RNA–Protein interactions for RNA: ENST00000317633.13

SERF1A-201, Transcript of small EDRK-rich factor 1A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SERF1A, Length 963 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SERF1A-201ENST00000317633 WNT8BQ93098 351 aa23.17■■□□□ 1.3
SERF1A-201ENST00000317633 UHRF1Q96T88 793 aaPredicted RBP23.17■■□□□ 1.3
SERF1A-201ENST00000317633 LY9Q9HBG7 655 aa23.17■■□□□ 1.3
SERF1A-201ENST00000317633 TCF20Q9UGU0 1960 aaKnown RBP23.17■■□□□ 1.3
SERF1A-201ENST00000317633 DOCK5Q9H7D0 1870 aa23.17■■□□□ 1.3
SERF1A-201ENST00000317633 RSPH10B2B2RC85 870 aa23.16■■□□□ 1.3
SERF1A-201ENST00000317633 ARHGEF15O94989 841 aa23.16■■□□□ 1.3
SERF1A-201ENST00000317633 RSPH10BP0C881 870 aa23.16■■□□□ 1.3
SERF1A-201ENST00000317633 MCM5P33992 734 aa23.16■■□□□ 1.3
SERF1A-201ENST00000317633 TRAF7Q6Q0C0 670 aa23.16■■□□□ 1.3
SERF1A-201ENST00000317633 NFXL1Q6ZNB6 911 aa23.16■■□□□ 1.3
SERF1A-201ENST00000317633 CYFIP1Q7L576 1253 aa23.16■■□□□ 1.3
SERF1A-201ENST00000317633 RTEL1Q9NZ71 1219 aa23.16■■□□□ 1.3
SERF1A-201ENST00000317633 COG5Q9UP83 839 aa23.16■■□□□ 1.3
SERF1A-201ENST00000317633 TRANK1O15050 2925 aa23.16■■□□□ 1.3
SERF1A-201ENST00000317633 LCHNA4D1U4 455 aa23.15■■□□□ 1.3
SERF1A-201ENST00000317633 CCDC69A6NI79 296 aa23.15■■□□□ 1.3
SERF1A-201ENST00000317633 PIK3CDO00329 1044 aa23.15■■□□□ 1.3
SERF1A-201ENST00000317633 PRC1O43663 620 aa23.15■■□□□ 1.3
SERF1A-201ENST00000317633 SMIM10L2AP0DMW4 78 aa23.15■■□□□ 1.3
SERF1A-201ENST00000317633 SMIM10L2BP0DMW5 78 aa23.15■■□□□ 1.3
SERF1A-201ENST00000317633 GNAT1P11488 350 aa23.15■■□□□ 1.3
SERF1A-201ENST00000317633 IRX6P78412 446 aaPredicted RBP23.15■■□□□ 1.3
SERF1A-201ENST00000317633 GRB10Q13322 594 aa23.15■■□□□ 1.3
SERF1A-201ENST00000317633 HIC1Q14526 733 aa23.15■■□□□ 1.3
SERF1A-201ENST00000317633 PCNX4Q63HM2 1172 aa23.15■■□□□ 1.3
SERF1A-201ENST00000317633 TMCO2Q7Z6W1 182 aaPredicted RBP23.15■■□□□ 1.3
SERF1A-201ENST00000317633 NLRX1Q86UT6 975 aa23.15■■□□□ 1.3
SERF1A-201ENST00000317633 TMEM87BQ96K49 555 aa23.15■■□□□ 1.3
SERF1A-201ENST00000317633 ZNF215Q9UL58 517 aaPredicted RBP23.15■■□□□ 1.3
SERF1A-201ENST00000317633 MICAL3Q7RTP6 2002 aa23.15■■□□□ 1.3
SERF1A-201ENST00000317633 CAND2O75155 1236 aa23.14■■□□□ 1.29
SERF1A-201ENST00000317633 CALM1P0DP23 149 aa23.14■■□□□ 1.29
SERF1A-201ENST00000317633 CALM2P0DP24 149 aa23.14■■□□□ 1.29
SERF1A-201ENST00000317633 CALM3P0DP25 149 aa23.14■■□□□ 1.29
SERF1A-201ENST00000317633 HOXC8P31273 242 aa23.14■■□□□ 1.29
SERF1A-201ENST00000317633 MBTPS1Q14703 1052 aa23.14■■□□□ 1.29
SERF1A-201ENST00000317633 USP17L6PQ6QN14 398 aa23.14■■□□□ 1.29
SERF1A-201ENST00000317633 GIMAP8Q8ND71 665 aaPredicted RBP23.14■■□□□ 1.29
SERF1A-201ENST00000317633 SENP7Q9BQF6 1050 aa23.14■■□□□ 1.29
SERF1A-201ENST00000317633 MYL10Q9BUA6 226 aa23.14■■□□□ 1.29
SERF1A-201ENST00000317633 RNPEPQ9H4A4 650 aa23.14■■□□□ 1.29
SERF1A-201ENST00000317633 LMCD1Q9NZU5 365 aa23.14■■□□□ 1.29
SERF1A-201ENST00000317633 NCOR1O75376 2440 aa23.14■■□□□ 1.29
SERF1A-201ENST00000317633 COL4A4P53420 1690 aaPredicted RBP23.13■■□□□ 1.29
SERF1A-201ENST00000317633 AMHP03971 560 aa23.13■■□□□ 1.29
SERF1A-201ENST00000317633 TFF2Q03403 129 aa23.13■■□□□ 1.29
SERF1A-201ENST00000317633 TCTN1Q2MV58 587 aa23.13■■□□□ 1.29
SERF1A-201ENST00000317633 DBF4BQ8NFT6 615 aa23.13■■□□□ 1.29
SERF1A-201ENST00000317633 TGS1Q96RS0 853 aaKnown RBP23.13■■□□□ 1.29
SERF1A-201ENST00000317633 GPR20Q99678 358 aa23.13■■□□□ 1.29
SERF1A-201ENST00000317633 BCAS3Q9H6U6 928 aa23.13■■□□□ 1.29
SERF1A-201ENST00000317633 SIP14410 1827 aa23.12■■□□□ 1.29
SERF1A-201ENST00000317633 MEIS2O14770 477 aa23.12■■□□□ 1.29
SERF1A-201ENST00000317633 BMP1P13497 986 aa23.12■■□□□ 1.29
SERF1A-201ENST00000317633 LIFRP42702 1097 aa23.12■■□□□ 1.29
SERF1A-201ENST00000317633 KRT40Q6A162 431 aa23.12■■□□□ 1.29
SERF1A-201ENST00000317633 CDHR1Q96JP9 859 aa23.12■■□□□ 1.29
SERF1A-201ENST00000317633 INSL6Q9Y581 213 aa23.12■■□□□ 1.29
SERF1A-201ENST00000317633 SH2B2O14492 632 aaPredicted RBP23.11■■□□□ 1.29
SERF1A-201ENST00000317633 TREHO43280 583 aa23.11■■□□□ 1.29
SERF1A-201ENST00000317633 LPXNO60711 386 aa23.11■■□□□ 1.29
SERF1A-201ENST00000317633 ERVK-21P61565 698 aa23.11■■□□□ 1.29
SERF1A-201ENST00000317633 SEMA3FQ13275 785 aa23.11■■□□□ 1.29
SERF1A-201ENST00000317633 PLEKHG4Q58EX7 1191 aa23.11■■□□□ 1.29
SERF1A-201ENST00000317633 FAM117BQ6P1L5 589 aa23.11■■□□□ 1.29
SERF1A-201ENST00000317633 SEPT8Q92599 483 aa23.11■■□□□ 1.29
SERF1A-201ENST00000317633 HLA-CQ95604 372 aa23.11■■□□□ 1.29
SERF1A-201ENST00000317633 LSG1Q9H089 658 aaKnown RBP23.11■■□□□ 1.29
SERF1A-201ENST00000317633 LINC01553A4QN01 128 aa23.1■■□□□ 1.29
SERF1A-201ENST00000317633 PLEKHA8P1O95397 391 aa23.1■■□□□ 1.29
SERF1A-201ENST00000317633 SPRED2Q7Z698 418 aa23.1■■□□□ 1.29
SERF1A-201ENST00000317633 MYOCDQ8IZQ8 938 aa23.1■■□□□ 1.29
SERF1A-201ENST00000317633 SRBD1Q8N5C6 995 aaKnown RBP23.1■■□□□ 1.29
SERF1A-201ENST00000317633 PSTPIP2Q9H939 334 aa23.1■■□□□ 1.29
SERF1A-201ENST00000317633 SETD4Q9NVD3 440 aa23.1■■□□□ 1.29
SERF1A-201ENST00000317633 MTUS1Q9ULD2 1270 aa23.1■■□□□ 1.29
SERF1A-201ENST00000317633 SLC12A7Q9Y666 1083 aa23.1■■□□□ 1.29
SERF1A-201ENST00000317633 SLC27A2O14975 620 aa23.09■■□□□ 1.29
SERF1A-201ENST00000317633 UTP14CQ5TAP6 766 aaKnown RBP23.09■■□□□ 1.29
SERF1A-201ENST00000317633 LIN28BQ6ZN17 250 aaKnown RBP eCLIP23.09■■□□□ 1.29
SERF1A-201ENST00000317633 GDPD5Q8WTR4 605 aa23.09■■□□□ 1.29
SERF1A-201ENST00000317633 GPRASP2Q96D09 838 aa23.09■■□□□ 1.29
SERF1A-201ENST00000317633 SUGCTQ9HAC7 445 aa23.09■■□□□ 1.29
SERF1A-201ENST00000317633 KCNQ1P51787 676 aa23.08■■□□□ 1.29
SERF1A-201ENST00000317633 SP4Q02446 784 aa23.08■■□□□ 1.29
SERF1A-201ENST00000317633 ESYT1Q9BSJ8 1104 aa23.08■■□□□ 1.29
SERF1A-201ENST00000317633 REV3LO60673 3130 aa23.08■■□□□ 1.28
SERF1A-201ENST00000317633 NRCAMQ92823 1304 aa23.08■■□□□ 1.28
SERF1A-201ENST00000317633 SPDYE3A6NKU9 549 aa23.07■■□□□ 1.28
SERF1A-201ENST00000317633 CTSHP09668 335 aa23.07■■□□□ 1.28
SERF1A-201ENST00000317633 RXRAP19793 462 aa23.07■■□□□ 1.28
SERF1A-201ENST00000317633 HTRA4P83105 476 aaPredicted RBP23.07■■□□□ 1.28
SERF1A-201ENST00000317633 ARHGAP4P98171 946 aa23.07■■□□□ 1.28
SERF1A-201ENST00000317633 MKRN4PQ13434 485 aaPredicted RBP23.07■■□□□ 1.28
SERF1A-201ENST00000317633 CREB3L3Q68CJ9 461 aa23.07■■□□□ 1.28
SERF1A-201ENST00000317633 TRIM50Q86XT4 487 aa23.07■■□□□ 1.28
SERF1A-201ENST00000317633 CMTR1Q8N1G2 835 aaKnown RBP23.07■■□□□ 1.28
SERF1A-201ENST00000317633 APBB2Q92870 758 aa23.07■■□□□ 1.28
SERF1A-201ENST00000317633 ANO2Q9NQ90 1003 aa23.07■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms