RNA–Protein interactions for RNA: ENST00000312413.10

CLCN6-201, Transcript of chloride voltage-gated channel 6, humanhuman

TSL 2 BASIC

Gene CLCN6, Length 5,631 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN6-201ENST00000312413 PCDHA1Q9Y5I3 950 aa14.79□□□□□ -0.04
CLCN6-201ENST00000312413 KIF21AQ7Z4S6 1674 aa14.78□□□□□ -0.04
CLCN6-201ENST00000312413 POLGP54098 1239 aaPredicted RBP14.78□□□□□ -0.04
CLCN6-201ENST00000312413 IQCB1Q15051 598 aa14.78□□□□□ -0.04
CLCN6-201ENST00000312413 KMT5BQ4FZB7 885 aa14.78□□□□□ -0.04
CLCN6-201ENST00000312413 SARM1Q6SZW1 724 aa14.78□□□□□ -0.04
CLCN6-201ENST00000312413 MCF2L2Q86YR7 1114 aa14.78□□□□□ -0.04
CLCN6-201ENST00000312413 DNAAF3Q8N9W5 541 aa14.78□□□□□ -0.04
CLCN6-201ENST00000312413 IQANK1A0A1B0GTG1 560 aa14.78□□□□□ -0.04
CLCN6-201ENST00000312413 POLD1P28340 1107 aa14.78□□□□□ -0.04
CLCN6-201ENST00000312413 SKA2Q8WVK7 121 aaPredicted RBP14.78□□□□□ -0.04
CLCN6-201ENST00000312413 SUGCTQ9HAC7 445 aa14.78□□□□□ -0.04
CLCN6-201ENST00000312413 GCNT4Q9P109 453 aa14.78□□□□□ -0.04
CLCN6-201ENST00000312413 STOML1Q9UBI4 398 aa14.78□□□□□ -0.04
CLCN6-201ENST00000312413 TRIP13Q15645 432 aaPredicted RBP14.78□□□□□ -0.04
CLCN6-201ENST00000312413 MYLK4Q86YV6 388 aaPredicted RBP14.78□□□□□ -0.04
CLCN6-201ENST00000312413 COPRSQ9NQ92 184 aa14.78□□□□□ -0.04
CLCN6-201ENST00000312413 MMP1P03956 469 aa14.78□□□□□ -0.04
CLCN6-201ENST00000312413 ATP1A3P13637 1013 aa14.78□□□□□ -0.04
CLCN6-201ENST00000312413 HOXA7P31268 230 aaPredicted RBP14.78□□□□□ -0.04
CLCN6-201ENST00000312413 SPARCL1Q14515 664 aa14.78□□□□□ -0.04
CLCN6-201ENST00000312413 C4orf50Q6ZRC1 276 aa14.78□□□□□ -0.04
CLCN6-201ENST00000312413 SYCP2Q9BX26 1530 aa14.78□□□□□ -0.04
CLCN6-201ENST00000312413 GYG1P46976 350 aa14.77□□□□□ -0.04
CLCN6-201ENST00000312413 BBS9Q3SYG4 887 aa14.77□□□□□ -0.04
CLCN6-201ENST00000312413 TRMT10CQ7L0Y3 403 aaKnown RBP14.77□□□□□ -0.04
CLCN6-201ENST00000312413 ABCC2Q92887 1545 aa14.77□□□□□ -0.04
CLCN6-201ENST00000312413 GYG2O15488 501 aa14.77□□□□□ -0.04
CLCN6-201ENST00000312413 PLS3P13797 630 aa14.77□□□□□ -0.04
CLCN6-201ENST00000312413 BCAMP50895 628 aa14.77□□□□□ -0.04
CLCN6-201ENST00000312413 SPOPLQ6IQ16 392 aa14.77□□□□□ -0.04
CLCN6-201ENST00000312413 DARS2Q6PI48 645 aaKnown RBP14.77□□□□□ -0.04
CLCN6-201ENST00000312413 CENPUQ71F23 418 aa14.77□□□□□ -0.04
CLCN6-201ENST00000312413 PDIK1LQ8N165 341 aa14.77□□□□□ -0.04
CLCN6-201ENST00000312413 NDST4Q9H3R1 872 aa14.77□□□□□ -0.04
CLCN6-201ENST00000312413 XPO5Q9HAV4 1204 aaKnown RBP eCLIP14.77□□□□□ -0.04
CLCN6-201ENST00000312413 H0Y3Z8 333 aa14.77□□□□□ -0.05
CLCN6-201ENST00000312413 ACSL3O95573 720 aa14.77□□□□□ -0.05
CLCN6-201ENST00000312413 DYNLT1P63172 113 aa14.77□□□□□ -0.05
CLCN6-201ENST00000312413 POLA2Q14181 598 aa14.77□□□□□ -0.05
CLCN6-201ENST00000312413 DLGAP5Q15398 846 aa14.77□□□□□ -0.05
CLCN6-201ENST00000312413 LRRC24Q50LG9 513 aa14.77□□□□□ -0.05
CLCN6-201ENST00000312413 G3BP2Q9UN86 482 aaKnown RBP14.77□□□□□ -0.05
CLCN6-201ENST00000312413 SRPRBQ9Y5M8 271 aaKnown RBP14.77□□□□□ -0.05
CLCN6-201ENST00000312413 GTF2IP78347 998 aa14.77□□□□□ -0.05
CLCN6-201ENST00000312413 RESTQ13127 1097 aa14.77□□□□□ -0.05
CLCN6-201ENST00000312413 HP1BP3Q5SSJ5 553 aaPredicted RBP14.77□□□□□ -0.05
CLCN6-201ENST00000312413 DNAJC24Q6P3W2 148 aa14.77□□□□□ -0.05
CLCN6-201ENST00000312413 LARGE2Q8N3Y3 721 aa14.77□□□□□ -0.05
CLCN6-201ENST00000312413 CCNYQ8ND76 341 aa14.77□□□□□ -0.05
CLCN6-201ENST00000312413 PSPC1Q8WXF1 523 aaKnown RBP14.77□□□□□ -0.05
CLCN6-201ENST00000312413 CEP19Q96LK0 163 aa14.77□□□□□ -0.05
CLCN6-201ENST00000312413 TRIM55Q9BYV6 548 aa14.77□□□□□ -0.05
CLCN6-201ENST00000312413 YIPF3Q9GZM5 350 aa14.77□□□□□ -0.05
CLCN6-201ENST00000312413 BTG4Q9NY30 223 aa14.77□□□□□ -0.05
CLCN6-201ENST00000312413 FIS1Q9Y3D6 152 aa14.77□□□□□ -0.05
CLCN6-201ENST00000312413 PALM3A6NDB9 673 aaPredicted RBP14.77□□□□□ -0.05
CLCN6-201ENST00000312413 PYROXD1Q8WU10 500 aa14.77□□□□□ -0.05
CLCN6-201ENST00000312413 PODXLO00592 558 aa14.76□□□□□ -0.05
CLCN6-201ENST00000312413 GRAMD4Q6IC98 578 aa14.76□□□□□ -0.05
CLCN6-201ENST00000312413 TTLL7Q6ZT98 887 aa14.76□□□□□ -0.05
CLCN6-201ENST00000312413 ACCSQ96QU6 501 aa14.76□□□□□ -0.05
CLCN6-201ENST00000312413 TMEM60Q9H2L4 133 aa14.76□□□□□ -0.05
CLCN6-201ENST00000312413 GOLGA8SH3BPF8 625 aa14.76□□□□□ -0.05
CLCN6-201ENST00000312413 KRT10P13645 584 aa14.76□□□□□ -0.05
CLCN6-201ENST00000312413 GCFC2P16383 781 aaKnown RBP14.76□□□□□ -0.05
CLCN6-201ENST00000312413 CRLF3Q8IUI8 442 aa14.76□□□□□ -0.05
CLCN6-201ENST00000312413 PGBD1Q96JS3 809 aa14.76□□□□□ -0.05
CLCN6-201ENST00000312413 NRBP2Q9NSY0 501 aa14.76□□□□□ -0.05
CLCN6-201ENST00000312413 DBNLQ9UJU6 430 aaKnown RBP14.76□□□□□ -0.05
CLCN6-201ENST00000312413 ABL1P00519 1130 aa14.76□□□□□ -0.05
CLCN6-201ENST00000312413 ICA1Q05084 483 aa14.76□□□□□ -0.05
CLCN6-201ENST00000312413 SLFN13Q68D06 897 aa14.76□□□□□ -0.05
CLCN6-201ENST00000312413 ALKBH5Q6P6C2 394 aaKnown RBP14.76□□□□□ -0.05
CLCN6-201ENST00000312413 BBS5Q8N3I7 341 aa14.76□□□□□ -0.05
CLCN6-201ENST00000312413 MB21D1Q8N884 522 aa14.76□□□□□ -0.05
CLCN6-201ENST00000312413 RASGRP4Q8TDF6 673 aa14.76□□□□□ -0.05
CLCN6-201ENST00000312413 SLC24A3Q9HC58 644 aa14.76□□□□□ -0.05
CLCN6-201ENST00000312413 PNMA2Q9UL42 364 aa14.76□□□□□ -0.05
CLCN6-201ENST00000312413 A0A0G2JND7 137 aa14.76□□□□□ -0.05
CLCN6-201ENST00000312413 PSMD2Q13200 908 aa14.76□□□□□ -0.05
CLCN6-201ENST00000312413 SLC12A1Q13621 1099 aa14.76□□□□□ -0.05
CLCN6-201ENST00000312413 KRT31Q15323 416 aa14.76□□□□□ -0.05
CLCN6-201ENST00000312413 SUPT20HQ8NEM7 779 aa14.76□□□□□ -0.05
CLCN6-201ENST00000312413 CALN1Q9BXU9 219 aa14.76□□□□□ -0.05
CLCN6-201ENST00000312413 FGGP02679 453 aa14.75□□□□□ -0.05
CLCN6-201ENST00000312413 CHGBP05060 677 aa14.75□□□□□ -0.05
CLCN6-201ENST00000312413 PDE6BP35913 854 aa14.75□□□□□ -0.05
CLCN6-201ENST00000312413 DYNC1I2Q13409 638 aaKnown RBP14.75□□□□□ -0.05
CLCN6-201ENST00000312413 CERKLQ49MI3 558 aaPredicted RBP14.75□□□□□ -0.05
CLCN6-201ENST00000312413 POLR3CQ9BUI4 534 aaPredicted RBP14.75□□□□□ -0.05
CLCN6-201ENST00000312413 AMNQ9BXJ7 453 aa14.75□□□□□ -0.05
CLCN6-201ENST00000312413 ZC4H2Q9NQZ6 224 aa14.75□□□□□ -0.05
CLCN6-201ENST00000312413 CLIC2O15247 247 aa14.75□□□□□ -0.05
CLCN6-201ENST00000312413 NVLO15381 856 aaKnown RBP14.75□□□□□ -0.05
CLCN6-201ENST00000312413 MDM2Q00987 491 aaPredicted RBP14.75□□□□□ -0.05
CLCN6-201ENST00000312413 IFRD2Q12894 506 aaPredicted RBP14.75□□□□□ -0.05
CLCN6-201ENST00000312413 ZNF589Q86UQ0 364 aaPredicted RBP14.75□□□□□ -0.05
CLCN6-201ENST00000312413 WDR75Q8IWA0 830 aaKnown RBP14.75□□□□□ -0.05
CLCN6-201ENST00000312413 HIPK4Q8NE63 616 aa14.75□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms