RNA–Protein interactions for RNA: ENST00000296930.9

NPM1-201, Transcript of nucleophosmin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NPM1, Length 1,758 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPM1-201ENST00000296930 NEDD9Q14511 834 aa18.79■□□□□ 0.6
NPM1-201ENST00000296930 PCNX4Q63HM2 1172 aa18.79■□□□□ 0.6
NPM1-201ENST00000296930 SYNE3Q6ZMZ3 975 aa18.79■□□□□ 0.6
NPM1-201ENST00000296930 CMTR1Q8N1G2 835 aaKnown RBP18.79■□□□□ 0.6
NPM1-201ENST00000296930 DHX38Q92620 1227 aaKnown RBP18.79■□□□□ 0.6
NPM1-201ENST00000296930 NEK1Q96PY6 1258 aa18.79■□□□□ 0.6
NPM1-201ENST00000296930 PRDM12Q9H4Q4 367 aa18.79■□□□□ 0.6
NPM1-201ENST00000296930 DOCK5Q9H7D0 1870 aa18.79■□□□□ 0.6
NPM1-201ENST00000296930 ST18O60284 1047 aa18.78■□□□□ 0.6
NPM1-201ENST00000296930 RABGGTBP53611 331 aa18.78■□□□□ 0.6
NPM1-201ENST00000296930 TMTC3Q6ZXV5 915 aa18.78■□□□□ 0.6
NPM1-201ENST00000296930 RUFY3Q7L099 469 aa18.78■□□□□ 0.6
NPM1-201ENST00000296930 LRRC8DQ7L1W4 858 aa18.78■□□□□ 0.6
NPM1-201ENST00000296930 MICU3Q86XE3 530 aa18.78■□□□□ 0.6
NPM1-201ENST00000296930 PHOSPHO2Q8TCD6 241 aa18.78■□□□□ 0.6
NPM1-201ENST00000296930 SLC9A7Q96T83 725 aa18.78■□□□□ 0.6
NPM1-201ENST00000296930 C16orf70Q9BSU1 422 aa18.78■□□□□ 0.6
NPM1-201ENST00000296930 PSTPIP2Q9H939 334 aa18.78■□□□□ 0.6
NPM1-201ENST00000296930 CHD7Q9P2D1 2997 aa18.78■□□□□ 0.6
NPM1-201ENST00000296930 NOP56O00567 594 aaKnown RBP18.78■□□□□ 0.6
NPM1-201ENST00000296930 BAIAP3O94812 1187 aa18.78■□□□□ 0.6
NPM1-201ENST00000296930 CKBP12277 381 aa18.78■□□□□ 0.6
NPM1-201ENST00000296930 BLOC1S2Q6QNY1 142 aa18.78■□□□□ 0.6
NPM1-201ENST00000296930 METTL7BQ6UX53 244 aa18.78■□□□□ 0.6
NPM1-201ENST00000296930 RAB11FIP4Q86YS3 637 aa18.78■□□□□ 0.6
NPM1-201ENST00000296930 RTEL1Q9NZ71 1219 aa18.78■□□□□ 0.6
NPM1-201ENST00000296930 CYP46A1Q9Y6A2 500 aa18.78■□□□□ 0.6
NPM1-201ENST00000296930 BECN1Q14457 450 aa18.77■□□□□ 0.6
NPM1-201ENST00000296930 CCDC82Q8N4S0 544 aa18.77■□□□□ 0.6
NPM1-201ENST00000296930 IL27Q8NEV9 243 aa18.77■□□□□ 0.6
NPM1-201ENST00000296930 H3BRB1 525 aa18.76■□□□□ 0.59
NPM1-201ENST00000296930 RPS6KB1P23443 525 aa18.76■□□□□ 0.59
NPM1-201ENST00000296930 SEMA3FQ13275 785 aa18.76■□□□□ 0.59
NPM1-201ENST00000296930 PPP2R2DQ66LE6 453 aa18.76■□□□□ 0.59
NPM1-201ENST00000296930 APOA5Q6Q788 366 aa18.76■□□□□ 0.59
NPM1-201ENST00000296930 CYFIP1Q7L576 1253 aa18.76■□□□□ 0.59
NPM1-201ENST00000296930 DHX32Q7L7V1 743 aaKnown RBP18.76■□□□□ 0.59
NPM1-201ENST00000296930 NLRX1Q86UT6 975 aa18.76■□□□□ 0.59
NPM1-201ENST00000296930 HSCBQ8IWL3 235 aa18.76■□□□□ 0.59
NPM1-201ENST00000296930 SENP7Q9BQF6 1050 aa18.76■□□□□ 0.59
NPM1-201ENST00000296930 TUT1Q9H6E5 874 aaKnown RBP18.76■□□□□ 0.59
NPM1-201ENST00000296930 BCAS3Q9H6U6 928 aa18.76■□□□□ 0.59
NPM1-201ENST00000296930 RBM28Q9NW13 759 aaKnown RBP18.76■□□□□ 0.59
NPM1-201ENST00000296930 LGALS2P05162 132 aa18.76■□□□□ 0.59
NPM1-201ENST00000296930 MYOGP15173 224 aa18.76■□□□□ 0.59
NPM1-201ENST00000296930 EXOSC10Q01780 885 aaKnown RBP18.76■□□□□ 0.59
NPM1-201ENST00000296930 hCG_1642624A0A1W2PR95 340 aa18.75■□□□□ 0.59
NPM1-201ENST00000296930 CXCL10P02778 98 aa18.75■□□□□ 0.59
NPM1-201ENST00000296930 ZNF200P98182 395 aaPredicted RBP18.75■□□□□ 0.59
NPM1-201ENST00000296930 GPNMBQ14956 572 aa18.75■□□□□ 0.59
NPM1-201ENST00000296930 TRIM71Q2Q1W2 868 aaKnown RBP18.75■□□□□ 0.59
NPM1-201ENST00000296930 GIMAP8Q8ND71 665 aaPredicted RBP18.75■□□□□ 0.59
NPM1-201ENST00000296930 GPR20Q99678 358 aa18.75■□□□□ 0.59
NPM1-201ENST00000296930 KAT6AQ92794 2004 aa18.75■□□□□ 0.59
NPM1-201ENST00000296930 C17orf102A2RUQ5 167 aa18.74■□□□□ 0.59
NPM1-201ENST00000296930 HMGB1P09429 215 aaKnown RBP18.74■□□□□ 0.59
NPM1-201ENST00000296930 KCNJ6P48051 423 aa18.74■□□□□ 0.59
NPM1-201ENST00000296930 CNKSR3Q6P9H4 555 aa18.74■□□□□ 0.59
NPM1-201ENST00000296930 HEATR3Q7Z4Q2 680 aa18.74■□□□□ 0.59
NPM1-201ENST00000296930 SERINC5Q86VE9 423 aa18.74■□□□□ 0.59
NPM1-201ENST00000296930 GPRASP2Q96D09 838 aa18.74■□□□□ 0.59
NPM1-201ENST00000296930 CDHR1Q96JP9 859 aa18.74■□□□□ 0.59
NPM1-201ENST00000296930 TCEANC2Q96MN5 208 aa18.74■□□□□ 0.59
NPM1-201ENST00000296930 PDRG1Q9NUG6 133 aa18.74■□□□□ 0.59
NPM1-201ENST00000296930 SPDYE3A6NKU9 549 aa18.73■□□□□ 0.59
NPM1-201ENST00000296930 KIF28PB7ZC32 967 aa18.73■□□□□ 0.59
NPM1-201ENST00000296930 K7ELQ4 463 aaPredicted RBP18.73■□□□□ 0.59
NPM1-201ENST00000296930 ZBTB43O43298 467 aa18.73■□□□□ 0.59
NPM1-201ENST00000296930 NBNO60934 754 aa18.73■□□□□ 0.59
NPM1-201ENST00000296930 AK2P54819 239 aa18.73■□□□□ 0.59
NPM1-201ENST00000296930 HIC1Q14526 733 aa18.73■□□□□ 0.59
NPM1-201ENST00000296930 ZNF618Q5T7W0 954 aa18.73■□□□□ 0.59
NPM1-201ENST00000296930 HERC6Q8IVU3 1022 aa18.73■□□□□ 0.59
NPM1-201ENST00000296930 ATP6V0A1Q93050 837 aa18.73■□□□□ 0.59
NPM1-201ENST00000296930 CNTNAP5Q8WYK1 1306 aa18.73■□□□□ 0.59
NPM1-201ENST00000296930 PTPRSQ13332 1948 aa18.73■□□□□ 0.59
NPM1-201ENST00000296930 CA3P07451 260 aa18.73■□□□□ 0.59
NPM1-201ENST00000296930 SMIM10L2AP0DMW4 78 aa18.73■□□□□ 0.59
NPM1-201ENST00000296930 SMIM10L2BP0DMW5 78 aa18.73■□□□□ 0.59
NPM1-201ENST00000296930 HOXC8P31273 242 aa18.73■□□□□ 0.59
NPM1-201ENST00000296930 ADGRE1Q14246 886 aa18.73■□□□□ 0.59
NPM1-201ENST00000296930 UBE2SQ16763 222 aa18.73■□□□□ 0.59
NPM1-201ENST00000296930 RTN1Q16799 776 aa18.73■□□□□ 0.59
NPM1-201ENST00000296930 TEX2Q8IWB9 1127 aa18.73■□□□□ 0.59
NPM1-201ENST00000296930 USP38Q8NB14 1042 aa18.73■□□□□ 0.59
NPM1-201ENST00000296930 WNT8BQ93098 351 aa18.73■□□□□ 0.59
NPM1-201ENST00000296930 COL25A1Q9BXS0 654 aaPredicted RBP18.73■□□□□ 0.59
NPM1-201ENST00000296930 EHMT1Q9H9B1 1298 aa18.73■□□□□ 0.59
NPM1-201ENST00000296930 ZNF215Q9UL58 517 aaPredicted RBP18.73■□□□□ 0.59
NPM1-201ENST00000296930 TRANK1O15050 2925 aa18.72■□□□□ 0.59
NPM1-201ENST00000296930 EFCAB14O75071 495 aa18.72■□□□□ 0.59
NPM1-201ENST00000296930 IGFBP4P22692 258 aa18.72■□□□□ 0.59
NPM1-201ENST00000296930 WDR5P61964 334 aaKnown RBP18.72■□□□□ 0.59
NPM1-201ENST00000296930 TRAF7Q6Q0C0 670 aa18.72■□□□□ 0.59
NPM1-201ENST00000296930 RNPEPQ9H4A4 650 aa18.72■□□□□ 0.59
NPM1-201ENST00000296930 BRPF3Q9ULD4 1205 aa18.72■□□□□ 0.59
NPM1-201ENST00000296930 EMSYQ7Z589 1322 aa18.72■□□□□ 0.59
NPM1-201ENST00000296930 ABHD14A-ACY1A0A1B0GW23 586 aa18.71■□□□□ 0.59
NPM1-201ENST00000296930 GNAT1P11488 350 aa18.71■□□□□ 0.59
NPM1-201ENST00000296930 MCM2P49736 904 aa18.71■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 50.2 ms