RNA–Protein interactions for RNA: ENST00000302303.5

RFX3-201, Transcript of regulatory factor X3, humanhuman

TSL 1 (best) BASIC

Gene RFX3, Length 1,522 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX3-201ENST00000302303 IGSF22Q8N9C0 903 aa10.74□□□□□ -0.69
RFX3-201ENST00000302303 TMEM87AQ8NBN3 555 aa10.74□□□□□ -0.69
RFX3-201ENST00000302303 RAET1EQ8TD07 263 aa10.74□□□□□ -0.69
RFX3-201ENST00000302303 RIT2Q99578 217 aa10.74□□□□□ -0.69
RFX3-201ENST00000302303 ZNF577Q9BSK1 485 aa10.74□□□□□ -0.69
RFX3-201ENST00000302303 MMTAG2Q9BU76 263 aaKnown RBP10.74□□□□□ -0.69
RFX3-201ENST00000302303 NRBP1Q9UHY1 535 aa10.74□□□□□ -0.69
RFX3-201ENST00000302303 CFAP45Q9UL16 551 aa10.74□□□□□ -0.69
RFX3-201ENST00000302303 PCDHA7Q9UN72 937 aa10.74□□□□□ -0.69
RFX3-201ENST00000302303 NFASCO94856 1347 aa10.73□□□□□ -0.69
RFX3-201ENST00000302303 LAD1O00515 517 aa10.73□□□□□ -0.69
RFX3-201ENST00000302303 FARP2O94887 1054 aaPredicted RBP10.73□□□□□ -0.69
RFX3-201ENST00000302303 ATG7O95352 703 aa10.73□□□□□ -0.69
RFX3-201ENST00000302303 HMGCRP04035 888 aa10.73□□□□□ -0.69
RFX3-201ENST00000302303 GRK4P32298 578 aa10.73□□□□□ -0.69
RFX3-201ENST00000302303 TXKP42681 527 aa10.73□□□□□ -0.69
RFX3-201ENST00000302303 FXR2P51116 673 aaKnown RBP eCLIP10.73□□□□□ -0.69
RFX3-201ENST00000302303 ARHGAP1Q07960 439 aa10.73□□□□□ -0.69
RFX3-201ENST00000302303 GNPTABQ3T906 1256 aa10.73□□□□□ -0.69
RFX3-201ENST00000302303 DUSP28Q4G0W2 176 aa10.73□□□□□ -0.69
RFX3-201ENST00000302303 CELF3Q5SZQ8 465 aaKnown RBP10.73□□□□□ -0.69
RFX3-201ENST00000302303 IQSEC1Q6DN90 963 aa10.73□□□□□ -0.69
RFX3-201ENST00000302303 CTU1Q7Z7A3 348 aaKnown RBP10.73□□□□□ -0.69
RFX3-201ENST00000302303 SLAIN1Q8ND83 568 aa10.73□□□□□ -0.69
RFX3-201ENST00000302303 SH3TC2Q8TF17 1288 aa10.73□□□□□ -0.69
RFX3-201ENST00000302303 SCFD2Q8WU76 684 aa10.73□□□□□ -0.69
RFX3-201ENST00000302303 LENG1Q96BZ8 264 aaPredicted RBP10.73□□□□□ -0.69
RFX3-201ENST00000302303 UNC45AQ9H3U1 944 aa10.73□□□□□ -0.69
RFX3-201ENST00000302303 TTC12Q9H892 705 aaPredicted RBP10.73□□□□□ -0.69
RFX3-201ENST00000302303 PKD2L1Q9P0L9 805 aa10.73□□□□□ -0.69
RFX3-201ENST00000302303 PCDHA12Q9UN75 941 aa10.73□□□□□ -0.69
RFX3-201ENST00000302303 GSTTP1A0A1W2PQM5 241 aa10.72□□□□□ -0.69
RFX3-201ENST00000302303 PP2D1A8MPX8 630 aa10.72□□□□□ -0.69
RFX3-201ENST00000302303 GADD45BO75293 160 aaPredicted RBP10.72□□□□□ -0.69
RFX3-201ENST00000302303 BMP15O95972 392 aa10.72□□□□□ -0.69
RFX3-201ENST00000302303 INHAP05111 366 aa10.72□□□□□ -0.69
RFX3-201ENST00000302303 TXNP10599 105 aaKnown RBP10.72□□□□□ -0.69
RFX3-201ENST00000302303 PRKAR2AP13861 404 aaKnown RBP10.72□□□□□ -0.69
RFX3-201ENST00000302303 CDC25AP30304 524 aa10.72□□□□□ -0.69
RFX3-201ENST00000302303 TECP42680 631 aa10.72□□□□□ -0.69
RFX3-201ENST00000302303 NKX3-2P78367 333 aa10.72□□□□□ -0.69
RFX3-201ENST00000302303 PPP2R5CQ13362 524 aa10.72□□□□□ -0.69
RFX3-201ENST00000302303 HSDL1Q3SXM5 330 aa10.72□□□□□ -0.69
RFX3-201ENST00000302303 SPECC1Q5M775 1068 aa10.72□□□□□ -0.69
RFX3-201ENST00000302303 MFSD14CQ5VZR4 134 aa10.72□□□□□ -0.69
RFX3-201ENST00000302303 LHX8Q68G74 356 aa10.72□□□□□ -0.69
RFX3-201ENST00000302303 KCNV1Q6PIU1 500 aa10.72□□□□□ -0.69
RFX3-201ENST00000302303 SHC4Q6S5L8 630 aa10.72□□□□□ -0.69
RFX3-201ENST00000302303 CYFIP1Q7L576 1253 aa10.72□□□□□ -0.69
RFX3-201ENST00000302303 LRRC15Q8TF66 581 aa10.72□□□□□ -0.69
RFX3-201ENST00000302303 CDHR1Q96JP9 859 aa10.72□□□□□ -0.69
RFX3-201ENST00000302303 SPATA32Q96LK8 384 aa10.72□□□□□ -0.69
RFX3-201ENST00000302303 MPHOSPH6Q99547 160 aaKnown RBP10.72□□□□□ -0.69
RFX3-201ENST00000302303 SCAND2PQ9GZW5 306 aaPredicted RBP10.72□□□□□ -0.69
RFX3-201ENST00000302303 CSRNP2Q9H175 543 aa10.72□□□□□ -0.69
RFX3-201ENST00000302303 PRDM10Q9NQV6 1147 aa10.72□□□□□ -0.69
RFX3-201ENST00000302303 ZHX1Q9UKY1 873 aaPredicted RBP10.72□□□□□ -0.69
RFX3-201ENST00000302303 DOCK5Q9H7D0 1870 aa10.72□□□□□ -0.69
RFX3-201ENST00000302303 ELP1O95163 1332 aa10.72□□□□□ -0.69
RFX3-201ENST00000302303 VWA3AA6NCI4 1184 aa10.71□□□□□ -0.69
RFX3-201ENST00000302303 POTEMA6NI47 508 aa10.71□□□□□ -0.69
RFX3-201ENST00000302303 SEPT4O43236 478 aa10.71□□□□□ -0.69
RFX3-201ENST00000302303 SORBS3O60504 671 aa10.71□□□□□ -0.69
RFX3-201ENST00000302303 GGPS1O95749 300 aa10.71□□□□□ -0.69
RFX3-201ENST00000302303 NCLP19338 710 aaKnown RBP10.71□□□□□ -0.69
RFX3-201ENST00000302303 TNFAIP2Q03169 654 aa10.71□□□□□ -0.69
RFX3-201ENST00000302303 PDIA5Q14554 519 aa10.71□□□□□ -0.69
RFX3-201ENST00000302303 TTLL4Q14679 1199 aa10.71□□□□□ -0.69
RFX3-201ENST00000302303 STK38Q15208 465 aa10.71□□□□□ -0.69
RFX3-201ENST00000302303 MTFR1Q15390 333 aa10.71□□□□□ -0.69
RFX3-201ENST00000302303 ECM1Q16610 540 aa10.71□□□□□ -0.69
RFX3-201ENST00000302303 LRCH2Q5VUJ6 765 aa10.71□□□□□ -0.69
RFX3-201ENST00000302303 ABHD15Q6UXT9 468 aa10.71□□□□□ -0.69
RFX3-201ENST00000302303 DTHD1Q6ZMT9 781 aa10.71□□□□□ -0.69
RFX3-201ENST00000302303 SLFN12Q8IYM2 578 aa10.71□□□□□ -0.69
RFX3-201ENST00000302303 KCNG4Q8TDN1 519 aa10.71□□□□□ -0.69
RFX3-201ENST00000302303 EMID1Q96A84 441 aaPredicted RBP10.71□□□□□ -0.69
RFX3-201ENST00000302303 EPSTI1Q96J88 318 aa10.71□□□□□ -0.69
RFX3-201ENST00000302303 PCYT2Q99447 389 aa10.71□□□□□ -0.69
RFX3-201ENST00000302303 TBC1D22BQ9NU19 505 aa10.71□□□□□ -0.69
RFX3-201ENST00000302303 LMBRD1Q9NUN5 540 aa10.71□□□□□ -0.69
RFX3-201ENST00000302303 WRAP73Q9P2S5 460 aaPredicted RBP10.71□□□□□ -0.69
RFX3-201ENST00000302303 CEP131Q9UPN4 1083 aa10.71□□□□□ -0.69
RFX3-201ENST00000302303 A0A087X0B3 334 aa10.7□□□□□ -0.7
RFX3-201ENST00000302303 IGKV6D-21A0A0A0MT36 114 aa10.7□□□□□ -0.7
RFX3-201ENST00000302303 FAM237AA0A1B0GTK4 181 aa10.7□□□□□ -0.7
RFX3-201ENST00000302303 DDX39AO00148 427 aaKnown RBP10.7□□□□□ -0.7
RFX3-201ENST00000302303 GAS7O60861 476 aa10.7□□□□□ -0.7
RFX3-201ENST00000302303 SPATA31C1P0DKV0 1188 aa10.7□□□□□ -0.7
RFX3-201ENST00000302303 HOXD8P13378 290 aaPredicted RBP10.7□□□□□ -0.7
RFX3-201ENST00000302303 ADALQ6DHV7 355 aa10.7□□□□□ -0.7
RFX3-201ENST00000302303 FBXO46Q6PJ61 603 aaPredicted RBP10.7□□□□□ -0.7
RFX3-201ENST00000302303 METTL7BQ6UX53 244 aa10.7□□□□□ -0.7
RFX3-201ENST00000302303 KRI1Q8N9T8 703 aaKnown RBP10.7□□□□□ -0.7
RFX3-201ENST00000302303 ZNF579Q8NAF0 562 aaKnown RBP10.7□□□□□ -0.7
RFX3-201ENST00000302303 FERMT2Q96AC1 680 aa10.7□□□□□ -0.7
RFX3-201ENST00000302303 GPR20Q99678 358 aa10.7□□□□□ -0.7
RFX3-201ENST00000302303 HSD17B14Q9BPX1 270 aa10.7□□□□□ -0.7
RFX3-201ENST00000302303 FAM184BQ9ULE4 1060 aa10.7□□□□□ -0.7
RFX3-201ENST00000302303 DNAH12Q6ZR08 3092 aa10.69□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms