RNA–Protein interactions for RNA: ENST00000309328.7

SSSCA1-201, Transcript of Sjogren syndrome/scleroderma autoantigen 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSSCA1, Length 698 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1-201ENST00000309328 FARP2O94887 1054 aaPredicted RBP20.26■□□□□ 0.83
SSSCA1-201ENST00000309328 PGK1P00558 417 aa20.26■□□□□ 0.83
SSSCA1-201ENST00000309328 ARP10275 920 aa20.26■□□□□ 0.83
SSSCA1-201ENST00000309328 KRT76Q01546 638 aa20.26■□□□□ 0.83
SSSCA1-201ENST00000309328 DGKDQ16760 1214 aa20.26■□□□□ 0.83
SSSCA1-201ENST00000309328 TTC38Q5R3I4 469 aa20.26■□□□□ 0.83
SSSCA1-201ENST00000309328 ANO1Q5XXA6 986 aa20.26■□□□□ 0.83
SSSCA1-201ENST00000309328 ZFP91Q96JP5 570 aaPredicted RBP20.26■□□□□ 0.83
SSSCA1-201ENST00000309328 MSH4O15457 936 aa20.25■□□□□ 0.83
SSSCA1-201ENST00000309328 EDIL3O43854 480 aa20.25■□□□□ 0.83
SSSCA1-201ENST00000309328 MARCH6O60337 910 aa20.25■□□□□ 0.83
SSSCA1-201ENST00000309328 GAS7O60861 476 aa20.25■□□□□ 0.83
SSSCA1-201ENST00000309328 HOXD8P13378 290 aaPredicted RBP20.25■□□□□ 0.83
SSSCA1-201ENST00000309328 SP2Q02086 613 aa20.25■□□□□ 0.83
SSSCA1-201ENST00000309328 CYFIP1Q7L576 1253 aa20.25■□□□□ 0.83
SSSCA1-201ENST00000309328 SMAP1Q8IYB5 467 aaPredicted RBP20.25■□□□□ 0.83
SSSCA1-201ENST00000309328 SPRYD3Q8NCJ5 442 aa20.25■□□□□ 0.83
SSSCA1-201ENST00000309328 ETNPPLQ8TBG4 499 aa20.25■□□□□ 0.83
SSSCA1-201ENST00000309328 SLC5A5Q92911 643 aa20.25■□□□□ 0.83
SSSCA1-201ENST00000309328 KCNMB3Q9NPA1 279 aa20.25■□□□□ 0.83
SSSCA1-201ENST00000309328 SLC9A2Q9UBY0 812 aa20.25■□□□□ 0.83
SSSCA1-201ENST00000309328 CEP131Q9UPN4 1083 aa20.25■□□□□ 0.83
SSSCA1-201ENST00000309328 FAM205CA6NFA0 338 aa20.24■□□□□ 0.83
SSSCA1-201ENST00000309328 ATP9AO75110 1047 aa20.24■□□□□ 0.83
SSSCA1-201ENST00000309328 ZSCAN22P10073 491 aaPredicted RBP20.24■□□□□ 0.83
SSSCA1-201ENST00000309328 CALCRLQ16602 461 aa20.24■□□□□ 0.83
SSSCA1-201ENST00000309328 LRCH2Q5VUJ6 765 aa20.24■□□□□ 0.83
SSSCA1-201ENST00000309328 ZNF746Q6NUN9 644 aaPredicted RBP20.24■□□□□ 0.83
SSSCA1-201ENST00000309328 RDM1Q8NG50 284 aa20.24■□□□□ 0.83
SSSCA1-201ENST00000309328 LENG1Q96BZ8 264 aaPredicted RBP20.24■□□□□ 0.83
SSSCA1-201ENST00000309328 TEKT3Q9BXF9 490 aa20.24■□□□□ 0.83
SSSCA1-201ENST00000309328 ATP6V1DQ9Y5K8 247 aa20.24■□□□□ 0.83
SSSCA1-201ENST00000309328 BRCA2P51587 3418 aa20.24■□□□□ 0.83
SSSCA1-201ENST00000309328 KIAA1217Q5T5P2 1943 aa20.23■□□□□ 0.83
SSSCA1-201ENST00000309328 SLC37A4O43826 429 aa20.23■□□□□ 0.83
SSSCA1-201ENST00000309328 MMP3P08254 477 aa20.23■□□□□ 0.83
SSSCA1-201ENST00000309328 SFNP31947 248 aa20.23■□□□□ 0.83
SSSCA1-201ENST00000309328 NUCB2P80303 420 aa20.23■□□□□ 0.83
SSSCA1-201ENST00000309328 RESTQ13127 1097 aa20.23■□□□□ 0.83
SSSCA1-201ENST00000309328 GJC2Q5T442 439 aaPredicted RBP20.23■□□□□ 0.83
SSSCA1-201ENST00000309328 AFG1LQ8WV93 481 aa20.23■□□□□ 0.83
SSSCA1-201ENST00000309328 SEPT1Q8WYJ6 367 aa20.23■□□□□ 0.83
SSSCA1-201ENST00000309328 COPS5Q92905 334 aa20.23■□□□□ 0.83
SSSCA1-201ENST00000309328 KATNAL1Q9BW62 490 aa20.23■□□□□ 0.83
SSSCA1-201ENST00000309328 PHF24Q9UPV7 400 aa20.23■□□□□ 0.83
SSSCA1-201ENST00000309328 CTAGE5O15320 804 aa20.22■□□□□ 0.83
SSSCA1-201ENST00000309328 ATP2B1P20020 1258 aa20.22■□□□□ 0.83
SSSCA1-201ENST00000309328 MCM7P33993 719 aa20.22■□□□□ 0.83
SSSCA1-201ENST00000309328 ITGB3BPQ13352 177 aaPredicted RBP20.22■□□□□ 0.83
SSSCA1-201ENST00000309328 KCNA10Q16322 511 aa20.22■□□□□ 0.83
SSSCA1-201ENST00000309328 ATL3Q6DD88 541 aa20.22■□□□□ 0.83
SSSCA1-201ENST00000309328 CCSAPQ6IQ19 270 aaPredicted RBP20.22■□□□□ 0.83
SSSCA1-201ENST00000309328 NECAB2Q7Z6G3 386 aa20.22■□□□□ 0.83
SSSCA1-201ENST00000309328 FERMT3Q86UX7 667 aa20.22■□□□□ 0.83
SSSCA1-201ENST00000309328 GLT1D1Q96MS3 346 aa20.22■□□□□ 0.83
SSSCA1-201ENST00000309328 RBM19Q9Y4C8 960 aaKnown RBP20.22■□□□□ 0.83
SSSCA1-201ENST00000309328 ELP1O95163 1332 aa20.22■□□□□ 0.83
SSSCA1-201ENST00000309328 KIAA0100Q14667 2235 aaKnown RBP20.21■□□□□ 0.83
SSSCA1-201ENST00000309328 POTEFA5A3E0 1075 aa20.21■□□□□ 0.83
SSSCA1-201ENST00000309328 WDR64B1ANS9 1081 aa20.21■□□□□ 0.83
SSSCA1-201ENST00000309328 DHX15O43143 795 aaKnown RBP20.21■□□□□ 0.83
SSSCA1-201ENST00000309328 CAPN15O75808 1086 aa20.21■□□□□ 0.83
SSSCA1-201ENST00000309328 PSMD10O75832 226 aa20.21■□□□□ 0.83
SSSCA1-201ENST00000309328 OR52Z1P0C646 297 aa20.21■□□□□ 0.83
SSSCA1-201ENST00000309328 TOB1P50616 345 aaPredicted RBP20.21■□□□□ 0.83
SSSCA1-201ENST00000309328 JAK3P52333 1124 aa20.21■□□□□ 0.83
SSSCA1-201ENST00000309328 ACLYP53396 1101 aa20.21■□□□□ 0.83
SSSCA1-201ENST00000309328 HSDL1Q3SXM5 330 aa20.21■□□□□ 0.83
SSSCA1-201ENST00000309328 POTEDQ86YR6 584 aa20.21■□□□□ 0.83
SSSCA1-201ENST00000309328 TNPO1Q92973 898 aaKnown RBP20.21■□□□□ 0.83
SSSCA1-201ENST00000309328 GPR20Q99678 358 aa20.21■□□□□ 0.83
SSSCA1-201ENST00000309328 MTG1Q9BT17 334 aaPredicted RBP20.21■□□□□ 0.83
SSSCA1-201ENST00000309328 RAB34Q9BZG1 259 aa20.21■□□□□ 0.83
SSSCA1-201ENST00000309328 TSHZ2Q9NRE2 1034 aa20.21■□□□□ 0.83
SSSCA1-201ENST00000309328 PKD2L1Q9P0L9 805 aa20.21■□□□□ 0.83
SSSCA1-201ENST00000309328 ZNF215Q9UL58 517 aaPredicted RBP20.21■□□□□ 0.83
SSSCA1-201ENST00000309328 CIZ1Q9ULV3 898 aaPredicted RBP20.21■□□□□ 0.83
SSSCA1-201ENST00000309328 MYH7BA7E2Y1 1941 aa20.21■□□□□ 0.83
SSSCA1-201ENST00000309328 BRD1O95696 1058 aa20.2■□□□□ 0.82
SSSCA1-201ENST00000309328 F13A1P00488 732 aa20.2■□□□□ 0.82
SSSCA1-201ENST00000309328 MYCNP04198 464 aaPredicted RBP20.2■□□□□ 0.82
SSSCA1-201ENST00000309328 ASGR1P07306 291 aa20.2■□□□□ 0.82
SSSCA1-201ENST00000309328 PRPHP41219 470 aa20.2■□□□□ 0.82
SSSCA1-201ENST00000309328 SLC26A2P50443 739 aa20.2■□□□□ 0.82
SSSCA1-201ENST00000309328 PPP2R5CQ13362 524 aa20.2■□□□□ 0.82
SSSCA1-201ENST00000309328 TMEM266Q2M3C6 531 aa20.2■□□□□ 0.82
SSSCA1-201ENST00000309328 TMEM63BQ5T3F8 832 aa20.2■□□□□ 0.82
SSSCA1-201ENST00000309328 MIS18BP1Q6P0N0 1132 aa20.2■□□□□ 0.82
SSSCA1-201ENST00000309328 ZNF396Q96N95 335 aaPredicted RBP20.2■□□□□ 0.82
SSSCA1-201ENST00000309328 MTMR9Q96QG7 549 aa20.2■□□□□ 0.82
SSSCA1-201ENST00000309328 AZI2Q9H6S1 392 aa20.2■□□□□ 0.82
SSSCA1-201ENST00000309328 EIF4ENIF1Q9NRA8 985 aaKnown RBP20.2■□□□□ 0.82
SSSCA1-201ENST00000309328 PCDHA12Q9UN75 941 aa20.2■□□□□ 0.82
SSSCA1-201ENST00000309328 PCDHA10Q9Y5I2 948 aa20.2■□□□□ 0.82
SSSCA1-201ENST00000309328 STK24Q9Y6E0 443 aa20.2■□□□□ 0.82
SSSCA1-201ENST00000309328 ATG7O95352 703 aa20.19■□□□□ 0.82
SSSCA1-201ENST00000309328 EN2P19622 333 aaPredicted RBP20.19■□□□□ 0.82
SSSCA1-201ENST00000309328 ACTR2P61160 394 aa20.19■□□□□ 0.82
SSSCA1-201ENST00000309328 PURAQ00577 322 aaKnown RBP20.19■□□□□ 0.82
SSSCA1-201ENST00000309328 BEX3Q00994 111 aa20.19■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms