RNA–Protein interactions for RNA: ENST00000297661.8

UBAP1-201, Transcript of ubiquitin associated protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBAP1, Length 2,735 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBAP1-201ENST00000297661 CENPHQ9H3R5 247 aa17.18■□□□□ 0.34
UBAP1-201ENST00000297661 ZNHIT6Q9NWK9 470 aaKnown RBP17.18■□□□□ 0.34
UBAP1-201ENST00000297661 LRWD1Q9UFC0 647 aa17.18■□□□□ 0.34
UBAP1-201ENST00000297661 ODF2LQ9ULJ1 636 aa17.18■□□□□ 0.34
UBAP1-201ENST00000297661 SLX4Q8IY92 1834 aa17.18■□□□□ 0.34
UBAP1-201ENST00000297661 LAD1O00515 517 aa17.18■□□□□ 0.34
UBAP1-201ENST00000297661 HSF2BPO75031 334 aa17.18■□□□□ 0.34
UBAP1-201ENST00000297661 LDHCP07864 332 aa17.18■□□□□ 0.34
UBAP1-201ENST00000297661 GNA11P29992 359 aa17.18■□□□□ 0.34
UBAP1-201ENST00000297661 SMTNP53814 917 aa17.18■□□□□ 0.34
UBAP1-201ENST00000297661 GRB10Q13322 594 aa17.18■□□□□ 0.34
UBAP1-201ENST00000297661 UBE2SQ16763 222 aa17.18■□□□□ 0.34
UBAP1-201ENST00000297661 CCDC40Q4G0X9 1142 aa17.18■□□□□ 0.34
UBAP1-201ENST00000297661 NEDD1Q8NHV4 660 aa17.18■□□□□ 0.34
UBAP1-201ENST00000297661 RBM17Q96I25 401 aaKnown RBP17.18■□□□□ 0.34
UBAP1-201ENST00000297661 VCPKMTQ9H867 229 aa17.18■□□□□ 0.34
UBAP1-201ENST00000297661 NPR1P16066 1061 aa17.17■□□□□ 0.34
UBAP1-201ENST00000297661 LSP1P33241 339 aa17.17■□□□□ 0.34
UBAP1-201ENST00000297661 CALCRLQ16602 461 aa17.17■□□□□ 0.34
UBAP1-201ENST00000297661 ALS2CLQ60I27 953 aa17.17■□□□□ 0.34
UBAP1-201ENST00000297661 TMED8Q6PL24 325 aaPredicted RBP17.17■□□□□ 0.34
UBAP1-201ENST00000297661 KCNK18Q7Z418 384 aa17.17■□□□□ 0.34
UBAP1-201ENST00000297661 CCDC47Q96A33 483 aaKnown RBP17.17■□□□□ 0.34
UBAP1-201ENST00000297661 C7orf25Q9BPX7 421 aa17.17■□□□□ 0.34
UBAP1-201ENST00000297661 BLOC1S4Q9NUP1 217 aa17.17■□□□□ 0.34
UBAP1-201ENST00000297661 PIM2Q9P1W9 311 aa17.17■□□□□ 0.34
UBAP1-201ENST00000297661 MAST2Q6P0Q8 1798 aa17.17■□□□□ 0.34
UBAP1-201ENST00000297661 TNNI2P48788 182 aa17.17■□□□□ 0.34
UBAP1-201ENST00000297661 KRT83P78385 493 aa17.17■□□□□ 0.34
UBAP1-201ENST00000297661 SLC7A5Q01650 507 aa17.17■□□□□ 0.34
UBAP1-201ENST00000297661 ACTN3Q08043 901 aaPredicted RBP17.17■□□□□ 0.34
UBAP1-201ENST00000297661 PPP2R5AQ15172 486 aa17.17■□□□□ 0.34
UBAP1-201ENST00000297661 MEA1Q16626 185 aa17.17■□□□□ 0.34
UBAP1-201ENST00000297661 CEP85LQ5SZL2 805 aa17.17■□□□□ 0.34
UBAP1-201ENST00000297661 MMGT1Q8N4V1 131 aa17.17■□□□□ 0.34
UBAP1-201ENST00000297661 CALML4Q96GE6 196 aa17.17■□□□□ 0.34
UBAP1-201ENST00000297661 PNMA5Q96PV4 448 aa17.17■□□□□ 0.34
UBAP1-201ENST00000297661 EPN3Q9H201 632 aa17.17■□□□□ 0.34
UBAP1-201ENST00000297661 MMRN2Q9H8L6 949 aa17.17■□□□□ 0.34
UBAP1-201ENST00000297661 ANO9A1A5B4 782 aa17.16■□□□□ 0.34
UBAP1-201ENST00000297661 KLRG2A4D1S0 409 aaPredicted RBP17.16■□□□□ 0.34
UBAP1-201ENST00000297661 RASSF9O75901 435 aa17.16■□□□□ 0.34
UBAP1-201ENST00000297661 BRD2P25440 801 aaKnown RBP17.16■□□□□ 0.34
UBAP1-201ENST00000297661 EPHB4P54760 987 aa17.16■□□□□ 0.34
UBAP1-201ENST00000297661 RHBDL3P58872 404 aa17.16■□□□□ 0.34
UBAP1-201ENST00000297661 GUCY1A3Q02108 690 aa17.16■□□□□ 0.34
UBAP1-201ENST00000297661 NNTQ13423 1086 aa17.16■□□□□ 0.34
UBAP1-201ENST00000297661 CCDC96Q2M329 555 aa17.16■□□□□ 0.34
UBAP1-201ENST00000297661 CCDC13Q8IYE1 715 aa17.16■□□□□ 0.34
UBAP1-201ENST00000297661 ANKRD13CQ8N6S4 541 aa17.16■□□□□ 0.34
UBAP1-201ENST00000297661 TTLL6Q8N841 843 aa17.16■□□□□ 0.34
UBAP1-201ENST00000297661 RNPC3Q96LT9 517 aaKnown RBP17.16■□□□□ 0.34
UBAP1-201ENST00000297661 AK8Q96MA6 479 aa17.16■□□□□ 0.34
UBAP1-201ENST00000297661 PAGR1Q9BTK6 254 aa17.16■□□□□ 0.34
UBAP1-201ENST00000297661 MLXIPQ9HAP2 919 aa17.16■□□□□ 0.34
UBAP1-201ENST00000297661 BICDL2A1A5D9 508 aa17.16■□□□□ 0.34
UBAP1-201ENST00000297661 RIMBP2O15034 1052 aa17.16■□□□□ 0.34
UBAP1-201ENST00000297661 EDIL3O43854 480 aa17.16■□□□□ 0.34
UBAP1-201ENST00000297661 RAD21O60216 631 aa17.16■□□□□ 0.34
UBAP1-201ENST00000297661 IPO7O95373 1038 aaKnown RBP17.16■□□□□ 0.34
UBAP1-201ENST00000297661 KRT14P02533 472 aa17.16■□□□□ 0.34
UBAP1-201ENST00000297661 CYLC1P35663 651 aaPredicted RBP17.16■□□□□ 0.34
UBAP1-201ENST00000297661 SLC16A2P36021 539 aa17.16■□□□□ 0.34
UBAP1-201ENST00000297661 TGFB2P61812 414 aa17.16■□□□□ 0.34
UBAP1-201ENST00000297661 ZBED6P86452 979 aa17.16■□□□□ 0.34
UBAP1-201ENST00000297661 WLSQ5T9L3 541 aa17.16■□□□□ 0.34
UBAP1-201ENST00000297661 SV2BQ7L1I2 683 aa17.16■□□□□ 0.34
UBAP1-201ENST00000297661 ZNF473Q8WTR7 871 aaKnown RBP17.16■□□□□ 0.34
UBAP1-201ENST00000297661 LZTS2Q9BRK4 669 aa17.16■□□□□ 0.34
UBAP1-201ENST00000297661 MXD3Q9BW11 206 aa17.16■□□□□ 0.34
UBAP1-201ENST00000297661 KANSL2Q9H9L4 492 aa17.16■□□□□ 0.34
UBAP1-201ENST00000297661 SMARCAL1Q9NZC9 954 aa17.16■□□□□ 0.34
UBAP1-201ENST00000297661 TBC1D7Q9P0N9 293 aa17.16■□□□□ 0.34
UBAP1-201ENST00000297661 NAV1Q8NEY1 1877 aa17.16■□□□□ 0.34
UBAP1-201ENST00000297661 GPR75-ASB3A0A0A6YYF3 556 aa17.15■□□□□ 0.34
UBAP1-201ENST00000297661 MYL1P05976 194 aa17.15■□□□□ 0.34
UBAP1-201ENST00000297661 PDHBP11177 359 aa17.15■□□□□ 0.34
UBAP1-201ENST00000297661 YBX3P16989 372 aaKnown RBP eCLIP17.15■□□□□ 0.34
UBAP1-201ENST00000297661 FKBP15Q5T1M5 1219 aa17.15■□□□□ 0.34
UBAP1-201ENST00000297661 CREG2Q8IUH2 290 aa17.15■□□□□ 0.34
UBAP1-201ENST00000297661 CDK5RAP3Q96JB5 506 aa17.15■□□□□ 0.34
UBAP1-201ENST00000297661 ZIM3Q96PE6 472 aa17.15■□□□□ 0.34
UBAP1-201ENST00000297661 MYH1P12882 1939 aa17.15■□□□□ 0.34
UBAP1-201ENST00000297661 C6orf229H3BNL8 230 aa17.15■□□□□ 0.34
UBAP1-201ENST00000297661 AKR1B1P15121 316 aa17.15■□□□□ 0.34
UBAP1-201ENST00000297661 MATR3P43243 847 aaKnown RBP eCLIP17.15■□□□□ 0.345e-9■□□□□ 10.4
UBAP1-201ENST00000297661 IFT88Q13099 833 aa17.15■□□□□ 0.34
UBAP1-201ENST00000297661 ECM1Q16610 540 aa17.15■□□□□ 0.34
UBAP1-201ENST00000297661 TTBK2Q6IQ55 1244 aa17.15■□□□□ 0.34
UBAP1-201ENST00000297661 EMBQ6PCB8 327 aa17.15■□□□□ 0.34
UBAP1-201ENST00000297661 DPP8Q6V1X1 898 aaPredicted RBP17.15■□□□□ 0.34
UBAP1-201ENST00000297661 CCDC42Q96M95 316 aa17.15■□□□□ 0.34
UBAP1-201ENST00000297661 ZNF287Q9HBT7 754 aa17.15■□□□□ 0.34
UBAP1-201ENST00000297661 SLC40A1Q9NP59 571 aa17.15■□□□□ 0.34
UBAP1-201ENST00000297661 POLLQ9UGP5 575 aa17.15■□□□□ 0.34
UBAP1-201ENST00000297661 KCNG1Q9UIX4 513 aa17.15■□□□□ 0.34
UBAP1-201ENST00000297661 DDX60LQ5H9U9 1706 aaKnown RBP17.15■□□□□ 0.34
UBAP1-201ENST00000297661 PPEF1O14829 653 aaPredicted RBP17.14■□□□□ 0.33
UBAP1-201ENST00000297661 SSBP05455 408 aaKnown RBP eCLIP17.14■□□□□ 0.33
UBAP1-201ENST00000297661 GCFC2P16383 781 aaKnown RBP17.14■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms