RNA–Protein interactions for RNA: ENST00000323853.9

SNRNP200-201, Transcript of small nuclear ribonucleoprotein U5 subunit 200, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNRNP200, Length 7,165 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP200-201ENST00000323853 TMTC3Q6ZXV5 915 aa11.85□□□□□ -0.51
SNRNP200-201ENST00000323853 NDST4Q9H3R1 872 aa11.85□□□□□ -0.51
SNRNP200-201ENST00000323853 PALM3A6NDB9 673 aaPredicted RBP11.85□□□□□ -0.51
SNRNP200-201ENST00000323853 MYO1FO00160 1098 aa11.85□□□□□ -0.51
SNRNP200-201ENST00000323853 BBOX1O75936 387 aa11.85□□□□□ -0.51
SNRNP200-201ENST00000323853 RNF8O76064 485 aa11.85□□□□□ -0.51
SNRNP200-201ENST00000323853 EPHA10Q5JZY3 1008 aa11.85□□□□□ -0.51
SNRNP200-201ENST00000323853 NLGN1Q8N2Q7 840 aa11.85□□□□□ -0.51
SNRNP200-201ENST00000323853 GRAPQ13588 217 aa11.85□□□□□ -0.51
SNRNP200-201ENST00000323853 PPP4R3CPQ6ZMV5 832 aa11.85□□□□□ -0.51
SNRNP200-201ENST00000323853 NME8Q8N427 588 aa11.85□□□□□ -0.51
SNRNP200-201ENST00000323853 GRAPLQ8TC17 118 aaPredicted RBP11.85□□□□□ -0.51
SNRNP200-201ENST00000323853 DHX36Q9H2U1 1008 aaKnown RBP11.85□□□□□ -0.51
SNRNP200-201ENST00000323853 POC1B-GALNT4F8VUJ3 575 aa11.85□□□□□ -0.51
SNRNP200-201ENST00000323853 TLR3O15455 904 aaKnown RBP11.85□□□□□ -0.51
SNRNP200-201ENST00000323853 ALS2CLQ60I27 953 aa11.85□□□□□ -0.51
SNRNP200-201ENST00000323853 SESTD1Q86VW0 696 aa11.85□□□□□ -0.51
SNRNP200-201ENST00000323853 RRP15Q9Y3B9 282 aaKnown RBP11.85□□□□□ -0.51
SNRNP200-201ENST00000323853 SUN1O94901 812 aa11.84□□□□□ -0.51
SNRNP200-201ENST00000323853 KRT1P04264 644 aa11.84□□□□□ -0.51
SNRNP200-201ENST00000323853 IGKV5-2P06315 115 aa11.84□□□□□ -0.51
SNRNP200-201ENST00000323853 MAP2K2P36507 400 aa11.84□□□□□ -0.51
SNRNP200-201ENST00000323853 YWHAGP61981 247 aaKnown RBP eCLIP11.84□□□□□ -0.516e-7■□□□□ 10
SNRNP200-201ENST00000323853 SLFNL1Q499Z3 407 aa11.84□□□□□ -0.51
SNRNP200-201ENST00000323853 PHLDB3Q6NSJ2 640 aa11.84□□□□□ -0.51
SNRNP200-201ENST00000323853 DHX40Q8IX18 779 aaKnown RBP11.84□□□□□ -0.51
SNRNP200-201ENST00000323853 ANAPC5Q9UJX4 755 aa11.84□□□□□ -0.51
SNRNP200-201ENST00000323853 REREQ9P2R6 1566 aa11.84□□□□□ -0.51
SNRNP200-201ENST00000323853 NT5C2P49902 561 aa11.84□□□□□ -0.51
SNRNP200-201ENST00000323853 IGBP1P78318 339 aa11.84□□□□□ -0.51
SNRNP200-201ENST00000323853 EFCC1Q9HA90 598 aa11.84□□□□□ -0.51
SNRNP200-201ENST00000323853 LRRN2O75325 713 aa11.84□□□□□ -0.51
SNRNP200-201ENST00000323853 NNTQ13423 1086 aa11.84□□□□□ -0.51
SNRNP200-201ENST00000323853 PRPSAP1Q14558 356 aa11.84□□□□□ -0.51
SNRNP200-201ENST00000323853 SH3RF3Q8TEJ3 882 aaPredicted RBP11.84□□□□□ -0.51
SNRNP200-201ENST00000323853 SERPINB13Q9UIV8 391 aa11.84□□□□□ -0.51
SNRNP200-201ENST00000323853 HIP1RO75146 1068 aa11.84□□□□□ -0.51
SNRNP200-201ENST00000323853 MAP7D3Q8IWC1 876 aa11.84□□□□□ -0.51
SNRNP200-201ENST00000323853 ATP8A1Q9Y2Q0 1164 aa11.84□□□□□ -0.51
SNRNP200-201ENST00000323853 TRIM68Q6AZZ1 485 aa11.84□□□□□ -0.51
SNRNP200-201ENST00000323853 DBNDD1Q9H9R9 158 aa11.84□□□□□ -0.51
SNRNP200-201ENST00000323853 PARVGQ9HBI0 331 aa11.84□□□□□ -0.51
SNRNP200-201ENST00000323853 ABCB6Q9NP58 842 aa11.84□□□□□ -0.51
SNRNP200-201ENST00000323853 ARHGEF40Q8TER5 1519 aa11.84□□□□□ -0.51
SNRNP200-201ENST00000323853 TMOD1P28289 359 aa11.83□□□□□ -0.51
SNRNP200-201ENST00000323853 PLTPP55058 493 aa11.83□□□□□ -0.51
SNRNP200-201ENST00000323853 ITKQ08881 620 aa11.83□□□□□ -0.51
SNRNP200-201ENST00000323853 ARID5BQ14865 1188 aa11.83□□□□□ -0.51
SNRNP200-201ENST00000323853 MB21D2Q8IYB1 491 aaPredicted RBP11.83□□□□□ -0.51
SNRNP200-201ENST00000323853 CDKL2Q92772 493 aa11.83□□□□□ -0.51
SNRNP200-201ENST00000323853 ANO3Q9BYT9 981 aa11.83□□□□□ -0.51
SNRNP200-201ENST00000323853 AFG3L2Q9Y4W6 797 aa11.83□□□□□ -0.51
SNRNP200-201ENST00000323853 TMED2Q15363 201 aa11.83□□□□□ -0.52
SNRNP200-201ENST00000323853 PFKFB3Q16875 520 aaPredicted RBP11.83□□□□□ -0.52
SNRNP200-201ENST00000323853 CNOT10Q9H9A5 744 aaKnown RBP11.83□□□□□ -0.52
SNRNP200-201ENST00000323853 WHAMMQ8TF30 809 aa11.83□□□□□ -0.52
SNRNP200-201ENST00000323853 GBP5Q96PP8 586 aa11.83□□□□□ -0.52
SNRNP200-201ENST00000323853 LY9Q9HBG7 655 aa11.83□□□□□ -0.52
SNRNP200-201ENST00000323853 MAD1L1Q9Y6D9 718 aa11.83□□□□□ -0.52
SNRNP200-201ENST00000323853 CCDC151A5D8V7 595 aa11.83□□□□□ -0.52
SNRNP200-201ENST00000323853 CYP2E1P05181 493 aaPredicted RBP11.83□□□□□ -0.52
SNRNP200-201ENST00000323853 INHBAP08476 426 aa11.83□□□□□ -0.52
SNRNP200-201ENST00000323853 EAPPQ56P03 285 aaPredicted RBP11.83□□□□□ -0.52
SNRNP200-201ENST00000323853 EFCAB13Q8IY85 973 aa11.83□□□□□ -0.52
SNRNP200-201ENST00000323853 HLFQ16534 295 aa11.83□□□□□ -0.52
SNRNP200-201ENST00000323853 SH2D4BQ5SQS7 431 aa11.83□□□□□ -0.52
SNRNP200-201ENST00000323853 DCAF4Q8WV16 495 aa11.83□□□□□ -0.52
SNRNP200-201ENST00000323853 ZNF277Q9NRM2 450 aaPredicted RBP11.83□□□□□ -0.52
SNRNP200-201ENST00000323853 PRR29P0C7W0 189 aa11.83□□□□□ -0.52
SNRNP200-201ENST00000323853 HSPA6P17066 643 aa11.83□□□□□ -0.52
SNRNP200-201ENST00000323853 DR1Q01658 176 aa11.83□□□□□ -0.52
SNRNP200-201ENST00000323853 ALCAMQ13740 583 aa11.83□□□□□ -0.52
SNRNP200-201ENST00000323853 TBC1D10BQ4KMP7 808 aaPredicted RBP11.83□□□□□ -0.52
SNRNP200-201ENST00000323853 FMR1NBQ8N0W7 255 aaPredicted RBP11.83□□□□□ -0.52
SNRNP200-201ENST00000323853 ABHD10Q9NUJ1 306 aa11.83□□□□□ -0.52
SNRNP200-201ENST00000323853 BCS1LQ9Y276 419 aa11.83□□□□□ -0.52
SNRNP200-201ENST00000323853 CAMSAP1Q5T5Y3 1602 aa11.82□□□□□ -0.52
SNRNP200-201ENST00000323853 SLC7A5Q01650 507 aa11.82□□□□□ -0.52
SNRNP200-201ENST00000323853 IFT88Q13099 833 aa11.82□□□□□ -0.52
SNRNP200-201ENST00000323853 DCPSQ96C86 337 aaKnown RBP11.82□□□□□ -0.52
SNRNP200-201ENST00000323853 CDHR2Q9BYE9 1310 aa11.82□□□□□ -0.52
SNRNP200-201ENST00000323853 MED7O43513 233 aa11.82□□□□□ -0.52
SNRNP200-201ENST00000323853 BAG2O95816 211 aa11.82□□□□□ -0.52
SNRNP200-201ENST00000323853 PTPREP23469 700 aa11.82□□□□□ -0.52
SNRNP200-201ENST00000323853 DHX9Q08211 1270 aaKnown RBP11.82□□□□□ -0.52
SNRNP200-201ENST00000323853 FBXO38Q6PIJ6 1188 aa11.82□□□□□ -0.52
SNRNP200-201ENST00000323853 FAM196AQ6ZSG2 479 aa11.82□□□□□ -0.52
SNRNP200-201ENST00000323853 CCHCR1Q8TD31 782 aa11.82□□□□□ -0.52
SNRNP200-201ENST00000323853 CLTAP09496 248 aa11.82□□□□□ -0.52
SNRNP200-201ENST00000323853 CTTNQ14247 550 aaKnown RBP11.82□□□□□ -0.52
SNRNP200-201ENST00000323853 CASP8Q14790 479 aa11.82□□□□□ -0.52
SNRNP200-201ENST00000323853 DIXDC1Q155Q3 683 aa11.82□□□□□ -0.52
SNRNP200-201ENST00000323853 UNC13DQ70J99 1090 aa11.82□□□□□ -0.52
SNRNP200-201ENST00000323853 DIS3Q9Y2L1 958 aaKnown RBP11.82□□□□□ -0.52
SNRNP200-201ENST00000323853 SLMAPQ14BN4 828 aa11.82□□□□□ -0.52
SNRNP200-201ENST00000323853 EXOC8Q8IYI6 725 aa11.82□□□□□ -0.52
SNRNP200-201ENST00000323853 RAD54LQ92698 747 aa11.82□□□□□ -0.52
SNRNP200-201ENST00000323853 PI4KBQ9UBF8 816 aa11.82□□□□□ -0.52
SNRNP200-201ENST00000323853 KAT6BQ8WYB5 2073 aa11.82□□□□□ -0.52
SNRNP200-201ENST00000323853 SYNJ2BP-COX16A0A087WUM0 186 aa11.82□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 51.6 ms