RNA–Protein interactions for RNA: ENST00000318023.11

CAPN3-201, Transcript of calpain 3, humanhuman

TSL 5 BASIC

Gene CAPN3, Length 3,172 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-201ENST00000318023 RRP36Q96EU6 259 aaKnown RBP10.39□□□□□ -0.75
CAPN3-201ENST00000318023 CAPZA3Q96KX2 299 aa10.39□□□□□ -0.75
CAPN3-201ENST00000318023 ZCWPW1Q9H0M4 648 aa10.39□□□□□ -0.75
CAPN3-201ENST00000318023 ADGRG1Q9Y653 693 aa10.39□□□□□ -0.75
CAPN3-201ENST00000318023 RANBP2P49792 3224 aaKnown RBP10.39□□□□□ -0.75
CAPN3-201ENST00000318023 DNAH12Q6ZR08 3092 aa10.39□□□□□ -0.75
CAPN3-201ENST00000318023 ENC1O14682 589 aa10.39□□□□□ -0.75
CAPN3-201ENST00000318023 ECEL1O95672 775 aa10.39□□□□□ -0.75
CAPN3-201ENST00000318023 RPS6KB1P23443 525 aa10.39□□□□□ -0.75
CAPN3-201ENST00000318023 SNAP25P60880 206 aa10.39□□□□□ -0.75
CAPN3-201ENST00000318023 GUCY1A3Q02108 690 aa10.39□□□□□ -0.75
CAPN3-201ENST00000318023 CAPRIN2Q6IMN6 1127 aaKnown RBP10.39□□□□□ -0.75
CAPN3-201ENST00000318023 FUKQ8N0W3 1084 aa10.39□□□□□ -0.75
CAPN3-201ENST00000318023 NSMCE1Q8WV22 266 aa10.39□□□□□ -0.75
CAPN3-201ENST00000318023 ARL8AQ96BM9 186 aa10.39□□□□□ -0.75
CAPN3-201ENST00000318023 NAPGQ99747 312 aaPredicted RBP10.39□□□□□ -0.75
CAPN3-201ENST00000318023 FBXO28Q9NVF7 368 aa10.39□□□□□ -0.75
CAPN3-201ENST00000318023 EEF2P13639 858 aaKnown RBP10.38□□□□□ -0.75
CAPN3-201ENST00000318023 MRPS25P82663 173 aaKnown RBP10.38□□□□□ -0.75
CAPN3-201ENST00000318023 RCSD1Q6JBY9 416 aa10.38□□□□□ -0.75
CAPN3-201ENST00000318023 RAB11FIP4Q86YS3 637 aa10.38□□□□□ -0.75
CAPN3-201ENST00000318023 KLHL23Q8NBE8 558 aa10.38□□□□□ -0.75
CAPN3-201ENST00000318023 STAMBPL1Q96FJ0 436 aa10.38□□□□□ -0.75
CAPN3-201ENST00000318023 ZFYVE28Q9HCC9 887 aa10.38□□□□□ -0.75
CAPN3-201ENST00000318023 HDAC6Q9UBN7 1215 aa10.38□□□□□ -0.75
CAPN3-201ENST00000318023 PAPPA2Q9BXP8 1791 aa10.38□□□□□ -0.75
CAPN3-201ENST00000318023 IKBKBO14920 756 aa10.38□□□□□ -0.75
CAPN3-201ENST00000318023 SRGAP2O75044 1071 aa10.38□□□□□ -0.75
CAPN3-201ENST00000318023 PSMA5P28066 241 aa10.38□□□□□ -0.75
CAPN3-201ENST00000318023 TM4SF4P48230 202 aa10.38□□□□□ -0.75
CAPN3-201ENST00000318023 BACE1P56817 501 aa10.38□□□□□ -0.75
CAPN3-201ENST00000318023 KIAA1755Q5JYT7 1200 aa10.38□□□□□ -0.75
CAPN3-201ENST00000318023 C1QTNF12Q5T7M4 302 aa10.38□□□□□ -0.75
CAPN3-201ENST00000318023 RUFY2Q8WXA3 655 aa10.38□□□□□ -0.75
CAPN3-201ENST00000318023 SH3GL2Q99962 352 aa10.38□□□□□ -0.75
CAPN3-201ENST00000318023 TACC3Q9Y6A5 838 aa10.38□□□□□ -0.75
CAPN3-201ENST00000318023 ARAP2Q8WZ64 1704 aa10.38□□□□□ -0.75
CAPN3-201ENST00000318023 TAL1P17542 331 aaPredicted RBP10.38□□□□□ -0.75
CAPN3-201ENST00000318023 GUCY1A2P33402 732 aa10.38□□□□□ -0.75
CAPN3-201ENST00000318023 TBX2Q13207 712 aaPredicted RBP10.38□□□□□ -0.75
CAPN3-201ENST00000318023 SPECC1LQ69YQ0 1117 aa10.38□□□□□ -0.75
CAPN3-201ENST00000318023 OR8K1Q8NGG5 319 aa10.38□□□□□ -0.75
CAPN3-201ENST00000318023 ARPP21Q9UBL0 812 aaPredicted RBP10.38□□□□□ -0.75
CAPN3-201ENST00000318023 MYO6Q9UM54 1294 aa10.38□□□□□ -0.75
CAPN3-201ENST00000318023 BAZ2AQ9UIF9 1905 aaKnown RBP10.37□□□□□ -0.75
CAPN3-201ENST00000318023 CA12O43570 354 aa10.37□□□□□ -0.75
CAPN3-201ENST00000318023 BUB1BO60566 1050 aaPredicted RBP10.37□□□□□ -0.75
CAPN3-201ENST00000318023 RASA1P20936 1047 aa10.37□□□□□ -0.75
CAPN3-201ENST00000318023 RANBP1P43487 201 aa10.37□□□□□ -0.75
CAPN3-201ENST00000318023 USP14P54578 494 aa10.37□□□□□ -0.75
CAPN3-201ENST00000318023 SLC8A3P57103 927 aa10.37□□□□□ -0.75
CAPN3-201ENST00000318023 APBA1Q02410 837 aa10.37□□□□□ -0.75
CAPN3-201ENST00000318023 ANKRD1Q15327 319 aa10.37□□□□□ -0.75
CAPN3-201ENST00000318023 WHAMMP3Q1A5X7 153 aa10.37□□□□□ -0.75
CAPN3-201ENST00000318023 SLC5A9Q2M3M2 681 aa10.37□□□□□ -0.75
CAPN3-201ENST00000318023 BZW1Q7L1Q6 419 aaKnown RBP10.37□□□□□ -0.75
CAPN3-201ENST00000318023 CPXCR1Q8N123 301 aa10.37□□□□□ -0.75
CAPN3-201ENST00000318023 RASSF8Q8NHQ8 419 aa10.37□□□□□ -0.75
CAPN3-201ENST00000318023 NUP133Q8WUM0 1156 aa10.37□□□□□ -0.75
CAPN3-201ENST00000318023 CEP95Q96GE4 821 aa10.37□□□□□ -0.75
CAPN3-201ENST00000318023 P2RX7Q99572 595 aaKnown RBP10.37□□□□□ -0.75
CAPN3-201ENST00000318023 EMILIN3Q9NT22 766 aa10.37□□□□□ -0.75
CAPN3-201ENST00000318023 LMCD1Q9NZU5 365 aa10.37□□□□□ -0.75
CAPN3-201ENST00000318023 ATXN2Q99700 1313 aaKnown RBP10.37□□□□□ -0.75
CAPN3-201ENST00000318023 B4E1Z4 1266 aa10.37□□□□□ -0.75
CAPN3-201ENST00000318023 SP3Q02447 781 aa10.37□□□□□ -0.75
CAPN3-201ENST00000318023 GABPAQ06546 454 aa10.37□□□□□ -0.75
CAPN3-201ENST00000318023 PNOCQ13519 176 aa10.37□□□□□ -0.75
CAPN3-201ENST00000318023 STK38Q15208 465 aa10.37□□□□□ -0.75
CAPN3-201ENST00000318023 TTMPQ5BVD1 217 aa10.37□□□□□ -0.75
CAPN3-201ENST00000318023 MICALCLQ6ZW33 695 aa10.37□□□□□ -0.75
CAPN3-201ENST00000318023 SND1Q7KZF4 910 aaKnown RBP eCLIP10.37□□□□□ -0.75
CAPN3-201ENST00000318023 KIAA1328Q86T90 577 aa10.37□□□□□ -0.75
CAPN3-201ENST00000318023 TBC1D10CQ8IV04 446 aa10.37□□□□□ -0.75
CAPN3-201ENST00000318023 ZNF473Q8WTR7 871 aaKnown RBP10.37□□□□□ -0.75
CAPN3-201ENST00000318023 ZNF396Q96N95 335 aaPredicted RBP10.37□□□□□ -0.75
CAPN3-201ENST00000318023 ASCC2Q9H1I8 757 aaPredicted RBP10.37□□□□□ -0.75
CAPN3-201ENST00000318023 CPVLQ9H3G5 476 aa10.37□□□□□ -0.75
CAPN3-201ENST00000318023 AS3MTQ9HBK9 375 aa10.37□□□□□ -0.75
CAPN3-201ENST00000318023 BAIAP2L1Q9UHR4 511 aa10.37□□□□□ -0.75
CAPN3-201ENST00000318023 CLIC4Q9Y696 253 aa10.37□□□□□ -0.75
CAPN3-201ENST00000318023 LAMA3Q16787 3333 aa10.36□□□□□ -0.75
CAPN3-201ENST00000318023 ZNF213O14771 459 aa10.36□□□□□ -0.75
CAPN3-201ENST00000318023 TBC1D12O60347 775 aa10.36□□□□□ -0.75
CAPN3-201ENST00000318023 FLOT1O75955 427 aa10.36□□□□□ -0.75
CAPN3-201ENST00000318023 TRMT44Q8IYL2 757 aaKnown RBP10.36□□□□□ -0.75
CAPN3-201ENST00000318023 DRAXINQ8NBI3 349 aaPredicted RBP10.36□□□□□ -0.75
CAPN3-201ENST00000318023 MMS19Q96T76 1030 aa10.36□□□□□ -0.75
CAPN3-201ENST00000318023 MCOLN1Q9GZU1 580 aa10.36□□□□□ -0.75
CAPN3-201ENST00000318023 RPAP3Q9H6T3 665 aaPredicted RBP10.36□□□□□ -0.75
CAPN3-201ENST00000318023 FKTNO75072 461 aa10.36□□□□□ -0.75
CAPN3-201ENST00000318023 COQ9O75208 318 aa10.36□□□□□ -0.75
CAPN3-201ENST00000318023 FAM163BP0C2L3 166 aa10.36□□□□□ -0.75
CAPN3-201ENST00000318023 LSP1P33241 339 aa10.36□□□□□ -0.75
CAPN3-201ENST00000318023 PSMC4P43686 418 aa10.36□□□□□ -0.75
CAPN3-201ENST00000318023 SOX10P56693 466 aa10.36□□□□□ -0.75
CAPN3-201ENST00000318023 PDE4BQ07343 736 aa10.36□□□□□ -0.75
CAPN3-201ENST00000318023 PDCD2Q16342 344 aaPredicted RBP10.36□□□□□ -0.75
CAPN3-201ENST00000318023 ADALQ6DHV7 355 aa10.36□□□□□ -0.75
CAPN3-201ENST00000318023 GPAT2Q6NUI2 795 aa10.36□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms