RNA–Protein interactions for RNA: ENST00000308077.9

PTCD2-201, Transcript of pentatricopeptide repeat domain 2, humanhuman

TSL 1 (best)

Gene PTCD2, Length 2,195 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD2-201ENST00000308077 VAV3Q9UKW4 847 aa7.83□□□□□ -1.16
PTCD2-201ENST00000308077 UBIAD1Q9Y5Z9 338 aa7.83□□□□□ -1.16
PTCD2-201ENST00000308077 LRRC37A2A6NM11 1700 aa7.83□□□□□ -1.16
PTCD2-201ENST00000308077 KIAA1217Q5T5P2 1943 aa7.83□□□□□ -1.16
PTCD2-201ENST00000308077 PSMD10O75832 226 aa7.83□□□□□ -1.16
PTCD2-201ENST00000308077 CETPP11597 493 aa7.83□□□□□ -1.16
PTCD2-201ENST00000308077 VASPP50552 380 aaPredicted RBP7.83□□□□□ -1.16
PTCD2-201ENST00000308077 HUNKP57058 714 aa7.83□□□□□ -1.16
PTCD2-201ENST00000308077 NLRP12P59046 1061 aa7.83□□□□□ -1.16
PTCD2-201ENST00000308077 PABPC4Q13310 644 aaKnown RBP eCLIP7.83□□□□□ -1.16
PTCD2-201ENST00000308077 TMEM119Q4V9L6 283 aa7.83□□□□□ -1.16
PTCD2-201ENST00000308077 RASSF8Q8NHQ8 419 aa7.83□□□□□ -1.16
PTCD2-201ENST00000308077 FAM200AQ8TCP9 573 aa7.83□□□□□ -1.16
PTCD2-201ENST00000308077 SLC5A5Q92911 643 aa7.83□□□□□ -1.16
PTCD2-201ENST00000308077 WDR11Q9BZH6 1224 aa7.83□□□□□ -1.16
PTCD2-201ENST00000308077 BLZF1Q9H2G9 400 aa7.83□□□□□ -1.16
PTCD2-201ENST00000308077 BLOC1S4Q9NUP1 217 aa7.83□□□□□ -1.16
PTCD2-201ENST00000308077 ANO10Q9NW15 660 aa7.83□□□□□ -1.16
PTCD2-201ENST00000308077 MAN1B1Q9UKM7 699 aa7.83□□□□□ -1.16
PTCD2-201ENST00000308077 RABGAP1Q9Y3P9 1069 aa7.83□□□□□ -1.16
PTCD2-201ENST00000308077 ASTN1O14525 1302 aa7.82□□□□□ -1.16
PTCD2-201ENST00000308077 TTC28Q96AY4 2481 aa7.82□□□□□ -1.16
PTCD2-201ENST00000308077 PDHXO00330 501 aa7.82□□□□□ -1.16
PTCD2-201ENST00000308077 EML1O00423 815 aa7.82□□□□□ -1.16
PTCD2-201ENST00000308077 MED24O75448 989 aa7.82□□□□□ -1.16
PTCD2-201ENST00000308077 ZBTB48P10074 688 aaPredicted RBP7.82□□□□□ -1.16
PTCD2-201ENST00000308077 BCRP11274 1271 aa7.82□□□□□ -1.16
PTCD2-201ENST00000308077 MYCLP12524 364 aaPredicted RBP7.82□□□□□ -1.16
PTCD2-201ENST00000308077 ERCC3P19447 782 aa7.82□□□□□ -1.16
PTCD2-201ENST00000308077 SETQ01105 290 aaPredicted RBP7.82□□□□□ -1.16
PTCD2-201ENST00000308077 CUL4BQ13620 913 aa7.82□□□□□ -1.16
PTCD2-201ENST00000308077 IQCB1Q15051 598 aa7.82□□□□□ -1.16
PTCD2-201ENST00000308077 HYIQ5T013 277 aa7.82□□□□□ -1.16
PTCD2-201ENST00000308077 ARHGEF16Q5VV41 709 aa7.82□□□□□ -1.16
PTCD2-201ENST00000308077 KRT79Q5XKE5 535 aa7.82□□□□□ -1.16
PTCD2-201ENST00000308077 NCAPH2Q6IBW4 605 aa7.82□□□□□ -1.16
PTCD2-201ENST00000308077 POTEHQ6S545 545 aa7.82□□□□□ -1.16
PTCD2-201ENST00000308077 KCNK18Q7Z418 384 aa7.82□□□□□ -1.16
PTCD2-201ENST00000308077 LUZP1Q86V48 1076 aa7.82□□□□□ -1.16
PTCD2-201ENST00000308077 NCAPG2Q86XI2 1143 aa7.82□□□□□ -1.16
PTCD2-201ENST00000308077 RASAL3Q86YV0 1011 aa7.82□□□□□ -1.16
PTCD2-201ENST00000308077 FAM43AQ8N2R8 423 aa7.82□□□□□ -1.16
PTCD2-201ENST00000308077 SMARCE1Q969G3 411 aa7.82□□□□□ -1.16
PTCD2-201ENST00000308077 CALML4Q96GE6 196 aa7.82□□□□□ -1.16
PTCD2-201ENST00000308077 LRCH3Q96II8 777 aa7.82□□□□□ -1.16
PTCD2-201ENST00000308077 PTPN18Q99952 460 aa7.82□□□□□ -1.16
PTCD2-201ENST00000308077 MAF1Q9H063 256 aa7.82□□□□□ -1.16
PTCD2-201ENST00000308077 KBTBD4Q9NVX7 518 aa7.82□□□□□ -1.16
PTCD2-201ENST00000308077 HOOK1Q9UJC3 728 aaKnown RBP7.82□□□□□ -1.16
PTCD2-201ENST00000308077 ABT1Q9ULW3 272 aaKnown RBP7.82□□□□□ -1.16
PTCD2-201ENST00000308077 ZNFX1Q9P2E3 1918 aaKnown RBP7.82□□□□□ -1.16
PTCD2-201ENST00000308077 POTEB3A0JP26 581 aa7.81□□□□□ -1.16
PTCD2-201ENST00000308077 GTPBP6O43824 516 aaPredicted RBP7.81□□□□□ -1.16
PTCD2-201ENST00000308077 ZNF165P49910 485 aa7.81□□□□□ -1.16
PTCD2-201ENST00000308077 CNTN2Q02246 1040 aa7.81□□□□□ -1.16
PTCD2-201ENST00000308077 MORC3Q14149 939 aa7.81□□□□□ -1.16
PTCD2-201ENST00000308077 LRCH2Q5VUJ6 765 aa7.81□□□□□ -1.16
PTCD2-201ENST00000308077 POTEBQ6S5H4 581 aa7.81□□□□□ -1.16
PTCD2-201ENST00000308077 B3GNT9Q6UX72 402 aa7.81□□□□□ -1.16
PTCD2-201ENST00000308077 OTOP1Q7RTM1 612 aa7.81□□□□□ -1.16
PTCD2-201ENST00000308077 NIPA1Q7RTP0 329 aa7.81□□□□□ -1.16
PTCD2-201ENST00000308077 ANKRD23Q86SG2 305 aa7.81□□□□□ -1.16
PTCD2-201ENST00000308077 ZNF577Q9BSK1 485 aa7.81□□□□□ -1.16
PTCD2-201ENST00000308077 CUEDC2Q9H467 287 aa7.81□□□□□ -1.16
PTCD2-201ENST00000308077 JADE2Q9NQC1 790 aa7.81□□□□□ -1.16
PTCD2-201ENST00000308077 KCNH7Q9NS40 1196 aa7.81□□□□□ -1.16
PTCD2-201ENST00000308077 FBXO40Q9UH90 709 aa7.81□□□□□ -1.16
PTCD2-201ENST00000308077 SLC45A1Q9Y2W3 748 aa7.81□□□□□ -1.16
PTCD2-201ENST00000308077 DOCK5Q9H7D0 1870 aa7.81□□□□□ -1.16
PTCD2-201ENST00000308077 PLXNB2O15031 1838 aa7.81□□□□□ -1.16
PTCD2-201ENST00000308077 DHX15O43143 795 aaKnown RBP7.81□□□□□ -1.16
PTCD2-201ENST00000308077 NR3C2P08235 984 aa7.81□□□□□ -1.16
PTCD2-201ENST00000308077 SPATA31C1P0DKV0 1188 aa7.81□□□□□ -1.16
PTCD2-201ENST00000308077 CCND2P30279 289 aa7.81□□□□□ -1.16
PTCD2-201ENST00000308077 CCT6AP40227 531 aaKnown RBP7.81□□□□□ -1.16
PTCD2-201ENST00000308077 ERVK-9P63128 1117 aa7.81□□□□□ -1.16
PTCD2-201ENST00000308077 ERVK-24P63145 666 aa7.81□□□□□ -1.16
PTCD2-201ENST00000308077 SEMA3FQ13275 785 aa7.81□□□□□ -1.16
PTCD2-201ENST00000308077 ITGB3BPQ13352 177 aaPredicted RBP7.81□□□□□ -1.16
PTCD2-201ENST00000308077 PPP2R5CQ13362 524 aa7.81□□□□□ -1.16
PTCD2-201ENST00000308077 MCM6Q14566 821 aa7.81□□□□□ -1.16
PTCD2-201ENST00000308077 DHX30Q7L2E3 1194 aaKnown RBP eCLIP7.81□□□□□ -1.16
PTCD2-201ENST00000308077 SAPCD2Q86UD0 394 aa7.81□□□□□ -1.16
PTCD2-201ENST00000308077 VSIG10LQ86VR7 867 aa7.81□□□□□ -1.16
PTCD2-201ENST00000308077 DHX40Q8IX18 779 aaKnown RBP7.81□□□□□ -1.16
PTCD2-201ENST00000308077 ANKRD35Q8N283 1001 aa7.81□□□□□ -1.16
PTCD2-201ENST00000308077 NSUN6Q8TEA1 469 aaKnown RBP7.81□□□□□ -1.16
PTCD2-201ENST00000308077 RAD54LQ92698 747 aa7.81□□□□□ -1.16
PTCD2-201ENST00000308077 UNC45AQ9H3U1 944 aa7.81□□□□□ -1.16
PTCD2-201ENST00000308077 MAGEF1Q9HAY2 307 aa7.81□□□□□ -1.16
PTCD2-201ENST00000308077 AGO4Q9HCK5 861 aaKnown RBP7.81□□□□□ -1.16
PTCD2-201ENST00000308077 PKD2L1Q9P0L9 805 aa7.81□□□□□ -1.16
PTCD2-201ENST00000308077 STK17AQ9UEE5 414 aa7.81□□□□□ -1.16
PTCD2-201ENST00000308077 PNMA3Q9UL41 463 aa7.81□□□□□ -1.16
PTCD2-201ENST00000308077 PFASO15067 1338 aa7.81□□□□□ -1.16
PTCD2-201ENST00000308077 IPO5O00410 1097 aaKnown RBP7.8□□□□□ -1.16
PTCD2-201ENST00000308077 AP5Z1O43299 807 aa7.8□□□□□ -1.16
PTCD2-201ENST00000308077 KLRC4O43908 158 aa7.8□□□□□ -1.16
PTCD2-201ENST00000308077 GAS7O60861 476 aa7.8□□□□□ -1.16
PTCD2-201ENST00000308077 SMC2O95347 1197 aa7.8□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms