RNA–Protein interactions for RNA: ENST00000302206.9

TPM3-202, Transcript of tropomyosin 3, humanhuman

TSL 3 BASIC

Gene TPM3, Length 741 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-202ENST00000302206 SMYD4Q8IYR2 804 aaPredicted RBP13.41□□□□□ -0.26
TPM3-202ENST00000302206 CCDC150Q8NCX0 1101 aa13.41□□□□□ -0.26
TPM3-202ENST00000302206 MXRA8Q9BRK3 442 aa13.41□□□□□ -0.26
TPM3-202ENST00000302206 WDR11Q9BZH6 1224 aa13.41□□□□□ -0.26
TPM3-202ENST00000302206 ZNF408Q9H9D4 720 aa13.41□□□□□ -0.26
TPM3-202ENST00000302206 RAVER2Q9HCJ3 691 aaKnown RBP13.41□□□□□ -0.26
TPM3-202ENST00000302206 BMP2KQ9NSY1 1161 aaPredicted RBP13.41□□□□□ -0.26
TPM3-202ENST00000302206 NRBP1Q9UHY1 535 aa13.41□□□□□ -0.26
TPM3-202ENST00000302206 GDAQ9Y2T3 454 aa13.41□□□□□ -0.26
TPM3-202ENST00000302206 SNCAIPQ9Y6H5 919 aa13.41□□□□□ -0.26
TPM3-202ENST00000302206 A0A1B0GTH6 734 aa13.4□□□□□ -0.26
TPM3-202ENST00000302206 BICDL2A1A5D9 508 aa13.4□□□□□ -0.26
TPM3-202ENST00000302206 LRRC10BA6NIK2 292 aa13.4□□□□□ -0.26
TPM3-202ENST00000302206 NFIBO00712 420 aa13.4□□□□□ -0.26
TPM3-202ENST00000302206 ALAS1P13196 640 aa13.4□□□□□ -0.26
TPM3-202ENST00000302206 IREB2P48200 963 aaKnown RBP13.4□□□□□ -0.26
TPM3-202ENST00000302206 HMGCS2P54868 508 aa13.4□□□□□ -0.26
TPM3-202ENST00000302206 EHHADHQ08426 723 aa13.4□□□□□ -0.26
TPM3-202ENST00000302206 ECM1Q16610 540 aa13.4□□□□□ -0.26
TPM3-202ENST00000302206 TPD52L1Q16890 204 aaPredicted RBP13.4□□□□□ -0.26
TPM3-202ENST00000302206 PCNX4Q63HM2 1172 aa13.4□□□□□ -0.26
TPM3-202ENST00000302206 PPP1R3FQ6ZSY5 799 aaPredicted RBP13.4□□□□□ -0.26
TPM3-202ENST00000302206 APTXQ7Z2E3 356 aaKnown RBP13.4□□□□□ -0.26
TPM3-202ENST00000302206 KCNK18Q7Z418 384 aa13.4□□□□□ -0.26
TPM3-202ENST00000302206 LRRC8AQ8IWT6 810 aa13.4□□□□□ -0.26
TPM3-202ENST00000302206 SYTL5Q8TDW5 730 aaPredicted RBP13.4□□□□□ -0.26
TPM3-202ENST00000302206 SPOCK2Q92563 424 aa13.4□□□□□ -0.26
TPM3-202ENST00000302206 ATG4CQ96DT6 458 aa13.4□□□□□ -0.26
TPM3-202ENST00000302206 RIT2Q99578 217 aa13.4□□□□□ -0.26
TPM3-202ENST00000302206 TUFT1Q9NNX1 390 aa13.4□□□□□ -0.26
TPM3-202ENST00000302206 SAMSN1Q9NSI8 373 aaKnown RBP13.4□□□□□ -0.26
TPM3-202ENST00000302206 HOXC10Q9NYD6 342 aa13.4□□□□□ -0.26
TPM3-202ENST00000302206 LIMA1Q9UHB6 759 aaKnown RBP13.4□□□□□ -0.26
TPM3-202ENST00000302206 CSADQ9Y600 493 aa13.4□□□□□ -0.26
TPM3-202ENST00000302206 POLR2AP24928 1970 aaKnown RBP13.4□□□□□ -0.27
TPM3-202ENST00000302206 MED24O75448 989 aa13.39□□□□□ -0.27
TPM3-202ENST00000302206 PLA2G4BP0C869 781 aa13.39□□□□□ -0.27
TPM3-202ENST00000302206 SPATA31C1P0DKV0 1188 aa13.39□□□□□ -0.27
TPM3-202ENST00000302206 CCNE1P24864 410 aa13.39□□□□□ -0.27
TPM3-202ENST00000302206 STAT3P40763 770 aa13.39□□□□□ -0.27
TPM3-202ENST00000302206 STX17P56962 302 aa13.39□□□□□ -0.27
TPM3-202ENST00000302206 VGLL4Q14135 290 aa13.39□□□□□ -0.27
TPM3-202ENST00000302206 NR1I3Q14994 352 aa13.39□□□□□ -0.27
TPM3-202ENST00000302206 LRCH2Q5VUJ6 765 aa13.39□□□□□ -0.27
TPM3-202ENST00000302206 NCAPH2Q6IBW4 605 aa13.39□□□□□ -0.27
TPM3-202ENST00000302206 DLK2Q6UY11 383 aa13.39□□□□□ -0.27
TPM3-202ENST00000302206 OTOP1Q7RTM1 612 aa13.39□□□□□ -0.27
TPM3-202ENST00000302206 TMC6Q7Z403 805 aa13.39□□□□□ -0.27
TPM3-202ENST00000302206 CPXCR1Q8N123 301 aa13.39□□□□□ -0.27
TPM3-202ENST00000302206 ANKRD20A12PQ8NF67 263 aa13.39□□□□□ -0.27
TPM3-202ENST00000302206 CYP2W1Q8TAV3 490 aa13.39□□□□□ -0.27
TPM3-202ENST00000302206 KIAA1524Q8TCG1 905 aa13.39□□□□□ -0.27
TPM3-202ENST00000302206 NEK9Q8TD19 979 aa13.39□□□□□ -0.27
TPM3-202ENST00000302206 CACTINQ8WUQ7 758 aaKnown RBP13.39□□□□□ -0.27
TPM3-202ENST00000302206 DDX12PQ92771 950 aa13.39□□□□□ -0.27
TPM3-202ENST00000302206 GJA10Q969M2 543 aa13.39□□□□□ -0.27
TPM3-202ENST00000302206 DNAJC19Q96DA6 116 aa13.39□□□□□ -0.27
TPM3-202ENST00000302206 ZNF830Q96NB3 372 aaPredicted RBP13.39□□□□□ -0.27
TPM3-202ENST00000302206 NAP1L5Q96NT1 182 aaPredicted RBP13.39□□□□□ -0.27
TPM3-202ENST00000302206 TRERF1Q96PN7 1200 aa13.39□□□□□ -0.27
TPM3-202ENST00000302206 THAP9Q9H5L6 903 aa13.39□□□□□ -0.27
TPM3-202ENST00000302206 SPTLC3Q9NUV7 552 aa13.39□□□□□ -0.27
TPM3-202ENST00000302206 COL20A1Q9P218 1284 aa13.39□□□□□ -0.27
TPM3-202ENST00000302206 KIAA1024Q9UPX6 916 aa13.39□□□□□ -0.27
TPM3-202ENST00000302206 DNM3Q9UQ16 869 aa13.39□□□□□ -0.27
TPM3-202ENST00000302206 UBIAD1Q9Y5Z9 338 aa13.39□□□□□ -0.27
TPM3-202ENST00000302206 OTOFQ9HC10 1997 aa13.38□□□□□ -0.27
TPM3-202ENST00000302206 POTEB3A0JP26 581 aa13.38□□□□□ -0.27
TPM3-202ENST00000302206 ADM5C9JUS6 153 aa13.38□□□□□ -0.27
TPM3-202ENST00000302206 GAS7O60861 476 aa13.38□□□□□ -0.27
TPM3-202ENST00000302206 ECM2O94769 699 aaPredicted RBP13.38□□□□□ -0.27
TPM3-202ENST00000302206 NF2P35240 595 aa13.38□□□□□ -0.27
TPM3-202ENST00000302206 SLC12A3P55017 1021 aa13.38□□□□□ -0.27
TPM3-202ENST00000302206 PPATQ06203 517 aa13.38□□□□□ -0.27
TPM3-202ENST00000302206 FILIP1LQ4L180 1135 aa13.38□□□□□ -0.27
TPM3-202ENST00000302206 MUM1L1Q5H9M0 696 aa13.38□□□□□ -0.27
TPM3-202ENST00000302206 TTI2Q6NXR4 508 aa13.38□□□□□ -0.27
TPM3-202ENST00000302206 POTEBQ6S5H4 581 aa13.38□□□□□ -0.27
TPM3-202ENST00000302206 B3GNT9Q6UX72 402 aa13.38□□□□□ -0.27
TPM3-202ENST00000302206 FILIP1Q7Z7B0 1213 aa13.38□□□□□ -0.27
TPM3-202ENST00000302206 CATSPER3Q86XQ3 398 aa13.38□□□□□ -0.27
TPM3-202ENST00000302206 CCDC65Q8IXS2 484 aa13.38□□□□□ -0.27
TPM3-202ENST00000302206 GUF1Q8N442 669 aaKnown RBP13.38□□□□□ -0.27
TPM3-202ENST00000302206 SYT2Q8N9I0 419 aaPredicted RBP13.38□□□□□ -0.27
TPM3-202ENST00000302206 P2RX5Q93086 422 aa13.38□□□□□ -0.27
TPM3-202ENST00000302206 ZIC5Q96T25 663 aa13.38□□□□□ -0.27
TPM3-202ENST00000302206 EIF2AK1Q9BQI3 630 aaKnown RBP13.38□□□□□ -0.27
TPM3-202ENST00000302206 TEKT3Q9BXF9 490 aa13.38□□□□□ -0.27
TPM3-202ENST00000302206 JADE2Q9NQC1 790 aa13.38□□□□□ -0.27
TPM3-202ENST00000302206 RNF146Q9NTX7 359 aa13.38□□□□□ -0.27
TPM3-202ENST00000302206 INTS13Q9NVM9 706 aa13.38□□□□□ -0.27
TPM3-202ENST00000302206 LOC285556D6RIA3 1793 aa13.37□□□□□ -0.27
TPM3-202ENST00000302206 FRMD3A2A2Y4 597 aa13.37□□□□□ -0.27
TPM3-202ENST00000302206 CXCL11O14625 94 aa13.37□□□□□ -0.27
TPM3-202ENST00000302206 CYP11B2P19099 503 aa13.37□□□□□ -0.27
TPM3-202ENST00000302206 EEF1GP26641 437 aaKnown RBP13.37□□□□□ -0.27
TPM3-202ENST00000302206 KCNJ6P48051 423 aa13.37□□□□□ -0.27
TPM3-202ENST00000302206 RPS6P62753 249 aaKnown RBP13.37□□□□□ -0.27
TPM3-202ENST00000302206 STK4Q13043 487 aa13.37□□□□□ -0.27
TPM3-202ENST00000302206 TBX2Q13207 712 aaPredicted RBP13.37□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms