RNA–Protein interactions for RNA: ENST00000324288.12

CIITA-201, Transcript of class II major histocompatibility complex transactivator, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CIITA, Length 11,952 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIITA-201ENST00000324288 CMA1P23946 247 aa8.53□□□□□ -1.04
CIITA-201ENST00000324288 EPHB1P54762 984 aa8.53□□□□□ -1.04
CIITA-201ENST00000324288 ENOX1Q8TC92 643 aaKnown RBP8.53□□□□□ -1.04
CIITA-201ENST00000324288 RHBDL2Q9NX52 303 aa8.53□□□□□ -1.04
CIITA-201ENST00000324288 STK24Q9Y6E0 443 aa8.53□□□□□ -1.04
CIITA-201ENST00000324288 MEIS1O00470 390 aa8.53□□□□□ -1.04
CIITA-201ENST00000324288 CYTH1Q15438 398 aa8.53□□□□□ -1.04
CIITA-201ENST00000324288 NOSTRINQ8IVI9 506 aa8.53□□□□□ -1.04
CIITA-201ENST00000324288 HESX1Q9UBX0 185 aa8.53□□□□□ -1.04
CIITA-201ENST00000324288 MAN1B1Q9UKM7 699 aa8.53□□□□□ -1.04
CIITA-201ENST00000324288 PCDHA13Q9Y5I0 950 aa8.53□□□□□ -1.04
CIITA-201ENST00000324288 OSTNP61366 133 aa8.53□□□□□ -1.04
CIITA-201ENST00000324288 KIAA0825Q8IV33 1275 aa8.53□□□□□ -1.04
CIITA-201ENST00000324288 BLIDQ8IZY5 108 aa8.53□□□□□ -1.04
CIITA-201ENST00000324288 RASGRP4Q8TDF6 673 aa8.53□□□□□ -1.04
CIITA-201ENST00000324288 SAYSD1Q9NPB0 183 aa8.53□□□□□ -1.04
CIITA-201ENST00000324288 A0A1W2PP64 1363 aa8.53□□□□□ -1.04
CIITA-201ENST00000324288 GGCXP38435 758 aa8.53□□□□□ -1.04
CIITA-201ENST00000324288 ADAM9Q13443 819 aa8.53□□□□□ -1.04
CIITA-201ENST00000324288 ACBD5Q5T8D3 534 aaPredicted RBP8.53□□□□□ -1.04
CIITA-201ENST00000324288 FTOQ9C0B1 505 aaKnown RBP eCLIP8.53□□□□□ -1.04
CIITA-201ENST00000324288 GTPBP6O43824 516 aaPredicted RBP8.52□□□□□ -1.04
CIITA-201ENST00000324288 ZNF280CQ8ND82 737 aa8.52□□□□□ -1.04
CIITA-201ENST00000324288 PCIF1Q9H4Z3 704 aa8.52□□□□□ -1.04
CIITA-201ENST00000324288 GIMAP4Q9NUV9 329 aa8.52□□□□□ -1.04
CIITA-201ENST00000324288 ZFP69BQ9UJL9 534 aa8.52□□□□□ -1.04
CIITA-201ENST00000324288 GOLGA8MH3BSY2 632 aa8.52□□□□□ -1.05
CIITA-201ENST00000324288 ZBTB7BO15156 539 aaPredicted RBP8.52□□□□□ -1.05
CIITA-201ENST00000324288 OR52Z1P0C646 297 aa8.52□□□□□ -1.05
CIITA-201ENST00000324288 ADD1P35611 737 aaKnown RBP8.52□□□□□ -1.05
CIITA-201ENST00000324288 EPHB4P54760 987 aa8.52□□□□□ -1.05
CIITA-201ENST00000324288 APBA1Q02410 837 aa8.52□□□□□ -1.05
CIITA-201ENST00000324288 HADHQ16836 314 aaKnown RBP8.52□□□□□ -1.05
CIITA-201ENST00000324288 ANO4Q32M45 955 aa8.52□□□□□ -1.05
CIITA-201ENST00000324288 EEPD1Q7L9B9 569 aa8.52□□□□□ -1.05
CIITA-201ENST00000324288 DNAAF3Q8N9W5 541 aa8.52□□□□□ -1.05
CIITA-201ENST00000324288 TTC17Q96AE7 1141 aa8.52□□□□□ -1.05
CIITA-201ENST00000324288 NUDCD1Q96RS6 583 aa8.52□□□□□ -1.05
CIITA-201ENST00000324288 RPS6KC1Q96S38 1066 aa8.52□□□□□ -1.05
CIITA-201ENST00000324288 FBXO2Q9UK22 296 aaPredicted RBP8.52□□□□□ -1.05
CIITA-201ENST00000324288 KIAA1024Q9UPX6 916 aa8.52□□□□□ -1.05
CIITA-201ENST00000324288 CSADQ9Y600 493 aa8.52□□□□□ -1.05
CIITA-201ENST00000324288 TRPC1P48995 793 aa8.52□□□□□ -1.05
CIITA-201ENST00000324288 BTKQ06187 659 aa8.52□□□□□ -1.05
CIITA-201ENST00000324288 FBXW10Q5XX13 1052 aa8.52□□□□□ -1.05
CIITA-201ENST00000324288 PDZD4Q76G19 769 aaPredicted RBP8.52□□□□□ -1.05
CIITA-201ENST00000324288 MAPK13O15264 365 aa8.52□□□□□ -1.05
CIITA-201ENST00000324288 MAPK4P31152 587 aa8.52□□□□□ -1.05
CIITA-201ENST00000324288 ADALQ6DHV7 355 aa8.52□□□□□ -1.05
CIITA-201ENST00000324288 ADPGKQ9BRR6 497 aa8.52□□□□□ -1.05
CIITA-201ENST00000324288 CCPG1Q9ULG6 757 aa8.52□□□□□ -1.05
CIITA-201ENST00000324288 PHLPP2Q6ZVD8 1323 aa8.52□□□□□ -1.05
CIITA-201ENST00000324288 TSC22D4Q9Y3Q8 395 aa8.52□□□□□ -1.05
CIITA-201ENST00000324288 USP17L12C9JPN9 530 aa8.52□□□□□ -1.05
CIITA-201ENST00000324288 USP17L21D6R901 530 aa8.52□□□□□ -1.05
CIITA-201ENST00000324288 H0YC42 278 aa8.52□□□□□ -1.05
CIITA-201ENST00000324288 HNRNPDLO14979 420 aaKnown RBP8.52□□□□□ -1.05
CIITA-201ENST00000324288 CD2BP2O95400 341 aaKnown RBP8.52□□□□□ -1.05
CIITA-201ENST00000324288 YWHAHQ04917 246 aaPredicted RBP8.52□□□□□ -1.05
CIITA-201ENST00000324288 DYNC1I2Q13409 638 aaKnown RBP8.52□□□□□ -1.05
CIITA-201ENST00000324288 MTRQ99707 1265 aa8.52□□□□□ -1.05
CIITA-201ENST00000324288 MAST3O60307 1309 aa8.52□□□□□ -1.05
CIITA-201ENST00000324288 NEK2P51955 445 aa8.52□□□□□ -1.05
CIITA-201ENST00000324288 TOGARAM2Q6ZUX3 1019 aa8.52□□□□□ -1.05
CIITA-201ENST00000324288 NLRP14Q86W24 1093 aa8.52□□□□□ -1.05
CIITA-201ENST00000324288 CNPY4Q8N129 248 aa8.52□□□□□ -1.05
CIITA-201ENST00000324288 FBXO18Q8NFZ0 1043 aa8.52□□□□□ -1.05
CIITA-201ENST00000324288 KIFC3Q9BVG8 833 aa8.52□□□□□ -1.05
CIITA-201ENST00000324288 SNX25Q9H3E2 840 aa8.52□□□□□ -1.05
CIITA-201ENST00000324288 GGT7Q9UJ14 662 aa8.52□□□□□ -1.05
CIITA-201ENST00000324288 DCTN4Q9UJW0 460 aa8.52□□□□□ -1.05
CIITA-201ENST00000324288 TRPC5Q9UL62 973 aaPredicted RBP8.52□□□□□ -1.05
CIITA-201ENST00000324288 NCLNQ969V3 563 aa8.52□□□□□ -1.05
CIITA-201ENST00000324288 ITM2BQ9Y287 266 aa8.52□□□□□ -1.05
CIITA-201ENST00000324288 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP8.52□□□□□ -1.05
CIITA-201ENST00000324288 MYH7P12883 1935 aa8.52□□□□□ -1.05
CIITA-201ENST00000324288 AOX1Q06278 1338 aa8.52□□□□□ -1.05
CIITA-201ENST00000324288 DYTNA2CJ06 578 aa8.52□□□□□ -1.05
CIITA-201ENST00000324288 NBPF20Q3BBV1 942 aa8.52□□□□□ -1.05
CIITA-201ENST00000324288 TRIM60Q495X7 471 aa8.52□□□□□ -1.05
CIITA-201ENST00000324288 C6orf118Q5T5N4 469 aa8.52□□□□□ -1.05
CIITA-201ENST00000324288 TRIM42Q8IWZ5 723 aa8.52□□□□□ -1.05
CIITA-201ENST00000324288 SYT2Q8N9I0 419 aaPredicted RBP8.52□□□□□ -1.05
CIITA-201ENST00000324288 KBTBD3Q8NAB2 608 aa8.52□□□□□ -1.05
CIITA-201ENST00000324288 BBOF1Q8ND07 529 aa8.52□□□□□ -1.05
CIITA-201ENST00000324288 TYW1Q9NV66 732 aaKnown RBP8.52□□□□□ -1.05
CIITA-201ENST00000324288 SNX24Q9Y343 169 aa8.52□□□□□ -1.05
CIITA-201ENST00000324288 DMRT2Q9Y5R5 561 aa8.52□□□□□ -1.05
CIITA-201ENST00000324288 ERBB4Q15303 1308 aa8.51□□□□□ -1.05
CIITA-201ENST00000324288 EXOC1LA0A1B0GW35 172 aa8.51□□□□□ -1.05
CIITA-201ENST00000324288 NCK2O43639 380 aa8.51□□□□□ -1.05
CIITA-201ENST00000324288 RPS6P62753 249 aaKnown RBP8.51□□□□□ -1.05
CIITA-201ENST00000324288 MRPL28Q13084 256 aaKnown RBP8.51□□□□□ -1.05
CIITA-201ENST00000324288 CCDC90BQ9GZT6 254 aa8.51□□□□□ -1.05
CIITA-201ENST00000324288 SYCP2Q9BX26 1530 aa8.51□□□□□ -1.05
CIITA-201ENST00000324288 GDF11O95390 407 aa8.51□□□□□ -1.05
CIITA-201ENST00000324288 TERF2Q15554 542 aa8.51□□□□□ -1.05
CIITA-201ENST00000324288 ARHGEF18Q6ZSZ5 1173 aa8.51□□□□□ -1.05
CIITA-201ENST00000324288 CRLF3Q8IUI8 442 aa8.51□□□□□ -1.05
CIITA-201ENST00000324288 PITPNM3Q9BZ71 974 aa8.51□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms