RNA–Protein interactions for RNA: ENST00000297933.10

GAPVD1-202, Transcript of GTPase activating protein and VPS9 domains 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene GAPVD1, Length 6,003 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPVD1-202ENST00000297933 ARHGAP31Q2M1Z3 1444 aa7.52□□□□□ -1.21
GAPVD1-202ENST00000297933 ABCC12Q96J65 1359 aa7.52□□□□□ -1.21
GAPVD1-202ENST00000297933 EIF3CLB5ME19 914 aaKnown RBP7.52□□□□□ -1.21
GAPVD1-202ENST00000297933 KIF28PB7ZC32 967 aa7.52□□□□□ -1.21
GAPVD1-202ENST00000297933 CYP19A1P11511 503 aaPredicted RBP7.52□□□□□ -1.21
GAPVD1-202ENST00000297933 RUFY4Q6ZNE9 571 aa7.52□□□□□ -1.21
GAPVD1-202ENST00000297933 RAB44Q7Z6P3 723 aaPredicted RBP7.52□□□□□ -1.21
GAPVD1-202ENST00000297933 OR8K1Q8NGG5 319 aa7.52□□□□□ -1.21
GAPVD1-202ENST00000297933 HDAC11Q96DB2 347 aa7.52□□□□□ -1.21
GAPVD1-202ENST00000297933 RILPQ96NA2 401 aa7.52□□□□□ -1.21
GAPVD1-202ENST00000297933 EIF3CQ99613 913 aaKnown RBP7.52□□□□□ -1.21
GAPVD1-202ENST00000297933 ZNF302Q9NR11 478 aa7.52□□□□□ -1.21
GAPVD1-202ENST00000297933 PCDHA6Q9UN73 950 aa7.52□□□□□ -1.21
GAPVD1-202ENST00000297933 PCDHA8Q9Y5H6 950 aa7.52□□□□□ -1.21
GAPVD1-202ENST00000297933 RPAP1Q9BWH6 1393 aaPredicted RBP7.52□□□□□ -1.21
GAPVD1-202ENST00000297933 ARHGAP6O43182 974 aa7.52□□□□□ -1.21
GAPVD1-202ENST00000297933 BUB1O43683 1085 aa7.52□□□□□ -1.21
GAPVD1-202ENST00000297933 LDHAP00338 332 aaKnown RBP7.52□□□□□ -1.21
GAPVD1-202ENST00000297933 CAPN2P17655 700 aa7.52□□□□□ -1.21
GAPVD1-202ENST00000297933 GBP1P32455 592 aa7.52□□□□□ -1.21
GAPVD1-202ENST00000297933 DDIT3P35638 169 aa7.52□□□□□ -1.21
GAPVD1-202ENST00000297933 SREBF2Q12772 1141 aa7.52□□□□□ -1.21
GAPVD1-202ENST00000297933 PPFIA1Q13136 1202 aa7.52□□□□□ -1.21
GAPVD1-202ENST00000297933 AP3B2Q13367 1082 aa7.52□□□□□ -1.21
GAPVD1-202ENST00000297933 USP28Q96RU2 1077 aa7.52□□□□□ -1.21
GAPVD1-202ENST00000297933 ZKSCAN5Q9Y2L8 839 aa7.52□□□□□ -1.21
GAPVD1-202ENST00000297933 CLIC4Q9Y696 253 aa7.52□□□□□ -1.21
GAPVD1-202ENST00000297933 MYO1FO00160 1098 aa7.51□□□□□ -1.21
GAPVD1-202ENST00000297933 KRIT1O00522 736 aa7.51□□□□□ -1.21
GAPVD1-202ENST00000297933 RRP9O43818 475 aaKnown RBP7.51□□□□□ -1.21
GAPVD1-202ENST00000297933 CYP2E1P05181 493 aaPredicted RBP7.51□□□□□ -1.21
GAPVD1-202ENST00000297933 SEPT2Q15019 361 aa7.51□□□□□ -1.21
GAPVD1-202ENST00000297933 SCN4BQ8IWT1 228 aa7.51□□□□□ -1.21
GAPVD1-202ENST00000297933 PPFIBP2Q8ND30 876 aa7.51□□□□□ -1.21
GAPVD1-202ENST00000297933 CNOT6LQ96LI5 555 aaKnown RBP7.51□□□□□ -1.21
GAPVD1-202ENST00000297933 SPATA33Q96N06 139 aa7.51□□□□□ -1.21
GAPVD1-202ENST00000297933 PARK7Q99497 189 aaKnown RBP7.51□□□□□ -1.21
GAPVD1-202ENST00000297933 ACAD9Q9H845 621 aa7.51□□□□□ -1.21
GAPVD1-202ENST00000297933 H7C1W4 665 aa7.51□□□□□ -1.21
GAPVD1-202ENST00000297933 PRPF3O43395 683 aaKnown RBP7.51□□□□□ -1.21
GAPVD1-202ENST00000297933 H2AFZP0C0S5 128 aa7.51□□□□□ -1.21
GAPVD1-202ENST00000297933 ATF2P15336 505 aa7.51□□□□□ -1.21
GAPVD1-202ENST00000297933 VPS41P49754 854 aa7.51□□□□□ -1.21
GAPVD1-202ENST00000297933 NT5C2P49902 561 aa7.51□□□□□ -1.21
GAPVD1-202ENST00000297933 PTPN12Q05209 780 aaKnown RBP7.51□□□□□ -1.21
GAPVD1-202ENST00000297933 SNAPC2Q13487 334 aa7.51□□□□□ -1.21
GAPVD1-202ENST00000297933 NFIXQ14938 502 aa7.51□□□□□ -1.21
GAPVD1-202ENST00000297933 LRRC41Q15345 812 aa7.51□□□□□ -1.21
GAPVD1-202ENST00000297933 RCSD1Q6JBY9 416 aa7.51□□□□□ -1.21
GAPVD1-202ENST00000297933 H2AFVQ71UI9 128 aa7.51□□□□□ -1.21
GAPVD1-202ENST00000297933 KIAA1468Q9P260 1216 aa7.51□□□□□ -1.21
GAPVD1-202ENST00000297933 FAM196BA6NMK8 535 aa7.51□□□□□ -1.21
GAPVD1-202ENST00000297933 SH2B2O14492 632 aaPredicted RBP7.51□□□□□ -1.21
GAPVD1-202ENST00000297933 PLA2G4BP0C869 781 aa7.51□□□□□ -1.21
GAPVD1-202ENST00000297933 ACTN1P12814 892 aa7.51□□□□□ -1.21
GAPVD1-202ENST00000297933 IQCB1Q15051 598 aa7.51□□□□□ -1.21
GAPVD1-202ENST00000297933 NKX1-1Q15270 411 aaPredicted RBP7.51□□□□□ -1.21
GAPVD1-202ENST00000297933 THNSL1Q8IYQ7 743 aa7.51□□□□□ -1.21
GAPVD1-202ENST00000297933 TRIM58Q8NG06 486 aa7.51□□□□□ -1.21
GAPVD1-202ENST00000297933 OR6J1Q8NGC5 347 aa7.51□□□□□ -1.21
GAPVD1-202ENST00000297933 CELF1Q92879 486 aaKnown RBP7.51□□□□□ -1.21
GAPVD1-202ENST00000297933 TYW1Q9NV66 732 aaKnown RBP7.51□□□□□ -1.21
GAPVD1-202ENST00000297933 MROH7-TTC4A0A0A0MT08 1334 aa7.51□□□□□ -1.21
GAPVD1-202ENST00000297933 SGK1O00141 431 aa7.51□□□□□ -1.21
GAPVD1-202ENST00000297933 EBAG9O00559 213 aa7.51□□□□□ -1.21
GAPVD1-202ENST00000297933 CLGNO14967 610 aa7.51□□□□□ -1.21
GAPVD1-202ENST00000297933 MAPK4P31152 587 aa7.51□□□□□ -1.21
GAPVD1-202ENST00000297933 NNMTP40261 264 aa7.51□□□□□ -1.21
GAPVD1-202ENST00000297933 PTPROQ16827 1216 aa7.51□□□□□ -1.21
GAPVD1-202ENST00000297933 TMED8Q6PL24 325 aaPredicted RBP7.51□□□□□ -1.21
GAPVD1-202ENST00000297933 RAPH1Q70E73 1250 aa7.51□□□□□ -1.21
GAPVD1-202ENST00000297933 BEST2Q8NFU1 509 aa7.51□□□□□ -1.21
GAPVD1-202ENST00000297933 ATP6V1E2Q96A05 226 aa7.51□□□□□ -1.21
GAPVD1-202ENST00000297933 RPAP3Q9H6T3 665 aaPredicted RBP7.51□□□□□ -1.21
GAPVD1-202ENST00000297933 ABCF3Q9NUQ8 709 aa7.51□□□□□ -1.21
GAPVD1-202ENST00000297933 PREX2Q70Z35 1606 aa7.51□□□□□ -1.21
GAPVD1-202ENST00000297933 GADD45BO75293 160 aaPredicted RBP7.51□□□□□ -1.21
GAPVD1-202ENST00000297933 KRT3P12035 628 aa7.51□□□□□ -1.21
GAPVD1-202ENST00000297933 ADKP55263 362 aaKnown RBP7.51□□□□□ -1.21
GAPVD1-202ENST00000297933 RBBP5Q15291 538 aaKnown RBP7.51□□□□□ -1.21
GAPVD1-202ENST00000297933 DNAJC24Q6P3W2 148 aa7.51□□□□□ -1.21
GAPVD1-202ENST00000297933 BBOF1Q8ND07 529 aa7.51□□□□□ -1.21
GAPVD1-202ENST00000297933 MTRQ99707 1265 aa7.51□□□□□ -1.21
GAPVD1-202ENST00000297933 GCOM2Q9BZD3 368 aaPredicted RBP7.51□□□□□ -1.21
GAPVD1-202ENST00000297933 BZW2Q9Y6E2 419 aaKnown RBP7.51□□□□□ -1.21
GAPVD1-202ENST00000297933 GSPT1P15170 499 aaKnown RBP7.5□□□□□ -1.21
GAPVD1-202ENST00000297933 PEX3P56589 373 aa7.5□□□□□ -1.21
GAPVD1-202ENST00000297933 THOC5Q13769 683 aaKnown RBP7.5□□□□□ -1.21
GAPVD1-202ENST00000297933 MESDQ14696 234 aa7.5□□□□□ -1.21
GAPVD1-202ENST00000297933 PPP2R5EQ16537 467 aa7.5□□□□□ -1.21
GAPVD1-202ENST00000297933 MAPK6Q16659 721 aa7.5□□□□□ -1.21
GAPVD1-202ENST00000297933 CAPN12Q6ZSI9 719 aa7.5□□□□□ -1.21
GAPVD1-202ENST00000297933 MYLK4Q86YV6 388 aaPredicted RBP7.5□□□□□ -1.21
GAPVD1-202ENST00000297933 KCTD6Q8NC69 237 aa7.5□□□□□ -1.21
GAPVD1-202ENST00000297933 ZNF653Q96CK0 615 aa7.5□□□□□ -1.21
GAPVD1-202ENST00000297933 ABCC3O15438 1527 aa7.5□□□□□ -1.21
GAPVD1-202ENST00000297933 ZBTB5O15062 677 aa7.5□□□□□ -1.21
GAPVD1-202ENST00000297933 HUS1O60921 280 aa7.5□□□□□ -1.21
GAPVD1-202ENST00000297933 CELF2O95319 508 aaKnown RBP7.5□□□□□ -1.21
GAPVD1-202ENST00000297933 STAT3P40763 770 aa7.5□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms