RNA–Protein interactions for RNA: ENST00000302085.8

SMAD1-201, Transcript of SMAD family member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMAD1, Length 1,966 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD1-201ENST00000302085 RGL1Q9NZL6 768 aa24.87■■□□□ 1.57
SMAD1-201ENST00000302085 ZNF214Q9UL59 606 aaPredicted RBP24.87■■□□□ 1.57
SMAD1-201ENST00000302085 FRMPD4Q14CM0 1322 aa24.87■■□□□ 1.57
SMAD1-201ENST00000302085 NPHP3-ACAD11A0A0J9YXS1 232 aa24.86■■□□□ 1.57
SMAD1-201ENST00000302085 GAS7O60861 476 aa24.86■■□□□ 1.57
SMAD1-201ENST00000302085 PPP1R2P41236 205 aa24.86■■□□□ 1.57
SMAD1-201ENST00000302085 CYP4A11Q02928 519 aa24.86■■□□□ 1.57
SMAD1-201ENST00000302085 PSMD2Q13200 908 aa24.86■■□□□ 1.57
SMAD1-201ENST00000302085 TBX2Q13207 712 aaPredicted RBP24.86■■□□□ 1.57
SMAD1-201ENST00000302085 PCNX4Q63HM2 1172 aa24.86■■□□□ 1.57
SMAD1-201ENST00000302085 ANKRD40Q6AI12 368 aa24.86■■□□□ 1.57
SMAD1-201ENST00000302085 SNRNP48Q6IEG0 339 aaKnown RBP24.86■■□□□ 1.57
SMAD1-201ENST00000302085 DNM3Q9UQ16 869 aa24.86■■□□□ 1.57
SMAD1-201ENST00000302085 UBIAD1Q9Y5Z9 338 aa24.86■■□□□ 1.57
SMAD1-201ENST00000302085 CSADQ9Y600 493 aa24.86■■□□□ 1.57
SMAD1-201ENST00000302085 KCNJ18B7U540 433 aa24.85■■□□□ 1.57
SMAD1-201ENST00000302085 BCRP11274 1271 aa24.85■■□□□ 1.57
SMAD1-201ENST00000302085 SKILP12757 684 aa24.85■■□□□ 1.57
SMAD1-201ENST00000302085 MRPS9P82933 396 aaKnown RBP24.85■■□□□ 1.57
SMAD1-201ENST00000302085 KCNJ12Q14500 433 aa24.85■■□□□ 1.57
SMAD1-201ENST00000302085 TCP11X2Q5H9J9 407 aa24.85■■□□□ 1.57
SMAD1-201ENST00000302085 NSMFQ6X4W1 530 aa24.85■■□□□ 1.57
SMAD1-201ENST00000302085 CDCA5Q96FF9 252 aa24.85■■□□□ 1.57
SMAD1-201ENST00000302085 SRRTQ9BXP5 876 aaKnown RBP24.85■■□□□ 1.57
SMAD1-201ENST00000302085 PANK4Q9NVE7 773 aa24.85■■□□□ 1.57
SMAD1-201ENST00000302085 HOXC10Q9NYD6 342 aa24.85■■□□□ 1.57
SMAD1-201ENST00000302085 PAPPA2Q9BXP8 1791 aa24.85■■□□□ 1.57
SMAD1-201ENST00000302085 ATP2A1O14983 1001 aa24.85■■□□□ 1.57
SMAD1-201ENST00000302085 SPAG1Q07617 926 aa24.85■■□□□ 1.57
SMAD1-201ENST00000302085 COASYQ13057 564 aa24.85■■□□□ 1.57
SMAD1-201ENST00000302085 B3GNT9Q6UX72 402 aa24.85■■□□□ 1.57
SMAD1-201ENST00000302085 NIPA1Q7RTP0 329 aa24.85■■□□□ 1.57
SMAD1-201ENST00000302085 ZC3H15Q8WU90 426 aaKnown RBP24.85■■□□□ 1.57
SMAD1-201ENST00000302085 PURBQ96QR8 312 aaKnown RBP24.85■■□□□ 1.57
SMAD1-201ENST00000302085 WDR11Q9BZH6 1224 aa24.85■■□□□ 1.57
SMAD1-201ENST00000302085 SEMA6BQ9H3T3 888 aa24.85■■□□□ 1.57
SMAD1-201ENST00000302085 COL11A1P12107 1806 aaPredicted RBP24.85■■□□□ 1.57
SMAD1-201ENST00000302085 SPDYE16A6NNV3 312 aaPredicted RBP24.84■■□□□ 1.57
SMAD1-201ENST00000302085 IPO5O00410 1097 aaKnown RBP24.84■■□□□ 1.57
SMAD1-201ENST00000302085 CHMP2AO43633 222 aa24.84■■□□□ 1.57
SMAD1-201ENST00000302085 OFD1O75665 1012 aa24.84■■□□□ 1.57
SMAD1-201ENST00000302085 SLITRK3O94933 977 aa24.84■■□□□ 1.57
SMAD1-201ENST00000302085 EIF2AK2P19525 551 aaKnown RBP24.84■■□□□ 1.57
SMAD1-201ENST00000302085 IREB2P48200 963 aaKnown RBP24.84■■□□□ 1.57
SMAD1-201ENST00000302085 PABPC4Q13310 644 aaKnown RBP eCLIP24.84■■□□□ 1.57
SMAD1-201ENST00000302085 BAATQ14032 418 aaPredicted RBP24.84■■□□□ 1.57
SMAD1-201ENST00000302085 TKFCQ3LXA3 575 aa24.84■■□□□ 1.57
SMAD1-201ENST00000302085 SPECC1LQ69YQ0 1117 aa24.84■■□□□ 1.57
SMAD1-201ENST00000302085 SYT2Q8N9I0 419 aaPredicted RBP24.84■■□□□ 1.57
SMAD1-201ENST00000302085 TRIM47Q96LD4 638 aa24.84■■□□□ 1.57
SMAD1-201ENST00000302085 UNC45AQ9H3U1 944 aa24.84■■□□□ 1.57
SMAD1-201ENST00000302085 THAP9Q9H5L6 903 aa24.84■■□□□ 1.57
SMAD1-201ENST00000302085 WDR90Q96KV7 1748 aa24.84■■□□□ 1.57
SMAD1-201ENST00000302085 BICDL2A1A5D9 508 aa24.84■■□□□ 1.57
SMAD1-201ENST00000302085 CTTNQ14247 550 aaKnown RBP24.84■■□□□ 1.57
SMAD1-201ENST00000302085 PGM5Q15124 567 aa24.84■■□□□ 1.57
SMAD1-201ENST00000302085 GPR162Q16538 588 aa24.84■■□□□ 1.57
SMAD1-201ENST00000302085 DYDC2Q96IM9 177 aa24.84■■□□□ 1.57
SMAD1-201ENST00000302085 RIT2Q99578 217 aa24.84■■□□□ 1.57
SMAD1-201ENST00000302085 TUFT1Q9NNX1 390 aa24.84■■□□□ 1.57
SMAD1-201ENST00000302085 KCNH7Q9NS40 1196 aa24.84■■□□□ 1.57
SMAD1-201ENST00000302085 GLTPD2A6NH11 291 aa24.83■■□□□ 1.57
SMAD1-201ENST00000302085 SFPQP23246 707 aaKnown RBP eCLIP24.83■■□□□ 1.57
SMAD1-201ENST00000302085 PBX1P40424 430 aa24.83■■□□□ 1.57
SMAD1-201ENST00000302085 TREML2Q5T2D2 321 aa24.83■■□□□ 1.57
SMAD1-201ENST00000302085 CENPPQ6IPU0 288 aa24.83■■□□□ 1.57
SMAD1-201ENST00000302085 MOB2Q70IA6 237 aa24.83■■□□□ 1.57
SMAD1-201ENST00000302085 GLIS3Q8NEA6 775 aa24.83■■□□□ 1.57
SMAD1-201ENST00000302085 RMDN3Q96TC7 470 aa24.83■■□□□ 1.57
SMAD1-201ENST00000302085 TEKT3Q9BXF9 490 aa24.83■■□□□ 1.57
SMAD1-201ENST00000302085 JADE2Q9NQC1 790 aa24.83■■□□□ 1.57
SMAD1-201ENST00000302085 MYPNQ86TC9 1320 aa24.82■■□□□ 1.56
SMAD1-201ENST00000302085 RBBP6Q7Z6E9 1792 aaKnown RBP24.82■■□□□ 1.56
SMAD1-201ENST00000302085 OTOFQ9HC10 1997 aa24.82■■□□□ 1.56
SMAD1-201ENST00000302085 HOXA7P31268 230 aaPredicted RBP24.82■■□□□ 1.56
SMAD1-201ENST00000302085 COPB1P53618 953 aaKnown RBP24.82■■□□□ 1.56
SMAD1-201ENST00000302085 CACNB1Q02641 598 aaPredicted RBP24.82■■□□□ 1.56
SMAD1-201ENST00000302085 FILIP1LQ4L180 1135 aa24.82■■□□□ 1.56
SMAD1-201ENST00000302085 GUF1Q8N442 669 aaKnown RBP24.82■■□□□ 1.56
SMAD1-201ENST00000302085 NOC3LQ8WTT2 800 aaKnown RBP24.82■■□□□ 1.56
SMAD1-201ENST00000302085 CLMNQ96JQ2 1002 aa24.82■■□□□ 1.56
SMAD1-201ENST00000302085 PDCD2LQ9BRP1 358 aa24.82■■□□□ 1.56
SMAD1-201ENST00000302085 ELP3Q9H9T3 547 aa24.82■■□□□ 1.56
SMAD1-201ENST00000302085 PXMP2Q9NR77 195 aa24.82■■□□□ 1.56
SMAD1-201ENST00000302085 TAB2Q9NYJ8 693 aa24.82■■□□□ 1.56
SMAD1-201ENST00000302085 PCDHA2Q9Y5H9 948 aa24.82■■□□□ 1.56
SMAD1-201ENST00000302085 LRRC41Q15345 812 aa24.82■■□□□ 1.56
SMAD1-201ENST00000302085 CREBRFQ8IUR6 639 aa24.82■■□□□ 1.56
SMAD1-201ENST00000302085 TPH2Q8IWU9 490 aa24.82■■□□□ 1.56
SMAD1-201ENST00000302085 CCDC65Q8IXS2 484 aa24.82■■□□□ 1.56
SMAD1-201ENST00000302085 KCTD17Q8N5Z5 321 aa24.82■■□□□ 1.56
SMAD1-201ENST00000302085 CSGALNACT2Q8N6G5 542 aa24.82■■□□□ 1.56
SMAD1-201ENST00000302085 DHX15O43143 795 aaKnown RBP24.81■■□□□ 1.56
SMAD1-201ENST00000302085 EYA4O95677 639 aa24.81■■□□□ 1.56
SMAD1-201ENST00000302085 GOLGA8FQ08AF8 430 aa24.81■■□□□ 1.56
SMAD1-201ENST00000302085 RAD51AP2Q09MP3 1159 aa24.81■■□□□ 1.56
SMAD1-201ENST00000302085 GOLGA8DPQ0D2H9 430 aa24.81■■□□□ 1.56
SMAD1-201ENST00000302085 GIT2Q14161 759 aa24.81■■□□□ 1.56
SMAD1-201ENST00000302085 EPHA7Q15375 998 aa24.81■■□□□ 1.56
SMAD1-201ENST00000302085 TEX13BQ9BXU2 312 aa24.81■■□□□ 1.56
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms