□□□□□ -0.43
GINS3-202ENST00000328514 CCT8L1PA6NM43 557 aa12.35□□□□□ -0.43
GINS3-202ENST00000328514 F8W031 263 aaPredicted RBP12.35□□□□□ -0.43
GINS3-202ENST00000328514 PPP1R12AO14974 1030 aaPredicted RBP12.35□□□□□ -0.43
GINS3-202ENST00000328514 ASAP2O43150 1006 aa12.35□□□□□ -0.43
GINS3-202ENST00000328514 SART1O43290 800 aaKnown RBP12.35□□□□□ -0.43
GINS3-202ENST00000328514 GNA14O95837 355 aa12.35□□□□□ -0.43
GINS3-202ENST00000328514 ANXA13P27216 316 aa12.35□□□□□ -0.43
GINS3-202ENST00000328514 TMOD1P28289 359 aa12.35□□□□□ -0.43
GINS3-202ENST00000328514 IL6STP40189 918 aaPredicted RBP12.35□□□□□ -0.43
GINS3-202ENST00000328514 ELF3P78545 371 aaPredicted RBP12.35□□□□□ -0.43
GINS3-202ENST00000328514 CHRNDQ07001 517 aa12.35□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms