RNA–Protein interactions for RNA: ENST00000324266.9

TRAPPC12-201, Transcript of trafficking protein particle complex 12, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene TRAPPC12, Length 2,508 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC12-201ENST00000324266 RAB27AP51159 221 aa19.94■□□□□ 0.78
TRAPPC12-201ENST00000324266 SND1Q7KZF4 910 aaKnown RBP eCLIP19.94■□□□□ 0.78
TRAPPC12-201ENST00000324266 MAPKAPK5Q8IW41 473 aa19.94■□□□□ 0.78
TRAPPC12-201ENST00000324266 SH2D4AQ9H788 454 aa19.94■□□□□ 0.78
TRAPPC12-201ENST00000324266 MAGEF1Q9HAY2 307 aa19.94■□□□□ 0.78
TRAPPC12-201ENST00000324266 SLC40A1Q9NP59 571 aa19.94■□□□□ 0.78
TRAPPC12-201ENST00000324266 BIN2Q9UBW5 565 aaPredicted RBP19.94■□□□□ 0.78
TRAPPC12-201ENST00000324266 CCNL1Q9UK58 526 aaPredicted RBP19.94■□□□□ 0.78
TRAPPC12-201ENST00000324266 PLAGL2Q9UPG8 496 aa19.94■□□□□ 0.78
TRAPPC12-201ENST00000324266 NCK2O43639 380 aa19.93■□□□□ 0.78
TRAPPC12-201ENST00000324266 USO1O60763 962 aaKnown RBP19.93■□□□□ 0.78
TRAPPC12-201ENST00000324266 TACC1O75410 805 aa19.93■□□□□ 0.78
TRAPPC12-201ENST00000324266 PDHBP11177 359 aa19.93■□□□□ 0.78
TRAPPC12-201ENST00000324266 GBP2P32456 591 aaPredicted RBP19.93■□□□□ 0.78
TRAPPC12-201ENST00000324266 CDR1P51861 262 aa19.93■□□□□ 0.78
TRAPPC12-201ENST00000324266 CDK17Q00537 523 aa19.93■□□□□ 0.78
TRAPPC12-201ENST00000324266 FIGNQ5HY92 759 aa19.93■□□□□ 0.78
TRAPPC12-201ENST00000324266 CNNM4Q6P4Q7 775 aa19.93■□□□□ 0.78
TRAPPC12-201ENST00000324266 TRIM58Q8NG06 486 aa19.93■□□□□ 0.78
TRAPPC12-201ENST00000324266 TBCKQ8TEA7 893 aa19.93■□□□□ 0.78
TRAPPC12-201ENST00000324266 TSGA10Q9BZW7 698 aa19.93■□□□□ 0.78
TRAPPC12-201ENST00000324266 NDST4Q9H3R1 872 aa19.93■□□□□ 0.78
TRAPPC12-201ENST00000324266 TMEM260Q9NX78 707 aa19.93■□□□□ 0.78
TRAPPC12-201ENST00000324266 SIK3Q9Y2K2 1263 aa19.93■□□□□ 0.78
TRAPPC12-201ENST00000324266 GOLGA6BA6NDN3 693 aa19.93■□□□□ 0.78
TRAPPC12-201ENST00000324266 VWA3BQ502W6 1294 aa19.93■□□□□ 0.78
TRAPPC12-201ENST00000324266 KRT25Q7Z3Z0 450 aa19.93■□□□□ 0.78
TRAPPC12-201ENST00000324266 YTHDF3Q7Z739 585 aaKnown RBP19.93■□□□□ 0.78
TRAPPC12-201ENST00000324266 NEK8Q86SG6 692 aa19.93■□□□□ 0.78
TRAPPC12-201ENST00000324266 DRAXINQ8NBI3 349 aaPredicted RBP19.93■□□□□ 0.78
TRAPPC12-201ENST00000324266 AENQ8WTP8 325 aaKnown RBP19.93■□□□□ 0.78
TRAPPC12-201ENST00000324266 NLRP3Q96P20 1036 aa19.93■□□□□ 0.78
TRAPPC12-201ENST00000324266 SALL4Q9UJQ4 1053 aa19.93■□□□□ 0.78
TRAPPC12-201ENST00000324266 MYMKA6NI61 221 aa19.92■□□□□ 0.78
TRAPPC12-201ENST00000324266 MTA1Q13330 715 aa19.92■□□□□ 0.78
TRAPPC12-201ENST00000324266 RRAGAQ7L523 313 aa19.92■□□□□ 0.78
TRAPPC12-201ENST00000324266 CCDC155Q8N6L0 562 aa19.92■□□□□ 0.78
TRAPPC12-201ENST00000324266 SPATA4Q8NEY3 305 aa19.92■□□□□ 0.78
TRAPPC12-201ENST00000324266 LMBR1Q8WVP7 490 aa19.92■□□□□ 0.78
TRAPPC12-201ENST00000324266 SRP68Q9UHB9 627 aaKnown RBP19.92■□□□□ 0.78
TRAPPC12-201ENST00000324266 CCDC88AQ3V6T2 1871 aa19.92■□□□□ 0.78
TRAPPC12-201ENST00000324266 LRRC53A6NM62 1247 aa19.92■□□□□ 0.78
TRAPPC12-201ENST00000324266 NDUFAB1O14561 156 aa19.92■□□□□ 0.78
TRAPPC12-201ENST00000324266 AKR1B10O60218 316 aa19.92■□□□□ 0.78
TRAPPC12-201ENST00000324266 LDHBP07195 334 aaKnown RBP19.92■□□□□ 0.78
TRAPPC12-201ENST00000324266 RASA1P20936 1047 aa19.92■□□□□ 0.78
TRAPPC12-201ENST00000324266 IQCEQ6IPM2 695 aa19.92■□□□□ 0.78
TRAPPC12-201ENST00000324266 CENPPQ6IPU0 288 aa19.92■□□□□ 0.78
TRAPPC12-201ENST00000324266 CCDC50Q8IVM0 306 aa19.92■□□□□ 0.78
TRAPPC12-201ENST00000324266 OSBPL9Q96SU4 736 aa19.92■□□□□ 0.78
TRAPPC12-201ENST00000324266 FAM184BQ9ULE4 1060 aa19.92■□□□□ 0.78
TRAPPC12-201ENST00000324266 AMPD3Q01432 767 aa19.91■□□□□ 0.78
TRAPPC12-201ENST00000324266 GRB10Q13322 594 aa19.91■□□□□ 0.78
TRAPPC12-201ENST00000324266 SLC10A5Q5PT55 438 aa19.91■□□□□ 0.78
TRAPPC12-201ENST00000324266 TRIM74Q86UV6 250 aa19.91■□□□□ 0.78
TRAPPC12-201ENST00000324266 TRIM73Q86UV7 250 aa19.91■□□□□ 0.78
TRAPPC12-201ENST00000324266 FAM228AQ86W67 206 aa19.91■□□□□ 0.78
TRAPPC12-201ENST00000324266 PARP9Q8IXQ6 854 aa19.91■□□□□ 0.78
TRAPPC12-201ENST00000324266 CCDC13Q8IYE1 715 aa19.91■□□□□ 0.78
TRAPPC12-201ENST00000324266 MMGT1Q8N4V1 131 aa19.91■□□□□ 0.78
TRAPPC12-201ENST00000324266 GLIS3Q8NEA6 775 aa19.91■□□□□ 0.78
TRAPPC12-201ENST00000324266 SPDYE1Q8NFV5 336 aaPredicted RBP19.91■□□□□ 0.78
TRAPPC12-201ENST00000324266 CALML4Q96GE6 196 aa19.91■□□□□ 0.78
TRAPPC12-201ENST00000324266 ANKRD2Q9GZV1 360 aa19.91■□□□□ 0.78
TRAPPC12-201ENST00000324266 HOMER3Q9NSC5 361 aa19.91■□□□□ 0.78
TRAPPC12-201ENST00000324266 BLOC1S4Q9NUP1 217 aa19.91■□□□□ 0.78
TRAPPC12-201ENST00000324266 C1QTNF12Q5T7M4 302 aa19.91■□□□□ 0.78
TRAPPC12-201ENST00000324266 MICALCLQ6ZW33 695 aa19.91■□□□□ 0.78
TRAPPC12-201ENST00000324266 SV2BQ7L1I2 683 aa19.91■□□□□ 0.78
TRAPPC12-201ENST00000324266 GPR101Q96P66 508 aaPredicted RBP19.91■□□□□ 0.78
TRAPPC12-201ENST00000324266 UBA5Q9GZZ9 404 aa19.91■□□□□ 0.78
TRAPPC12-201ENST00000324266 BATF3Q9NR55 127 aa19.91■□□□□ 0.78
TRAPPC12-201ENST00000324266 HNRNPH3P31942 346 aaKnown RBP19.9■□□□□ 0.78
TRAPPC12-201ENST00000324266 LRRC41Q15345 812 aa19.9■□□□□ 0.78
TRAPPC12-201ENST00000324266 SPTY2D1Q68D10 685 aaPredicted RBP19.9■□□□□ 0.78
TRAPPC12-201ENST00000324266 CCDC70Q6NSX1 233 aa19.9■□□□□ 0.78
TRAPPC12-201ENST00000324266 PIGSQ96S52 555 aa19.9■□□□□ 0.78
TRAPPC12-201ENST00000324266 C6orf50Q9HD87 102 aa19.9■□□□□ 0.78
TRAPPC12-201ENST00000324266 ENO4A6NNW6 628 aa19.9■□□□□ 0.78
TRAPPC12-201ENST00000324266 BUB1O43683 1085 aa19.9■□□□□ 0.78
TRAPPC12-201ENST00000324266 GFPT1Q06210 699 aaPredicted RBP19.9■□□□□ 0.78
TRAPPC12-201ENST00000324266 E2F5Q15329 346 aa19.9■□□□□ 0.78
TRAPPC12-201ENST00000324266 ARMC3Q5W041 872 aa19.9■□□□□ 0.78
TRAPPC12-201ENST00000324266 RPUSD2Q8IZ73 545 aaKnown RBP19.9■□□□□ 0.78
TRAPPC12-201ENST00000324266 C3orf20Q8ND61 904 aa19.9■□□□□ 0.78
TRAPPC12-201ENST00000324266 RPSAP08865 295 aaKnown RBP19.89■□□□□ 0.77
TRAPPC12-201ENST00000324266 SOGA3Q5TF21 947 aa19.89■□□□□ 0.77
TRAPPC12-201ENST00000324266 TMC4Q7Z404 712 aa19.89■□□□□ 0.77
TRAPPC12-201ENST00000324266 RSRC1Q96IZ7 334 aaKnown RBP19.89■□□□□ 0.77
TRAPPC12-201ENST00000324266 PNMA5Q96PV4 448 aa19.89■□□□□ 0.77
TRAPPC12-201ENST00000324266 SPZ1Q9BXG8 430 aa19.89■□□□□ 0.77
TRAPPC12-201ENST00000324266 PPP1R12BO60237 982 aaPredicted RBP19.89■□□□□ 0.77
TRAPPC12-201ENST00000324266 MAGEA1P43355 309 aa19.89■□□□□ 0.77
TRAPPC12-201ENST00000324266 RASSF7Q02833 373 aa19.89■□□□□ 0.77
TRAPPC12-201ENST00000324266 SH3GL2Q99962 352 aa19.89■□□□□ 0.77
TRAPPC12-201ENST00000324266 NUDT12Q9BQG2 462 aa19.89■□□□□ 0.77
TRAPPC12-201ENST00000324266 PAGR1Q9BTK6 254 aa19.89■□□□□ 0.77
TRAPPC12-201ENST00000324266 LRRC4BQ9NT99 713 aa19.89■□□□□ 0.77
TRAPPC12-201ENST00000324266 POTEMA6NI47 508 aa19.88■□□□□ 0.77
TRAPPC12-201ENST00000324266 GNA11P29992 359 aa19.88■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms