RNA–Protein interactions for RNA: ENST00000309285.3

XCR1-201, Transcript of X-C motif chemokine receptor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene XCR1, Length 5,281 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XCR1-201ENST00000309285 KCTD1Q719H9 257 aa10.13□□□□□ -0.79
XCR1-201ENST00000309285 SLC35F6Q8N357 371 aa10.13□□□□□ -0.79
XCR1-201ENST00000309285 C5P01031 1676 aa10.12□□□□□ -0.79
XCR1-201ENST00000309285 SPATA31A6Q5VVP1 1343 aa10.12□□□□□ -0.79
XCR1-201ENST00000309285 ENC1O14682 589 aa10.12□□□□□ -0.79
XCR1-201ENST00000309285 PPIP5K2O43314 1243 aa10.12□□□□□ -0.79
XCR1-201ENST00000309285 RPL13P26373 211 aaKnown RBP10.12□□□□□ -0.79
XCR1-201ENST00000309285 CERKLQ49MI3 558 aaPredicted RBP10.12□□□□□ -0.79
XCR1-201ENST00000309285 NCAPH2Q6IBW4 605 aa10.12□□□□□ -0.79
XCR1-201ENST00000309285 CCDC26Q8TAB7 109 aa10.12□□□□□ -0.79
XCR1-201ENST00000309285 MAP3K14Q99558 947 aa10.12□□□□□ -0.79
XCR1-201ENST00000309285 PSTPIP2Q9H939 334 aa10.12□□□□□ -0.79
XCR1-201ENST00000309285 FRMD4BQ9Y2L6 1034 aa10.12□□□□□ -0.79
XCR1-201ENST00000309285 CREB3O43889 395 aa10.12□□□□□ -0.79
XCR1-201ENST00000309285 TTLL1O95922 423 aa10.12□□□□□ -0.79
XCR1-201ENST00000309285 MYO1EQ12965 1108 aa10.12□□□□□ -0.79
XCR1-201ENST00000309285 VSTM4Q8IW00 320 aa10.12□□□□□ -0.79
XCR1-201ENST00000309285 ANKRD42Q8N9B4 389 aa10.12□□□□□ -0.79
XCR1-201ENST00000309285 MRRFQ96E11 262 aaKnown RBP10.12□□□□□ -0.79
XCR1-201ENST00000309285 TUBE1Q9UJT0 475 aa10.12□□□□□ -0.79
XCR1-201ENST00000309285 USP17L5A8MUK1 530 aa10.12□□□□□ -0.79
XCR1-201ENST00000309285 KCNJ18B7U540 433 aa10.12□□□□□ -0.79
XCR1-201ENST00000309285 PDCLQ13371 301 aa10.12□□□□□ -0.79
XCR1-201ENST00000309285 KCNJ12Q14500 433 aa10.12□□□□□ -0.79
XCR1-201ENST00000309285 FLAD1Q8NFF5 587 aa10.12□□□□□ -0.79
XCR1-201ENST00000309285 SMCR8Q8TEV9 937 aaPredicted RBP10.12□□□□□ -0.79
XCR1-201ENST00000309285 DPF2Q92785 391 aa10.12□□□□□ -0.79
XCR1-201ENST00000309285 NOC4LQ9BVI4 516 aaKnown RBP10.12□□□□□ -0.79
XCR1-201ENST00000309285 NPR1P16066 1061 aa10.12□□□□□ -0.79
XCR1-201ENST00000309285 FAM133BQ5BKY9 247 aaKnown RBP10.12□□□□□ -0.79
XCR1-201ENST00000309285 HERC4Q5GLZ8 1057 aaPredicted RBP10.12□□□□□ -0.79
XCR1-201ENST00000309285 CNNM4Q6P4Q7 775 aa10.12□□□□□ -0.79
XCR1-201ENST00000309285 PHLDB2Q86SQ0 1253 aa10.12□□□□□ -0.79
XCR1-201ENST00000309285 KSR1Q8IVT5 923 aa10.12□□□□□ -0.79
XCR1-201ENST00000309285 NKX2-3Q8TAU0 364 aa10.12□□□□□ -0.79
XCR1-201ENST00000309285 LMBR1Q8WVP7 490 aa10.12□□□□□ -0.79
XCR1-201ENST00000309285 RNF34Q969K3 372 aa10.12□□□□□ -0.79
XCR1-201ENST00000309285 FAM196BA6NMK8 535 aa10.11□□□□□ -0.79
XCR1-201ENST00000309285 PRPHP41219 470 aa10.11□□□□□ -0.79
XCR1-201ENST00000309285 GRM4Q14833 912 aa10.11□□□□□ -0.79
XCR1-201ENST00000309285 DLGAP5Q15398 846 aa10.11□□□□□ -0.79
XCR1-201ENST00000309285 SLC27A3Q5K4L6 730 aa10.11□□□□□ -0.79
XCR1-201ENST00000309285 ARL6IP4Q66PJ3 421 aaKnown RBP10.11□□□□□ -0.79
XCR1-201ENST00000309285 BEGAINQ9BUH8 593 aa10.11□□□□□ -0.79
XCR1-201ENST00000309285 ARHGEF35A5YM69 484 aa10.11□□□□□ -0.79
XCR1-201ENST00000309285 PP2D1A8MPX8 630 aa10.11□□□□□ -0.79
XCR1-201ENST00000309285 GYS1P13807 737 aa10.11□□□□□ -0.79
XCR1-201ENST00000309285 CALCOCO2Q13137 446 aa10.11□□□□□ -0.79
XCR1-201ENST00000309285 CUL4BQ13620 913 aa10.11□□□□□ -0.79
XCR1-201ENST00000309285 PPP2R5DQ14738 602 aa10.11□□□□□ -0.79
XCR1-201ENST00000309285 GPR162Q16538 588 aa10.11□□□□□ -0.79
XCR1-201ENST00000309285 BRDTQ58F21 947 aaPredicted RBP10.11□□□□□ -0.79
XCR1-201ENST00000309285 TBC1D1Q86TI0 1168 aaPredicted RBP10.11□□□□□ -0.79
XCR1-201ENST00000309285 MKL2Q9ULH7 1088 aa10.11□□□□□ -0.79
XCR1-201ENST00000309285 G3BP2Q9UN86 482 aaKnown RBP10.11□□□□□ -0.79
XCR1-201ENST00000309285 CNTNAP5Q8WYK1 1306 aa10.11□□□□□ -0.79
XCR1-201ENST00000309285 STX10O60499 249 aa10.11□□□□□ -0.79
XCR1-201ENST00000309285 ATP2C1P98194 919 aaPredicted RBP10.11□□□□□ -0.79
XCR1-201ENST00000309285 ASPRV1Q53RT3 343 aa10.11□□□□□ -0.79
XCR1-201ENST00000309285 CLEC10AQ8IUN9 316 aa10.11□□□□□ -0.79
XCR1-201ENST00000309285 CCDC197Q8NCU1 140 aa10.11□□□□□ -0.79
XCR1-201ENST00000309285 NEDD1Q8NHV4 660 aa10.11□□□□□ -0.79
XCR1-201ENST00000309285 RAB3IPQ96QF0 476 aaPredicted RBP10.11□□□□□ -0.79
XCR1-201ENST00000309285 NUF2Q9BZD4 464 aa10.11□□□□□ -0.79
XCR1-201ENST00000309285 SATB2Q9UPW6 733 aa10.11□□□□□ -0.79
XCR1-201ENST00000309285 GDAQ9Y2T3 454 aa10.11□□□□□ -0.79
XCR1-201ENST00000309285 PCDHA1Q9Y5I3 950 aa10.11□□□□□ -0.79
XCR1-201ENST00000309285 MARF1Q9Y4F3 1742 aaKnown RBP10.11□□□□□ -0.79
XCR1-201ENST00000309285 hCG_2014768A0A024R1R8 64 aa10.11□□□□□ -0.79
XCR1-201ENST00000309285 SMTNP53814 917 aa10.11□□□□□ -0.79
XCR1-201ENST00000309285 EVX2Q03828 476 aa10.11□□□□□ -0.79
XCR1-201ENST00000309285 ICA1Q05084 483 aa10.11□□□□□ -0.79
XCR1-201ENST00000309285 CFAP221Q4G0U5 840 aa10.11□□□□□ -0.79
XCR1-201ENST00000309285 WDR44Q5JSH3 913 aa10.11□□□□□ -0.79
XCR1-201ENST00000309285 KLHL29Q96CT2 875 aa10.11□□□□□ -0.79
XCR1-201ENST00000309285 OSBPL5Q9H0X9 879 aaPredicted RBP10.11□□□□□ -0.79
XCR1-201ENST00000309285 HPSEQ9Y251 543 aa10.11□□□□□ -0.79
XCR1-201ENST00000309285 SPOPO43791 374 aa10.1□□□□□ -0.79
XCR1-201ENST00000309285 CEP104O60308 925 aa10.1□□□□□ -0.79
XCR1-201ENST00000309285 IFNAR2P48551 515 aa10.1□□□□□ -0.79
XCR1-201ENST00000309285 SLFN13Q68D06 897 aa10.1□□□□□ -0.79
XCR1-201ENST00000309285 CCDC117Q8IWD4 279 aaPredicted RBP10.1□□□□□ -0.79
XCR1-201ENST00000309285 RDH13Q8NBN7 331 aa10.1□□□□□ -0.79
XCR1-201ENST00000309285 THOC1Q96FV9 657 aaKnown RBP10.1□□□□□ -0.79
XCR1-201ENST00000309285 PAGR1Q9BTK6 254 aa10.1□□□□□ -0.79
XCR1-201ENST00000309285 ACTR5Q9H9F9 607 aaPredicted RBP10.1□□□□□ -0.79
XCR1-201ENST00000309285 KLHL14Q9P2G3 628 aa10.1□□□□□ -0.79
XCR1-201ENST00000309285 PCDHA12Q9UN75 941 aa10.1□□□□□ -0.79
XCR1-201ENST00000309285 ARFGEF2Q9Y6D5 1785 aa10.1□□□□□ -0.79
XCR1-201ENST00000309285 SORBS3O60504 671 aa10.1□□□□□ -0.79
XCR1-201ENST00000309285 BAG2O95816 211 aa10.1□□□□□ -0.79
XCR1-201ENST00000309285 RASA1P20936 1047 aa10.1□□□□□ -0.79
XCR1-201ENST00000309285 PHLDB3Q6NSJ2 640 aa10.1□□□□□ -0.79
XCR1-201ENST00000309285 NELFCDQ8IXH7 590 aa10.1□□□□□ -0.79
XCR1-201ENST00000309285 SLC39A2Q9NP94 309 aa10.1□□□□□ -0.79
XCR1-201ENST00000309285 SH3GLB2Q9NR46 395 aa10.1□□□□□ -0.79
XCR1-201ENST00000309285 DISC1Q9NRI5 854 aa10.1□□□□□ -0.79
XCR1-201ENST00000309285 BARHL2Q9NY43 387 aa10.1□□□□□ -0.79
XCR1-201ENST00000309285 SCOCQ9UIL1 159 aa10.1□□□□□ -0.79
XCR1-201ENST00000309285 FLT1P17948 1338 aa10.1□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms