RNA–Protein interactions for RNA: ENST00000318266.9

PTPRA-202, Transcript of protein tyrosine phosphatase, receptor type A, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PTPRA, Length 3,219 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRA-202ENST00000318266 A0A087X0T9 212 aa10.61□□□□□ -0.71
PTPRA-202ENST00000318266 TLR2O60603 784 aa10.61□□□□□ -0.71
PTPRA-202ENST00000318266 STARD3NLO95772 234 aa10.61□□□□□ -0.71
PTPRA-202ENST00000318266 FAM228BP0C875 321 aa10.61□□□□□ -0.71
PTPRA-202ENST00000318266 GCFC2P16383 781 aaKnown RBP10.61□□□□□ -0.71
PTPRA-202ENST00000318266 HNRNPH3P31942 346 aaKnown RBP10.61□□□□□ -0.71
PTPRA-202ENST00000318266 EN1Q05925 392 aaPredicted RBP10.61□□□□□ -0.71
PTPRA-202ENST00000318266 MAN2A1Q16706 1144 aa10.61□□□□□ -0.71
PTPRA-202ENST00000318266 SLC9C1Q4G0N8 1177 aa10.61□□□□□ -0.71
PTPRA-202ENST00000318266 HGSNATQ68CP4 663 aa10.61□□□□□ -0.71
PTPRA-202ENST00000318266 PPP4R3AQ6IN85 833 aa10.61□□□□□ -0.71
PTPRA-202ENST00000318266 FAM133AQ8N9E0 248 aa10.61□□□□□ -0.71
PTPRA-202ENST00000318266 THOC1Q96FV9 657 aaKnown RBP10.61□□□□□ -0.71
PTPRA-202ENST00000318266 INPP4AQ96PE3 977 aaPredicted RBP10.61□□□□□ -0.71
PTPRA-202ENST00000318266 MTA3Q9BTC8 594 aa10.61□□□□□ -0.71
PTPRA-202ENST00000318266 SLC12A6Q9UHW9 1150 aa10.61□□□□□ -0.71
PTPRA-202ENST00000318266 PCDHA6Q9UN73 950 aa10.61□□□□□ -0.71
PTPRA-202ENST00000318266 PCDHA8Q9Y5H6 950 aa10.61□□□□□ -0.71
PTPRA-202ENST00000318266 NHSQ6T4R5 1651 aa10.61□□□□□ -0.71
PTPRA-202ENST00000318266 DAPK3O43293 454 aa10.6□□□□□ -0.71
PTPRA-202ENST00000318266 HSPA9P38646 679 aaKnown RBP10.6□□□□□ -0.71
PTPRA-202ENST00000318266 TXKP42681 527 aa10.6□□□□□ -0.71
PTPRA-202ENST00000318266 GKAP1Q5VSY0 366 aaPredicted RBP10.6□□□□□ -0.71
PTPRA-202ENST00000318266 NAIF1Q69YI7 327 aaPredicted RBP10.6□□□□□ -0.71
PTPRA-202ENST00000318266 ADAT2Q7Z6V5 191 aaKnown RBP10.6□□□□□ -0.71
PTPRA-202ENST00000318266 CCDC84Q86UT8 332 aaPredicted RBP10.6□□□□□ -0.71
PTPRA-202ENST00000318266 CD302Q8IX05 232 aa10.6□□□□□ -0.71
PTPRA-202ENST00000318266 USP38Q8NB14 1042 aa10.6□□□□□ -0.71
PTPRA-202ENST00000318266 PAGR1Q9BTK6 254 aa10.6□□□□□ -0.71
PTPRA-202ENST00000318266 LSM14BQ9BX40 385 aaKnown RBP10.6□□□□□ -0.71
PTPRA-202ENST00000318266 ACTR5Q9H9F9 607 aaPredicted RBP10.6□□□□□ -0.71
PTPRA-202ENST00000318266 AMACRQ9UHK6 382 aa10.6□□□□□ -0.71
PTPRA-202ENST00000318266 TLDC2A0PJX2 215 aa10.6□□□□□ -0.71
PTPRA-202ENST00000318266 PPP2R2AP63151 447 aa10.6□□□□□ -0.71
PTPRA-202ENST00000318266 IFFO1Q0D2I5 559 aa10.6□□□□□ -0.71
PTPRA-202ENST00000318266 MYO1EQ12965 1108 aa10.6□□□□□ -0.71
PTPRA-202ENST00000318266 PLCB4Q15147 1175 aa10.6□□□□□ -0.71
PTPRA-202ENST00000318266 WLSQ5T9L3 541 aa10.6□□□□□ -0.71
PTPRA-202ENST00000318266 SFMBT2Q5VUG0 894 aa10.6□□□□□ -0.71
PTPRA-202ENST00000318266 CNNM4Q6P4Q7 775 aa10.6□□□□□ -0.71
PTPRA-202ENST00000318266 MREGQ8N565 214 aa10.6□□□□□ -0.71
PTPRA-202ENST00000318266 RIOK1Q9BRS2 568 aaKnown RBP10.6□□□□□ -0.71
PTPRA-202ENST00000318266 CELF4Q9BZC1 486 aaKnown RBP10.6□□□□□ -0.71
PTPRA-202ENST00000318266 CCSER1Q9C0I3 900 aa10.6□□□□□ -0.71
PTPRA-202ENST00000318266 BTG4Q9NY30 223 aa10.6□□□□□ -0.71
PTPRA-202ENST00000318266 PPP1R1BQ9UD71 204 aaPredicted RBP10.6□□□□□ -0.71
PTPRA-202ENST00000318266 L3MBTL1Q9Y468 752 aa10.6□□□□□ -0.71
PTPRA-202ENST00000318266 GRID2IPA4D2P6 1211 aa10.6□□□□□ -0.71
PTPRA-202ENST00000318266 EIF4E1BA6NMX2 242 aaKnown RBP10.6□□□□□ -0.71
PTPRA-202ENST00000318266 LCA5LO95447 670 aa10.6□□□□□ -0.71
PTPRA-202ENST00000318266 ITGA4P13612 1032 aa10.6□□□□□ -0.71
PTPRA-202ENST00000318266 BYSLQ13895 437 aaKnown RBP10.6□□□□□ -0.71
PTPRA-202ENST00000318266 ASTE1Q2TB18 679 aaPredicted RBP10.6□□□□□ -0.71
PTPRA-202ENST00000318266 FAM133BQ5BKY9 247 aaKnown RBP10.6□□□□□ -0.71
PTPRA-202ENST00000318266 FAM83BQ5T0W9 1011 aa10.6□□□□□ -0.71
PTPRA-202ENST00000318266 UHMK1Q8TAS1 419 aaKnown RBP10.6□□□□□ -0.71
PTPRA-202ENST00000318266 STAMBPL1Q96FJ0 436 aa10.6□□□□□ -0.71
PTPRA-202ENST00000318266 SELENOSQ9BQE4 189 aa10.6□□□□□ -0.71
PTPRA-202ENST00000318266 PLCB1Q9NQ66 1216 aa10.6□□□□□ -0.71
PTPRA-202ENST00000318266 FLT1P17948 1338 aa10.6□□□□□ -0.71
PTPRA-202ENST00000318266 PAPPAQ13219 1627 aa10.59□□□□□ -0.71
PTPRA-202ENST00000318266 CCDC189A1A4V9 331 aa10.59□□□□□ -0.71
PTPRA-202ENST00000318266 HGSO14964 777 aaPredicted RBP10.59□□□□□ -0.71
PTPRA-202ENST00000318266 PJA2O43164 708 aa10.59□□□□□ -0.71
PTPRA-202ENST00000318266 SART1O43290 800 aaKnown RBP10.59□□□□□ -0.71
PTPRA-202ENST00000318266 BUB1BO60566 1050 aaPredicted RBP10.59□□□□□ -0.71
PTPRA-202ENST00000318266 CTNND1O60716 968 aaKnown RBP10.59□□□□□ -0.71
PTPRA-202ENST00000318266 ECHS1P30084 290 aa10.59□□□□□ -0.71
PTPRA-202ENST00000318266 KCNMA1Q12791 1236 aa10.59□□□□□ -0.71
PTPRA-202ENST00000318266 RPS6KA1Q15418 735 aa10.59□□□□□ -0.71
PTPRA-202ENST00000318266 FAM98CQ17RN3 349 aaKnown RBP10.59□□□□□ -0.71
PTPRA-202ENST00000318266 TBC1D1Q86TI0 1168 aaPredicted RBP10.59□□□□□ -0.71
PTPRA-202ENST00000318266 TEX11Q8IYF3 940 aa10.59□□□□□ -0.71
PTPRA-202ENST00000318266 VAT1LQ9HCJ6 419 aa10.59□□□□□ -0.71
PTPRA-202ENST00000318266 GOPCQ9HD26 462 aa10.59□□□□□ -0.71
PTPRA-202ENST00000318266 TSKSQ9UJT2 592 aa10.59□□□□□ -0.71
PTPRA-202ENST00000318266 ANAPC4Q9UJX5 808 aa10.59□□□□□ -0.71
PTPRA-202ENST00000318266 ATP8A1Q9Y2Q0 1164 aa10.59□□□□□ -0.71
PTPRA-202ENST00000318266 MYMKA6NI61 221 aa10.59□□□□□ -0.71
PTPRA-202ENST00000318266 TRAF5O00463 557 aa10.59□□□□□ -0.71
PTPRA-202ENST00000318266 OR52Z1P0C646 297 aa10.59□□□□□ -0.71
PTPRA-202ENST00000318266 PEX19P40855 299 aa10.59□□□□□ -0.71
PTPRA-202ENST00000318266 CHRNDQ07001 517 aa10.59□□□□□ -0.71
PTPRA-202ENST00000318266 DHX9Q08211 1270 aaKnown RBP10.59□□□□□ -0.71
PTPRA-202ENST00000318266 KLHL30Q0D2K2 578 aa10.59□□□□□ -0.71
PTPRA-202ENST00000318266 MEI1Q5TIA1 1274 aa10.59□□□□□ -0.71
PTPRA-202ENST00000318266 LRCH2Q5VUJ6 765 aa10.59□□□□□ -0.71
PTPRA-202ENST00000318266 NELFCDQ8IXH7 590 aa10.59□□□□□ -0.71
PTPRA-202ENST00000318266 RNF10Q8N5U6 811 aaKnown RBP10.59□□□□□ -0.71
PTPRA-202ENST00000318266 FAXDC2Q96IV6 333 aa10.59□□□□□ -0.71
PTPRA-202ENST00000318266 PNMA2Q9UL42 364 aa10.59□□□□□ -0.71
PTPRA-202ENST00000318266 KCPQ6ZWJ8 1503 aa10.58□□□□□ -0.72
PTPRA-202ENST00000318266 A0A1B0GUA9 196 aa10.58□□□□□ -0.72
PTPRA-202ENST00000318266 H0YGN5 161 aa10.58□□□□□ -0.72
PTPRA-202ENST00000318266 KIF5BP33176 963 aa10.58□□□□□ -0.72
PTPRA-202ENST00000318266 NAB2Q15742 525 aa10.58□□□□□ -0.72
PTPRA-202ENST00000318266 CENPPQ6IPU0 288 aa10.58□□□□□ -0.72
PTPRA-202ENST00000318266 DZIP3Q86Y13 1208 aaKnown RBP10.58□□□□□ -0.72
PTPRA-202ENST00000318266 PNMA1Q8ND90 353 aa10.58□□□□□ -0.72
PTPRA-202ENST00000318266 PIGBQ92521 554 aa10.58□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms