RNA–Protein interactions for RNA: ENST00000296255.7

RPN1-201, Transcript of ribophorin I, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RPN1, Length 2,314 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPN1-201ENST00000296255 TRIM66O15016 1216 aa18.39■□□□□ 0.53
RPN1-201ENST00000296255 BBOX1O75936 387 aa18.39■□□□□ 0.53
RPN1-201ENST00000296255 SERPINB2P05120 415 aa18.39■□□□□ 0.53
RPN1-201ENST00000296255 MRPL12P52815 198 aaKnown RBP18.39■□□□□ 0.53
RPN1-201ENST00000296255 CACNB1Q02641 598 aaPredicted RBP18.39■□□□□ 0.53
RPN1-201ENST00000296255 TDRD12Q587J7 1177 aaKnown RBP18.39■□□□□ 0.53
RPN1-201ENST00000296255 CERS5Q8N5B7 392 aa18.39■□□□□ 0.53
RPN1-201ENST00000296255 GOLGA6L1Q8N7Z2 621 aa18.39■□□□□ 0.53
RPN1-201ENST00000296255 MS4A14Q96JA4 679 aa18.39■□□□□ 0.53
RPN1-201ENST00000296255 NOX5Q96PH1 765 aa18.39■□□□□ 0.53
RPN1-201ENST00000296255 PSTPIP2Q9H939 334 aa18.39■□□□□ 0.53
RPN1-201ENST00000296255 RBM12Q9NTZ6 932 aaKnown RBP18.39■□□□□ 0.53
RPN1-201ENST00000296255 KIAA1024Q9UPX6 916 aa18.39■□□□□ 0.53
RPN1-201ENST00000296255 GYS1P13807 737 aa18.38■□□□□ 0.53
RPN1-201ENST00000296255 POLR2FP61218 127 aaKnown RBP18.38■□□□□ 0.53
RPN1-201ENST00000296255 CCDC181Q5TID7 509 aa18.38■□□□□ 0.53
RPN1-201ENST00000296255 SFMBT2Q5VUG0 894 aa18.38■□□□□ 0.53
RPN1-201ENST00000296255 ARHGAP27Q6ZUM4 889 aa18.38■□□□□ 0.53
RPN1-201ENST00000296255 TRIM59Q8IWR1 403 aa18.38■□□□□ 0.53
RPN1-201ENST00000296255 RNF10Q8N5U6 811 aaKnown RBP18.38■□□□□ 0.53
RPN1-201ENST00000296255 RUBCNQ92622 972 aa18.38■□□□□ 0.53
RPN1-201ENST00000296255 SYN2Q92777 582 aaPredicted RBP18.38■□□□□ 0.53
RPN1-201ENST00000296255 SERPINB13Q9UIV8 391 aa18.38■□□□□ 0.53
RPN1-201ENST00000296255 LTBP1Q14766 1721 aa18.38■□□□□ 0.53
RPN1-201ENST00000296255 ZBTB5O15062 677 aa18.38■□□□□ 0.53
RPN1-201ENST00000296255 MARCH6O60337 910 aa18.38■□□□□ 0.53
RPN1-201ENST00000296255 SERPING1P05155 500 aa18.38■□□□□ 0.53
RPN1-201ENST00000296255 SLC9C1Q4G0N8 1177 aa18.38■□□□□ 0.53
RPN1-201ENST00000296255 SCFD1Q8WVM8 642 aa18.38■□□□□ 0.53
RPN1-201ENST00000296255 CEP63Q96MT8 703 aa18.38■□□□□ 0.53
RPN1-201ENST00000296255 KCTD10Q9H3F6 313 aa18.38■□□□□ 0.53
RPN1-201ENST00000296255 POTEB3A0JP26 581 aa18.37■□□□□ 0.53
RPN1-201ENST00000296255 POTECB2RU33 542 aa18.37■□□□□ 0.53
RPN1-201ENST00000296255 RIMBP2O15034 1052 aa18.37■□□□□ 0.53
RPN1-201ENST00000296255 PLA2G4BP0C869 781 aa18.37■□□□□ 0.53
RPN1-201ENST00000296255 GCFC2P16383 781 aaKnown RBP18.37■□□□□ 0.53
RPN1-201ENST00000296255 POTEBQ6S5H4 581 aa18.37■□□□□ 0.53
RPN1-201ENST00000296255 MXD3Q9BW11 206 aa18.37■□□□□ 0.53
RPN1-201ENST00000296255 PLEKHA4Q9H4M7 779 aa18.37■□□□□ 0.53
RPN1-201ENST00000296255 STIM2Q9P246 746 aa18.37■□□□□ 0.53
RPN1-201ENST00000296255 THSD7AQ9UPZ6 1657 aa18.37■□□□□ 0.53
RPN1-201ENST00000296255 USP17L15C9J2P7 530 aa18.37■□□□□ 0.53
RPN1-201ENST00000296255 USP17L13C9JLJ4 530 aa18.37■□□□□ 0.53
RPN1-201ENST00000296255 USP17L11C9JVI0 530 aa18.37■□□□□ 0.53
RPN1-201ENST00000296255 USP17L18D6R9N7 530 aa18.37■□□□□ 0.53
RPN1-201ENST00000296255 USP17L22D6RA61 530 aa18.37■□□□□ 0.53
RPN1-201ENST00000296255 USP17L17D6RBQ6 530 aa18.37■□□□□ 0.53
RPN1-201ENST00000296255 USP17L19D6RCP7 530 aa18.37■□□□□ 0.53
RPN1-201ENST00000296255 USP17L20D6RJB6 530 aa18.37■□□□□ 0.53
RPN1-201ENST00000296255 HOXA10P31260 410 aaPredicted RBP18.37■□□□□ 0.53
RPN1-201ENST00000296255 MARSP56192 900 aaKnown RBP18.37■□□□□ 0.53
RPN1-201ENST00000296255 USP17L24Q0WX57 530 aa18.37■□□□□ 0.53
RPN1-201ENST00000296255 USP17L6PQ6QN14 398 aa18.37■□□□□ 0.53
RPN1-201ENST00000296255 GPBP1Q86WP2 473 aa18.37■□□□□ 0.53
RPN1-201ENST00000296255 NT5C3AQ9H0P0 336 aa18.37■□□□□ 0.53
RPN1-201ENST00000296255 BMP2KQ9NSY1 1161 aaPredicted RBP18.37■□□□□ 0.53
RPN1-201ENST00000296255 ATP6V0A2Q9Y487 856 aa18.37■□□□□ 0.53
RPN1-201ENST00000296255 MYH4Q9Y623 1939 aa18.36■□□□□ 0.53
RPN1-201ENST00000296255 ADAMTSL1Q8N6G6 1762 aa18.36■□□□□ 0.53
RPN1-201ENST00000296255 TSEN2Q8NCE0 465 aaKnown RBP18.36■□□□□ 0.53
RPN1-201ENST00000296255 NUCKS1Q9H1E3 243 aaKnown RBP18.36■□□□□ 0.53
RPN1-201ENST00000296255 USP40Q9NVE5 1235 aa18.36■□□□□ 0.53
RPN1-201ENST00000296255 SWAP70Q9UH65 585 aa18.36■□□□□ 0.53
RPN1-201ENST00000296255 UTP18Q9Y5J1 556 aaKnown RBP eCLIP18.36■□□□□ 0.53
RPN1-201ENST00000296255 KDM3AQ9Y4C1 1321 aa18.36■□□□□ 0.53
RPN1-201ENST00000296255 GREB1LQ9C091 1923 aaPredicted RBP18.36■□□□□ 0.53
RPN1-201ENST00000296255 C10orf71Q711Q0 1435 aa18.36■□□□□ 0.53
RPN1-201ENST00000296255 CYP11B2P19099 503 aa18.35■□□□□ 0.53
RPN1-201ENST00000296255 STAT3P40763 770 aa18.35■□□□□ 0.53
RPN1-201ENST00000296255 PAFAH1B1P43034 410 aa18.35■□□□□ 0.53
RPN1-201ENST00000296255 NAP1L1P55209 391 aaKnown RBP18.35■□□□□ 0.53
RPN1-201ENST00000296255 NAB2Q15742 525 aa18.35■□□□□ 0.53
RPN1-201ENST00000296255 ARSHQ5FYA8 562 aa18.35■□□□□ 0.53
RPN1-201ENST00000296255 HERC4Q5GLZ8 1057 aaPredicted RBP18.35■□□□□ 0.53
RPN1-201ENST00000296255 GPATCH4Q5T3I0 446 aaKnown RBP18.35■□□□□ 0.53
RPN1-201ENST00000296255 CCDC65Q8IXS2 484 aa18.35■□□□□ 0.53
RPN1-201ENST00000296255 TBC1D5Q92609 795 aa18.35■□□□□ 0.53
RPN1-201ENST00000296255 KCNMB3Q9NPA1 279 aa18.35■□□□□ 0.53
RPN1-201ENST00000296255 ATAD5Q96QE3 1844 aa18.35■□□□□ 0.53
RPN1-201ENST00000296255 A0A087X0T9 212 aa18.35■□□□□ 0.53
RPN1-201ENST00000296255 SHOX2O60902 331 aaPredicted RBP18.35■□□□□ 0.53
RPN1-201ENST00000296255 MED24O75448 989 aa18.35■□□□□ 0.53
RPN1-201ENST00000296255 PALMO75781 387 aa18.35■□□□□ 0.53
RPN1-201ENST00000296255 FAM228BP0C875 321 aa18.35■□□□□ 0.53
RPN1-201ENST00000296255 KLRC1P26715 233 aa18.35■□□□□ 0.53
RPN1-201ENST00000296255 ZC3H3Q8IXZ2 948 aaKnown RBP18.35■□□□□ 0.53
RPN1-201ENST00000296255 C10orf67Q8IYJ2 551 aa18.35■□□□□ 0.53
RPN1-201ENST00000296255 SH3GL2Q99962 352 aa18.35■□□□□ 0.53
RPN1-201ENST00000296255 TSPYL1Q9H0U9 437 aa18.35■□□□□ 0.53
RPN1-201ENST00000296255 RSPH14Q9UHP6 348 aa18.35■□□□□ 0.53
RPN1-201ENST00000296255 GOLGA6CA6NDK9 693 aa18.34■□□□□ 0.53
RPN1-201ENST00000296255 MPHOSPH10O00566 681 aaKnown RBP18.34■□□□□ 0.53
RPN1-201ENST00000296255 GNA14O95837 355 aa18.34■□□□□ 0.53
RPN1-201ENST00000296255 GOLGA6DP0CG33 693 aa18.34■□□□□ 0.53
RPN1-201ENST00000296255 ADRA2BP18089 450 aa18.34■□□□□ 0.53
RPN1-201ENST00000296255 TNFRSF8P28908 595 aa18.34■□□□□ 0.53
RPN1-201ENST00000296255 ARID5AQ03989 594 aa18.34■□□□□ 0.53
RPN1-201ENST00000296255 C8orf74Q6P047 294 aa18.34■□□□□ 0.53
RPN1-201ENST00000296255 FAM76AQ8TAV0 307 aa18.34■□□□□ 0.53
RPN1-201ENST00000296255 PACSIN1Q9BY11 444 aa18.34■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms