RNA–Protein interactions for RNA: ENST00000315554.12

CDC42-201, Transcript of cell division cycle 42, humanhuman

APPRIS P5 TSL 1 (best) BASIC

Gene CDC42, Length 1,452 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42-201ENST00000315554 SP2Q02086 613 aa8.96□□□□□ -0.97
CDC42-201ENST00000315554 TTLL4Q14679 1199 aa8.96□□□□□ -0.97
CDC42-201ENST00000315554 LRRC41Q15345 812 aa8.96□□□□□ -0.97
CDC42-201ENST00000315554 INF2Q27J81 1249 aa8.96□□□□□ -0.97
CDC42-201ENST00000315554 DUSP28Q4G0W2 176 aa8.96□□□□□ -0.97
CDC42-201ENST00000315554 CCDC62Q6P9F0 684 aa8.96□□□□□ -0.97
CDC42-201ENST00000315554 PIK3AP1Q6ZUJ8 805 aa8.96□□□□□ -0.97
CDC42-201ENST00000315554 DIS3L2Q8IYB7 885 aaKnown RBP8.96□□□□□ -0.97
CDC42-201ENST00000315554 DAGLBQ8NCG7 672 aa8.96□□□□□ -0.97
CDC42-201ENST00000315554 OR6J1Q8NGC5 347 aa8.96□□□□□ -0.97
CDC42-201ENST00000315554 FERMT2Q96AC1 680 aa8.96□□□□□ -0.97
CDC42-201ENST00000315554 RNF25Q96BH1 459 aaPredicted RBP8.96□□□□□ -0.97
CDC42-201ENST00000315554 PAWRQ96IZ0 340 aaKnown RBP8.96□□□□□ -0.97
CDC42-201ENST00000315554 GNEQ9Y223 722 aaKnown RBP8.96□□□□□ -0.97
CDC42-201ENST00000315554 TELO2Q9Y4R8 837 aa8.96□□□□□ -0.97
CDC42-201ENST00000315554 UBIAD1Q9Y5Z9 338 aa8.96□□□□□ -0.97
CDC42-201ENST00000315554 CCDC194A0A1B0GVG4 234 aa8.96□□□□□ -0.98
CDC42-201ENST00000315554 KIF28PB7ZC32 967 aa8.96□□□□□ -0.98
CDC42-201ENST00000315554 FAM86B1E9PN63 330 aa8.96□□□□□ -0.98
CDC42-201ENST00000315554 CTAGE5O15320 804 aa8.96□□□□□ -0.98
CDC42-201ENST00000315554 EDIL3O43854 480 aa8.96□□□□□ -0.98
CDC42-201ENST00000315554 ATP9AO75110 1047 aa8.96□□□□□ -0.98
CDC42-201ENST00000315554 FAM86B2P0C5J1 330 aa8.96□□□□□ -0.98
CDC42-201ENST00000315554 ARP10275 920 aa8.96□□□□□ -0.98
CDC42-201ENST00000315554 UBA1P22314 1058 aaKnown RBP8.96□□□□□ -0.98
CDC42-201ENST00000315554 PTPN5P54829 565 aa8.96□□□□□ -0.98
CDC42-201ENST00000315554 SP4Q02446 784 aa8.96□□□□□ -0.98
CDC42-201ENST00000315554 CUL4AQ13619 759 aa8.96□□□□□ -0.98
CDC42-201ENST00000315554 NONOQ15233 471 aaKnown RBP eCLIP8.96□□□□□ -0.989e-8■■■■□ 26.4
CDC42-201ENST00000315554 GNPTABQ3T906 1256 aa8.96□□□□□ -0.98
CDC42-201ENST00000315554 IL27Q8NEV9 243 aa8.96□□□□□ -0.98
CDC42-201ENST00000315554 TBCKQ8TEA7 893 aa8.96□□□□□ -0.98
CDC42-201ENST00000315554 PPP1R13LQ8WUF5 828 aa8.96□□□□□ -0.98
CDC42-201ENST00000315554 PTCD2Q8WV60 388 aaKnown RBP8.96□□□□□ -0.98
CDC42-201ENST00000315554 SNX21Q969T3 373 aa8.96□□□□□ -0.98
CDC42-201ENST00000315554 INPP4AQ96PE3 977 aaPredicted RBP8.96□□□□□ -0.98
CDC42-201ENST00000315554 MXRA8Q9BRK3 442 aa8.96□□□□□ -0.98
CDC42-201ENST00000315554 AP5M1Q9H0R1 490 aa8.96□□□□□ -0.98
CDC42-201ENST00000315554 DDX41Q9UJV9 622 aaKnown RBP8.96□□□□□ -0.98
CDC42-201ENST00000315554 FRMPD3Q5JV73 1810 aa8.95□□□□□ -0.98
CDC42-201ENST00000315554 SPATA31C2B4DYI2 1134 aa8.95□□□□□ -0.98
CDC42-201ENST00000315554 KBTBD13C9JR72 458 aa8.95□□□□□ -0.98
CDC42-201ENST00000315554 DDX39AO00148 427 aaKnown RBP8.95□□□□□ -0.98
CDC42-201ENST00000315554 TDP2O95551 362 aa8.95□□□□□ -0.98
CDC42-201ENST00000315554 GGPS1O95749 300 aa8.95□□□□□ -0.98
CDC42-201ENST00000315554 GH1P01241 217 aa8.95□□□□□ -0.98
CDC42-201ENST00000315554 MYL3P08590 195 aa8.95□□□□□ -0.98
CDC42-201ENST00000315554 ATP2B1P20020 1258 aa8.95□□□□□ -0.98
CDC42-201ENST00000315554 GJA9P57773 515 aa8.95□□□□□ -0.98
CDC42-201ENST00000315554 CHMP4BP1P59074 171 aa8.95□□□□□ -0.98
CDC42-201ENST00000315554 ARHGAP1Q07960 439 aa8.95□□□□□ -0.98
CDC42-201ENST00000315554 MTMR1Q13613 665 aa8.95□□□□□ -0.98
CDC42-201ENST00000315554 KCNA10Q16322 511 aa8.95□□□□□ -0.98
CDC42-201ENST00000315554 FSCN1Q16658 493 aaKnown RBP8.95□□□□□ -0.98
CDC42-201ENST00000315554 GNASQ5JWF2 1037 aa8.95□□□□□ -0.98
CDC42-201ENST00000315554 GALNT17Q6IS24 598 aa8.95□□□□□ -0.98
CDC42-201ENST00000315554 XRRA1Q6P2D8 792 aa8.95□□□□□ -0.98
CDC42-201ENST00000315554 CYFIP1Q7L576 1253 aa8.95□□□□□ -0.98
CDC42-201ENST00000315554 KRT25Q7Z3Z0 450 aa8.95□□□□□ -0.98
CDC42-201ENST00000315554 RNF180Q86T96 592 aa8.95□□□□□ -0.98
CDC42-201ENST00000315554 NLRX1Q86UT6 975 aa8.95□□□□□ -0.98
CDC42-201ENST00000315554 PLA2G4DQ86XP0 818 aa8.95□□□□□ -0.98
CDC42-201ENST00000315554 HS6ST3Q8IZP7 471 aa8.95□□□□□ -0.98
CDC42-201ENST00000315554 ARRDC4Q8NCT1 418 aa8.95□□□□□ -0.98
CDC42-201ENST00000315554 AFG1LQ8WV93 481 aa8.95□□□□□ -0.98
CDC42-201ENST00000315554 CRYGNQ8WXF5 182 aa8.95□□□□□ -0.98
CDC42-201ENST00000315554 TNFRSF25Q93038 417 aa8.95□□□□□ -0.98
CDC42-201ENST00000315554 GJA10Q969M2 543 aa8.95□□□□□ -0.98
CDC42-201ENST00000315554 SENP6Q9GZR1 1112 aaPredicted RBP8.95□□□□□ -0.98
CDC42-201ENST00000315554 UPF3AQ9H1J1 476 aaKnown RBP8.95□□□□□ -0.98
CDC42-201ENST00000315554 BRMS1Q9HCU9 246 aa8.95□□□□□ -0.98
CDC42-201ENST00000315554 JADE2Q9NQC1 790 aa8.95□□□□□ -0.98
CDC42-201ENST00000315554 ZSCAN21Q9Y5A6 473 aaPredicted RBP8.95□□□□□ -0.98
CDC42-201ENST00000315554 WNT7AO00755 349 aa8.94□□□□□ -0.98
CDC42-201ENST00000315554 FIBPO43427 364 aa8.94□□□□□ -0.98
CDC42-201ENST00000315554 STAM2O75886 525 aa8.94□□□□□ -0.98
CDC42-201ENST00000315554 ASGR1P07306 291 aa8.94□□□□□ -0.98
CDC42-201ENST00000315554 CYP3A4P08684 503 aa8.94□□□□□ -0.98
CDC42-201ENST00000315554 GNL2Q13823 731 aaKnown RBP8.94□□□□□ -0.98
CDC42-201ENST00000315554 SAFBQ15424 915 aaKnown RBP eCLIP8.94□□□□□ -0.98
CDC42-201ENST00000315554 LETM2Q2VYF4 491 aa8.94□□□□□ -0.98
CDC42-201ENST00000315554 CEP55Q53EZ4 464 aa8.94□□□□□ -0.98
CDC42-201ENST00000315554 PRR16Q569H4 304 aa8.94□□□□□ -0.98
CDC42-201ENST00000315554 MCTP1Q6DN14 999 aa8.94□□□□□ -0.98
CDC42-201ENST00000315554 CXCL17Q6UXB2 119 aa8.94□□□□□ -0.98
CDC42-201ENST00000315554 FAM177A1Q8N128 213 aaPredicted RBP8.94□□□□□ -0.98
CDC42-201ENST00000315554 KLHDC9Q8NEP7 349 aa8.94□□□□□ -0.98
CDC42-201ENST00000315554 FBXO18Q8NFZ0 1043 aa8.94□□□□□ -0.98
CDC42-201ENST00000315554 GPRASP2Q96D09 838 aa8.94□□□□□ -0.98
CDC42-201ENST00000315554 SLC4A5Q9BY07 1137 aa8.94□□□□□ -0.98
CDC42-201ENST00000315554 C11orf49Q9H6J7 331 aa8.94□□□□□ -0.98
CDC42-201ENST00000315554 MLXIPQ9HAP2 919 aa8.94□□□□□ -0.98
CDC42-201ENST00000315554 SPC25Q9HBM1 224 aa8.94□□□□□ -0.98
CDC42-201ENST00000315554 KCNH7Q9NS40 1196 aa8.94□□□□□ -0.98
CDC42-201ENST00000315554 BCCIPQ9P287 314 aaKnown RBP eCLIP8.94□□□□□ -0.98
CDC42-201ENST00000315554 IGLV3-22A0A075B6J6 115 aa8.93□□□□□ -0.98
CDC42-201ENST00000315554 VPS37CA5D8V6 355 aaPredicted RBP8.93□□□□□ -0.98
CDC42-201ENST00000315554 H3BQV1 296 aa8.93□□□□□ -0.98
CDC42-201ENST00000315554 DNM1LO00429 736 aa8.93□□□□□ -0.98
CDC42-201ENST00000315554 MEIS1O00470 390 aa8.93□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms